DY262550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_PSEMY (Ketol-acid reductoisomerase OS=Pseudomonas mendocina (strain ymp) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.235e-18 Identity = 69/217 (31.80%), Postives = 110/217 (50.69%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPK-NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ +IG+GSQG AQA NL+DS + V +GLRKGS + A+A A G + D+ ++ +DLV++L D Q Y+ ++PN P+ ++ VI + PK G +VR +V+G GI AV+QD G A NVAL ++ +G T TT + E ++D+FGE+ L G +V++ F+ ++ Sbjct: 18 KVAIIGYGSQGHAQACNLKDS------GVDVTIGLRKGSATVAKAEAHGLK-----VTDVASAVAAADLVMILTPDEFQGQLYKNE---IEPNIKKGATLAFSHGFAIHYNQVVPRADLDVIMIAPKAPGHTVRTEFVKG-----GGIPDLIAVYQDASGNAKNVALSYASGVGGGRTGIIETTFKDETETDLFGEQAVLCGGTVELVKAGFETLVE 215
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_HERA2 (Ketol-acid reductoisomerase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.235e-18 Identity = 67/216 (31.02%), Postives = 107/216 (49.54%), Query Frame = 3 Query: 333 IGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNY-EKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 + +IG+GSQG A A NL+DS + V VGL +GS+S A+A AAG + + E +D+V++L+ D QA Y ++I +KPN+ Q + P + V + PK G VR ++ +G G+ AV+QD G A AL + +G TT +E ++D+FGE+ L G V +V++ F+ ++ Sbjct: 20 VAIIGYGSQGHAHALNLKDS------GVQVVVGLHEGSKSKAKAEAAGLQ-----VLSVGEATKAADVVMVLVPDTTQAQLYSDEIAPNLKPNATLMFAHGFNIRYGQIVP---PAGVDVSLIAPKSPGHRVREVFE-----HGGGVPGLVAVYQDASGEALQNALAYGKGIGCARAGVLETTFAEETETDLFGEQAILCGGVSALVKAGFETLVE 216
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_HELPS (Ketol-acid reductoisomerase OS=Helicobacter pylori (strain Shi470) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.235e-18 Identity = 67/218 (30.73%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEK-IFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD-GRATNVALGWSVALGS--PFTFATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 Q+G+IG+G+QG AQA NLRD S + V++GL +GS S +A+A GF + ++ E + SDL++ L+ D + EK + +K I Q + PK + I V PKG G ++R Y++ + G+ A+ Q+ A VAL ++ A+G T+ ++E +SD+FGE+ L G + I+ F+ +K Sbjct: 20 QVGIIGYGAQGEAQALNLRD------SKVKVRIGLYQGSLSVPKAKAEGF-----EVLEVKELVQQSDLIMALLPDELHKEVLEKEVIPFLKEGQIVGFAHGFSVHFNQVV---LPKGVGAILVAPKGPGSALREEYLKNR-----GLYHLIAIEQESSKNNAKAVALSYAKAMGGGRMGVLETSFKEECESDLFGEQAVLCGGLEAIIRMGFETLIK 218
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_HAHCH (Ketol-acid reductoisomerase OS=Hahella chejuensis (strain KCTC 2396) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.235e-18 Identity = 69/217 (31.80%), Postives = 113/217 (52.07%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPK-NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ +IG+GSQG A A NL+D S + V VGLRKGS S+A+A AG + ++ E ++G+D+V++L D QA Y+ S ++PN P+ ++ VI + PK G +VR +V+ G GI A+ QD G A ++AL ++ +G T TT + E ++D+FGE+ L G +V++ F+ ++ Sbjct: 18 KVAIIGYGSQGHAHANNLKD------SGVDVCVGLRKGSGSWAKAENAGL-----AVKEVAEAVAGADVVMILTPDEFQAQLYK---SEIEPNLKSGATLAFAHGFSIHYNQIVPRADLDVIMIAPKAPGHTVRSEFVK-----GGGIPDLIAIFQDASGSAKDLALSYASGVGGGRTGIIETTFKDETETDLFGEQAVLCGGAVELVKAGFETLVE 215
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_CALS8 (Ketol-acid reductoisomerase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.235e-18 Identity = 68/211 (32.23%), Postives = 107/211 (50.71%), Query Frame = 3 Query: 333 IGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNY-EKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLF 956 + VIG+GSQG A A NLRDS I V VGL GS+S+A+A + G E +D++++L++D Q Y E I +K Q + P + VI + PKG G +VR Y +GK G+ + AVHQD G+A ++AL ++ +G+ TT ++E ++D+FGE+ L G + ++++ F Sbjct: 20 VAVIGFGSQGHAHALNLRDS------GINVVVGLYHGSKSWAKAESHGLKVMTAD-----EATKAADIIMILVNDEKQPKLYKESIEPNLKEGKAIAFAHGFNIHFGQIVP---PPYVDVIMIAPKGPGHTVRSQYEEGK-----GVPALVAVHQDYTGKALDIALAYAKGIGASRAGIILTTFKEETETDLFGEQAVLCGGLTELIKAGF 211
