DY262499

Overview
NameDY262499
Unique NameDY262499
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1240
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: WIPI4_DANRE (WD repeat domain phosphoinositide-interacting protein 4 OS=Danio rerio GN=wdr45 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.629e-13
Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = 1
Query:  574 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWD------DHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHR 888
            S+ +NQD  CF      G RIYN EP  E    D +  G   +  ML R N+LA+VG G N ++    V+IWD      D + + + EF F   V +V++  ++I+++L++R
Sbjct:    9 SLQFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSIALCSMLHRSNLLAVVGGGVNPKFSEISVLIWDDAREVRDPKDKLVLEFTFTKPVLAVRMRHDKIIIILKNR 120          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_MAGGR (Autophagy-related protein 18 OS=Magnaporthe grisea GN=ATG18 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.351e-13
Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 1
Query:  577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLE 882
            +++NQD+GC A GTS GFRIY+ EPF + F  +   G   I+EMLF  +++AL+         P  +II +  +   I E  F S V +V+L+R+R+ VVLE
Sbjct:    9 ITFNQDHGCLAVGTSRGFRIYHTEPFSKIFSSE--DGNVSIIEMLFSTSLVALI-------LSPRHLIIQNTKRGSVICELTFPSAVLAVRLNRKRLAVVLE 101          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_ASPTN (Autophagy-related protein 18 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg18 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.808e-13
Identity = 38/102 (37.25%), Postives = 61/102 (59.80%), Query Frame = 1
Query:  577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLE 882
            V++NQDY   A  TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R+R+V+VLE
Sbjct:    6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLE 98          

HSP 2 Score: 26.1794 bits (56), Expect = 7.808e-13
Identity = 18/50 (36.00%), Postives = 25/50 (50.00%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKG--ALLSFS*SEYLRVGLPGSSTGNGFH 1031
            IY+Y    +KLL+ IET  N     AL   S + YL   LP  +  + F+
Sbjct:  101 IYLYDIQTMKLLYTIETSPNPNAICALSPSSDNCYLAYPLPQKAPPSSFN 150          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_DEBHA (Autophagy-related protein 18 OS=Debaryomyces hansenii GN=ATG18 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.006e-12
Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHR 888
            +++NQD  C A G   G++I+NC+P      +  K+     +EML+  +++A+VG G+     P K+ I +  +   I E  F S +  VKLS+ R++++LE +
Sbjct:   42 ITFNQDASCIALGLKNGYKIFNCKPNFGKCYQFKKNESIGKIEMLYCTSLIAIVGLGEEVGSSPRKLKIINTRRQSTICELIFPSTILQVKLSKSRMIILLEEQ 145          

HSP 2 Score: 28.1054 bits (61), Expect = 1.006e-12
Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKG 956
            IY+Y    +KLLH IET  N  G
Sbjct:  146 IYIYDVTTMKLLHTIETSPNGNG 168          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_PICST (Autophagy-related protein 18 OS=Pichia stipitis GN=ATG18 PE=3 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 1.306e-12
Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLEHR 888
            +++NQD  C A G + G++I+NC+P      +  K     I+EML+  ++LA+V  G+     P K+ I +  +   I +  F S +  VKL++ R++V+LE +
Sbjct:   44 ITFNQDASCIAVGLNNGYKIFNCKPKFGKCYQIRKEESVGIIEMLYCTSLLAIVALGEEPGSSPRKLKIVNTKRQTTICDLIFPSTILQVKLTKSRLIVLLEEQ 147          

HSP 2 Score: 28.1054 bits (61), Expect = 1.306e-12
Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKG 956
            IY+Y    +KLLH IET  N  G
Sbjct:  148 IYIYDITTMKLLHTIETSPNSIG 170          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_ASPNC (Autophagy-related protein 18 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg18 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.317e-12
Identity = 38/102 (37.25%), Postives = 61/102 (59.80%), Query Frame = 1
Query:  577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLE 882
            V++NQDY   A  TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R+R+V+VLE
Sbjct:    6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLE 98          

