DY262499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: WIPI4_HUMAN (WD repeat domain phosphoinositide-interacting protein 4 OS=Homo sapiens GN=WDR45 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.026e-14 Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 574 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWD------DHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHR 888 S+ +NQD CF G RIYN EP E D + G +VEML R N+LALVG G + ++ V+IWD D + + + EF F V SV++ ++IV+VL++R Sbjct: 11 SLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRSNLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVLKNR 122
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: HSV2_SCHPO (SVP1-like protein 2 OS=Schizosaccharomyces pombe GN=hsv2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.285e-14 Identity = 35/91 (38.46%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 574 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSV 846 +VS NQD C + G++I+ P K +R GG IV+MLFR N+L LVG G N +Y P K+I+WDD + R + E +++ + Sbjct: 6 TVSLNQDASCMSVALDTGYKIFQINPLKLRAQRQFNDGGLSIVKMLFRSNVLLLVGGGGNPKYAPNKLIVWDDVKERPVKELELNFEIKGI 96
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_PICPA (Autophagy-related protein 18 OS=Pichia pastoris GN=ATG18 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.587e-14 Identity = 39/115 (33.91%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 538 TGFSDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLE 882 TG + V + ++NQD C + G G++I+N EPF + L IVEMLF +++A+VG G+ P K+ +++ + I E F + + +VK++RER+VV+LE Sbjct: 12 TGNAQVTHESINFANFNQDSTCVSVGYQSGYKIFNVEPFTKCL--SLADTSIGIVEMLFSSSLVAIVGLGELPDSSPRKLKVFNTKRRSIICELTFPTSILAVKMNRERMVVLLE 124 HSP 2 Score: 27.335 bits (59), Expect = 2.587e-14 Identity = 12/32 (37.50%), Postives = 20/32 (62.50%), Query Frame = 3 Query: 888 IYVYSFVNLKLLHQIETLANLKGALLSFS*SE 983 IY+Y +++LH IET +N +G + S +E Sbjct: 127 IYIYDINTMRILHTIETPSNPEGLIALSSSTE 158
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: WIPI4_RAT (WD repeat domain phosphoinositide-interacting protein 4 OS=Rattus norvegicus GN=Wdr45 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 3.898e-14 Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = 1 Query: 574 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWD------DHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHR 888 S+ +NQD CF G RIYN EP E D + G +VEML R N+LALVG G + ++ V+IWD D + + + EF F V +V++ ++IV+VL +R Sbjct: 11 SLHFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSVGLVEMLHRSNLLALVGGGSSPKFSEISVLIWDDAREGKDSKDKLVLEFTFTKPVLAVRMRHDKIVIVLRNR 122
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: WIPI4_MOUSE (WD repeat domain phosphoinositide-interacting protein 4 OS=Mus musculus GN=Wdr45 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 3.898e-14 Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = 1 Query: 574 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWD------DHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHR 888 S+ +NQD CF G RIYN EP E D + G +VEML R N+LALVG G + ++ V+IWD D + + + EF F V +V++ ++IV+VL +R Sbjct: 11 SLHFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSVGLVEMLHRSNLLALVGGGSSPKFSEISVLIWDDAREGKDSKDKLVLEFTFTKPVLAVRMRHDKIVIVLRNR 122
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: HSV2_YEAST (SVP1-like protein 2 OS=Saccharomyces cerevisiae GN=HSV2 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.091e-14 Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 565 ELISVSWNQDYGCFAAGTSCGFRIYNCEP--------FKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLEH 885 + +SVS+NQD CF+ GFRI+N +P FKE+ + G ML+R N +ALVG G ++ K+IIWDD + F S ++ V LSR IVVVLE+ Sbjct: 18 KFLSVSFNQDDSCFSVALENGFRIFNTDPLTSKLSKTFKESATNQSRGTGIGYTRMLYRTNYIALVGGGKRPRHALNKLIIWDDLLQKETITLKFMSSIKDVFLSRIHIVVVLEN 132
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: HSV2_PICAN (SVP1-like protein 2 OS=Pichia angusta GN=HSV2 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.935e-13 Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 559 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHRYM 894 E +++ ++NQD CFA GF++YN +P + +R + GG ++ ML R N +ALVG G ++P K+ IWDD + + F S + +V LSR IVVVL+++ + Sbjct: 14 EPAVLNAAFNQDQTCFAVCHESGFQVYNTDPMELRMKRTFSTNGGVGLIAMLHRTNYVALVGGGRQPRFPVNKLCIWDDLKKKPSIMLEFMSPILNVLLSRILIVVVLKNKVL 126
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_VANPO (Autophagy-related protein 18 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ATG18 PE=3 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 2.722e-13 Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 +++NQ C + T GF IYNC+PF + + + + IVEMLF ++LA+VG GD ++ + + I E F S + SVK+++ R+VV+L Sbjct: 12 INFNQTGSCISIATDDGFSIYNCDPFGKFYSQK----NYSIVEMLFSTSLLAVVGLGDQPALSQRRLTMINTKTYSIICEVTFPSAILSVKMNKSRLVVLL 108 HSP 2 Score: 30.0314 bits (66), Expect = 2.722e-13 Identity = 12/25 (48.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 888 IYVYSFVNLKLLHQIETLANLKGAL 962 IY+Y N++LLH IET +N G + Sbjct: 112 IYIYDINNMRLLHTIETTSNKLGII 136
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: HSV2_CANGA (SVP1-like protein 2 OS=Candida glabrata GN=HSV2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.300e-13 Identity = 43/114 (37.72%), Postives = 58/114 (50.88%), Query Frame = 1 Query: 559 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKS-----GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLEH 885 E SV++NQD CF+ GF +YN P ++ K G +ML+R N +ALVG G +Y +V+IWDD Q + F S VR V LSR +VV LE+ Sbjct: 14 ETGFASVTFNQDESCFSCANEQGFLVYNTFPLSLKLTKEFKQTPERGAGIGYSQMLYRTNYIALVGGGQRPRYSLNRVVIWDDLQQKESFSLKFMSIVRKVVLSRVHLVVALEN 127
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: HSV2_ASHGO (SVP1-like protein 2 OS=Ashbya gossypii GN=HSV2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.310e-13 Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 571 ISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIV---EMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 + V++NQD CF+ T GF IYN +P + + +R G + ML+R N + LVG G + ++ K+ IWDD Q R F S V + LSR+ IVVVL Sbjct: 19 LHVNFNQDQECFSCATEKGFEIYNTDPIQCSVKRRFSHNGMSGIGYTRMLYRTNYIGLVGGGASPRFSTNKIAIWDDIQQRDSVSIRFNSPVHELFLSRQYIVVVL 124 The following BLAST results are available for this feature:
BLAST of DY262499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262499 ID=DY262499; Name=DY262499; organism=Citrus clementina; type=EST; length=1240bpback to top |