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_THEPX (Ketol-acid reductoisomerase OS=Thermoanaerobacter sp. (strain X514) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.613e-18 Identity = 70/217 (32.26%), Postives = 109/217 (50.23%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNY-EKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS--PFTFATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 +I +IG+GSQG A A NLRDS + V VGL +GS+S A G + + E +D++++LI D QA Y E I + Q + PKN+ V V PKG G VRR+Y +GK G+ + AV+QD G+A +AL ++ +G TT ++E ++D+FGE+ L G V ++++ F+ ++ Sbjct: 19 KIAIIGFGSQGHAHALNLRDS------GLDVIVGLYEGSKSKERAEKEGLR-----VYTVEEAAKVADIIMMLIPDEKQAKVYKESIEKNLTEGKALAFAHGFNIHFKQIVP---PKNVDVFMVAPKGPGHLVRRVYQEGK-----GVPNLVAVYQDYTGKAFEIALAYAKGIGGTRAGVIETTFKEETETDLFGEQAVLCGGVTELMKAGFETLVE 216
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_SULSY (Ketol-acid reductoisomerase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.613e-18 Identity = 68/219 (31.05%), Postives = 109/219 (49.77%), Query Frame = 3 Query: 333 IGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKN-ISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 + +IG+GSQG A A NLRD S I V +GL GSRS +A+A GF ++Y E +D++++L D Q Y+ S + PN G P + + V V PKG G VR +Y +GK G+ FAV+QD G+A +A+ ++ +G+ TT ++E ++D+FGE+ L G ++++ F+ ++ Sbjct: 20 VAIIGYGSQGHAHALNLRD------SGIKVIIGLLAGSRSIEKAKAEGF--------EVYSPDEAAKKADVIMILTPDTVQPALYQ---SAILPNLDEGNALAFAHGFNIHFGQIVPPSYVDVFLVAPKGPGHLVRWMYEEGK-----GVPGLFAVYQDFTGKAREIAMAYAKGIGATRAGLIETTFKEETETDLFGEQAVLCGGATALIKAGFETLIE 216
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_PSEPW (Ketol-acid reductoisomerase OS=Pseudomonas putida (strain W619) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.613e-18 Identity = 69/217 (31.80%), Postives = 110/217 (50.69%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPK-NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ +IG+GSQG AQA NL+DS + V VGLRKGS + A+A A G + D+ ++ +DLV++L D Q Y+ ++PN P+ ++ VI + PK G +VR +V+G GI A++QD G A NVAL ++ +G T TT + E ++D+FGE+ L G +V++ F+ ++ Sbjct: 18 KVAIIGYGSQGHAQACNLKDS------GVDVTVGLRKGSATVAKAEAHGLK-----VADVATAVAAADLVMILTPDEFQGALYKNE---IEPNIKKGATLAFSHGFSIHYNQVVPRADLDVIMIAPKAPGHTVRSEFVKG-----GGIPDLIAIYQDASGNAKNVALSYASGVGGGRTGIIETTFKDETETDLFGEQAVLCGGTVELVKAGFETLVE 215
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_PSEPK (Ketol-acid reductoisomerase OS=Pseudomonas putida (strain KT2440) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.613e-18 Identity = 69/217 (31.80%), Postives = 110/217 (50.69%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPK-NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ +IG+GSQG AQA NL+DS + V VGLRKGS + A+A A G + D+ ++ +DLV++L D Q Y+ ++PN P+ ++ VI + PK G +VR +V+G GI A++QD G A NVAL ++ +G T TT + E ++D+FGE+ L G +V++ F+ ++ Sbjct: 18 KVAIIGYGSQGHAQACNLKDS------GVDVTVGLRKGSATVAKAEAHGLK-----VADVATAVAAADLVMILTPDEFQGALYKNE---IEPNIKKGATLAFSHGFSIHYNQVVPRADLDVIMIAPKAPGHTVRSEFVKG-----GGIPDLIAIYQDASGNAKNVALSYASGVGGGRTGIIETTFKDETETDLFGEQAVLCGGTVELVKAGFETLVE 215
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_PSEPG (Ketol-acid reductoisomerase OS=Pseudomonas putida (strain GB-1) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.613e-18 Identity = 69/217 (31.80%), Postives = 110/217 (50.69%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPK-NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ +IG+GSQG AQA NL+DS + V VGLRKGS + A+A A G + D+ ++ +DLV++L D Q Y+ ++PN P+ ++ VI + PK G +VR +V+G GI A++QD G A NVAL ++ +G T TT + E ++D+FGE+ L G +V++ F+ ++ Sbjct: 18 KVAIIGYGSQGHAQACNLKDS------GVDVTVGLRKGSATVAKAEAHGLK-----VADVATAVAAADLVMILTPDEFQGALYKNE---IEPNIKKGATLAFSHGFSIHYNQVVPRADLDVIMIAPKAPGHTVRSEFVKG-----GGIPDLIAIYQDASGNAKNVALSYASGVGGGRTGIIETTFKDETETDLFGEQAVLCGGTVELVKAGFETLVE 215 The following BLAST results are available for this feature:
BLAST of DY262550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262550 ID=DY262550; Name=DY262550; organism=Citrus clementina; type=EST; length=1290bpback to top |