HSP 2 Score: 25.409 bits (54), Expect = 1.317e-12
Identity = 19/50 (38.00%), Postives = 25/50 (50.00%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKGALLSFS*SE---YLRVGLPGSSTGNGF 1028
            IY+Y    +KLL+ IET  N   AL + S S    YL   LP  +  + F
Sbjct:  101 IYLYDIQTMKLLYTIETSPN-PNALCALSPSSDNCYLAYPLPQKAPPSTF 149          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_EMENI (Autophagy-related protein 18 OS=Emericella nidulans GN=atg18 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.707e-12
Identity = 38/102 (37.25%), Postives = 61/102 (59.80%), Query Frame = 1
Query:  577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLE 882
            V++NQDY   A  TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R+R+V+VLE
Sbjct:    6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKDGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLE 98          

HSP 2 Score: 25.0238 bits (53), Expect = 1.707e-12
Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKG 956
            IY+Y    +KLL+ IET  N  G
Sbjct:  101 IYLYDIQTMKLLYTIETSPNPNG 123          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_NEOFI (Autophagy-related protein 18 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg18 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.708e-12
Identity = 38/102 (37.25%), Postives = 61/102 (59.80%), Query Frame = 1
Query:  577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLE 882
            V++NQDY   A  TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R+R+V+VLE
Sbjct:    6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLE 98          

HSP 2 Score: 25.0238 bits (53), Expect = 1.708e-12
Identity = 17/50 (34.00%), Postives = 25/50 (50.00%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKG--ALLSFS*SEYLRVGLPGSSTGNGFH 1031
            IY+Y    +KLL+ I+T  N     AL   S + YL   LP  +  + F+
Sbjct:  101 IYLYDIQTMKLLYTIQTSPNPNAICALSPSSDNCYLAYPLPQKAPPSSFN 150          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_ASPOR (Autophagy-related protein 18 OS=Aspergillus oryzae GN=atg18 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.884e-12
Identity = 37/102 (36.27%), Postives = 61/102 (59.80%), Query Frame = 1
Query:  577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLE 882
            V++NQDY   A  T+ GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R+R+V+VLE
Sbjct:    6 VTFNQDYSYLAVATAKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLE 98          

HSP 2 Score: 25.409 bits (54), Expect = 2.884e-12
Identity = 18/49 (36.73%), Postives = 23/49 (46.94%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKG--ALLSFS*SEYLRVGLPGSSTGNGF 1028
            IY+Y    +KLL+ IET  N     AL   S + YL   LP  +    F
Sbjct:  101 IYLYDIQTMKLLYTIETSPNPSAICALSPSSDNCYLAYPLPHKAPPTSF 149          
BLAST of DY262499 vs. ExPASy Swiss-Prot
Match: ATG18_ASPCL (Autophagy-related protein 18 OS=Aspergillus clavatus GN=atg18 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.744e-12
Identity = 38/102 (37.25%), Postives = 61/102 (59.80%), Query Frame = 1
Query:  577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVLE 882
            V++NQDY   A  TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R+R+V+VLE
Sbjct:    6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKEGHIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLE 98          

HSP 2 Score: 24.6386 bits (52), Expect = 3.744e-12
Identity = 17/49 (34.69%), Postives = 24/49 (48.98%), Query Frame = 3
Query:  888 IYVYSFVNLKLLHQIETLANLKG--ALLSFS*SEYLRVGLPGSSTGNGF 1028
            IY+Y    +KLL+ I+T  N     AL   S + YL   LP  +  + F
Sbjct:  101 IYLYDIQTMKLLYTIQTSPNPNAICALSPSSDNCYLAYPLPQKAPPSSF 149          
The following BLAST results are available for this feature:
BLAST of DY262499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
WIPI4_DANRE5.629e-1334.82WD repeat domain phosphoinositide-interacting prot... [more]
ATG18_MAGGR7.351e-1341.18Autophagy-related protein 18 OS=Magnaporthe grisea... [more]
ATG18_ASPTN7.808e-1337.25Autophagy-related protein 18 OS=Aspergillus terreu... [more]
ATG18_DEBHA1.006e-1231.73Autophagy-related protein 18 OS=Debaryomyces hanse... [more]
ATG18_PICST1.306e-1231.73Autophagy-related protein 18 OS=Pichia stipitis GN... [more]
ATG18_ASPNC1.317e-1237.25Autophagy-related protein 18 OS=Aspergillus niger ... [more]
ATG18_EMENI1.707e-1237.25Autophagy-related protein 18 OS=Emericella nidulan... [more]
ATG18_NEOFI1.708e-1237.25Autophagy-related protein 18 OS=Neosartorya fische... [more]
ATG18_ASPOR2.884e-1236.27Autophagy-related protein 18 OS=Aspergillus oryzae... [more]
ATG18_ASPCL3.744e-1237.25Autophagy-related protein 18 OS=Aspergillus clavat... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AF01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262499 ID=DY262499; Name=DY262499; organism=Citrus clementina; type=EST; length=1240bp
CTCTCACAAAGCGAAAGAGAAAATTTGATCTGATGATCATTAATTTGATT
TCTCATATCACAGCATCAAGGTTAGTGTCTCTATTCGATTTCTGCTTTCT
GTACTCTTCGATTAAATCACTTTATTTGTTTGGAATTATATAATATAGTA
AGGAATCAGGAGGCCCGACTGATATTTTCACGATCGCAAATTTCCCGTTT
CTGATCATTGATCACTGGCTGCTGCCTGCTGGTGATTAGATGCATTAACT
CTACATGCTATGAGAGATACAGAAGTTTGCAGAATCTGTGGGAATTAGCG
TATTTGTATGACATTTCATAATATTGTGTGAATACAGGGGGTGCCACTGA
AATTATTCACAATCGAGAAGATTTTCATATTTGATTGCTGCTGCTGCTGC
TGCTGCTGCTGACCCTTTCTTCGTCCCACATGACTTCAACTGTTTCGACA
TCTCGAGAAATTCTTCCACCGGGCCCCTTTGGATCCCCCAATGCTGGGGC
TTCGGCTTCGGCTTTGGCTTCATTTGGCCACCCGCAAACGGGGTTCAGTG
ATGTTGACGAAATTGAGTTGATCTCTGTGTCTTGGAACCAGGACTATGGT
TGTTTTGCCGCTGGAACTAGTTGTGGGTTTCGAATTTATAATTGTGAGCC
GTTTAAGGAAACTTTTAGACGTGATTTGAAAAGTGGTGGGTTTAGGATTG
TTGAGATGTTGTTTCGTTGTAATATATTGGCACTCGTTGGTGCTGGGGAT
AATTCTCAGTATCCTCCTACTAAAGTTATTATTTGGGATGATCATCAGAG
CAGGTGCATTGGTGAGTTTGCGTTTAGGTCTGATGTTCGCTCTGTGAAAT
TGAGTAGGGAACGAATTGTGGTTGTTCTTGAGCATAGATATATGTTTATA
GTTTTGTTAATCTCAAGTTGCTTCATCAGATTGAGACTCTCGCGAATCTG
AAGGGGGCTTTGTTGTCTTTCTCATAATCCGAGTACCTCCGTGTTGGCTT
GCCCGGGTCCTCAACGGGGAACGGTTTCCATTTGACAATTTGGGGCTCAA
TATGAAAAAGCTAAAAAATGGCCCAGGATTTTCCAATGGGGTGCCTTTAC
CCTCAAATTGGAAGGGGCGGCTTTTTTGCCACCTGGCAAAAACCCAGGGG
GCCATTTTGTAAAAAAAAATTTTTAAACACCGGGGGGGAGGGGGACTCCC
CTTTGGCCAGAAAAGGTTCCAAAAAAAAGGGTGTGTAACA
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