DY262550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_PSEP1 (Ketol-acid reductoisomerase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.613e-18 Identity = 69/217 (31.80%), Postives = 110/217 (50.69%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPK-NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ +IG+GSQG AQA NL+DS + V VGLRKGS + A+A A G + D+ ++ +DLV++L D Q Y+ ++PN P+ ++ VI + PK G +VR +V+G GI A++QD G A NVAL ++ +G T TT + E ++D+FGE+ L G +V++ F+ ++ Sbjct: 18 KVAIIGYGSQGHAQACNLKDS------GVDVTVGLRKGSATVAKAEAHGLK-----VADVATAVAAADLVMILTPDEFQGALYKNE---IEPNIKKGATLAFSHGFSIHYNQVVPRADLDVIMIAPKAPGHTVRSEFVKG-----GGIPDLIAIYQDASGNAKNVALSYASGVGGGRTGIIETTFKDETETDLFGEQAVLCGGTVELVKAGFETLVE 215
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_PSEE4 (Ketol-acid reductoisomerase OS=Pseudomonas entomophila (strain L48) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.613e-18 Identity = 68/217 (31.34%), Postives = 111/217 (51.15%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPK-NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ +IG+GSQG AQA NL+DS + V +GLRKGS + A+A A G + D+ ++ +DLV++L D Q Y++ ++PN P+ ++ VI + PK G +VR +V+G GI A++QD G A NVAL ++ +G T TT + E ++D+FGE+ L G +V++ F+ ++ Sbjct: 18 KVAIIGYGSQGHAQACNLKDS------GVDVTIGLRKGSATVAKAEAHGLK-----VTDVATAVAAADLVMILTPDEFQGQLYKQE---IEPNIKKGATLAFSHGFAIHYNQVVPRADLDVIMIAPKAPGHTVRSEFVKG-----GGIPDLIAIYQDASGNAKNVALSYASGVGGGRTGIIETTFKDETETDLFGEQAVLCGGTVELVKAGFETLVE 215
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_LACLA (Ketol-acid reductoisomerase OS=Lactococcus lactis subsp. lactis GN=ilvC PE=3 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 1.613e-18 Identity = 69/213 (32.39%), Postives = 106/213 (49.77%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIG-LDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFK 959 QI VIG+GSQG A AQNLRDS V +G+R G +SF +A+ GF ++ E ++ +D++++L D Q YE+ +KPN G + P+++ V V PK G VRR Y + G G + F HQ+ G A +A+ W+ +G TT ++E + D+FGE+ L G + +VE+ F+ Sbjct: 20 QIAVIGYGSQGHAHAQNLRDSGHN------VIIGVRHG-KSFDKAKEDGF-----ETFEVGEAVAKADVIMVLAPDELQQSIYEE---DIKPNLKAGSALGFAHGFNIHFGYIKVPEDVDVFMVAPKAPGHLVRRTYTE-----GFGTPALFVSHQNASGHAREIAMDWAKGIGCARVGIIETTFKEETEEDLFGEQAVLCGGLTALVEAGFE 212
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_HELP2 (Ketol-acid reductoisomerase OS=Helicobacter pylori (strain P12) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.613e-18 Identity = 70/218 (32.11%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEK-IFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD-GRATNVALGWSVALGS--PFTFATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 Q+G+IG+G+QG AQA NLRD S + V++GL +GS S ++A+ GF LG + E + SD+++ L+ D + EK + +K I Q + PK + I V PKG G ++R Y++ K G+ A+ Q+ A VAL ++ A+G T+ ++E +SD+FGE+ L G + IV F+ LK Sbjct: 20 QVGIIGYGTQGEAQALNLRD------SKVRVRIGLYQGSLSVSKAKKEGFE----VLG-VKELVQQSDVIMALLPDELHKEVLEKEVIPFLKEGQIIGFAHGFSVHFNQVV---IPKGVGAILVAPKGPGSALREEYLKNK-----GLYHLIAIEQESSKNNAKAVALSYAKAMGGGRMGVLETSFKEECESDLFGEQAVLCGGLEAIVRMGFETLLK 218
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_ACIC5 (Ketol-acid reductoisomerase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=ilvC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.613e-18 Identity = 68/212 (32.08%), Postives = 108/212 (50.94%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALG--SPFTFATTLEQEYKSDIFGERGFLLGAVHGIVESLFK 959 ++ +IG+GSQG A A L+DS E V+VGL SRS +A+ AG E GT+ ++ + +D++++L D AQA YE+ S + + PK++ V V PK G VR ++V+G G AVHQD G+A +AL ++ A+G TT ++E ++D+FGE+ L G +V++ F+ Sbjct: 19 KVAIIGYGSQGHAHALGLKDSGVE------VRVGLAPNSRSIEKAKKAGL--ETGTVAEV---AAWADVIMILAPDTAQAAIYEE--SIAPHLKAGKTLMFAHGFNIRYDAIQPPKDVDVSLVAPKAPGHRVREVFVEG-----GGTPGLVAVHQDASGQALALALAYAKAIGCTRAGVLETTFKEETETDLFGEQAVLCGGTAALVKAGFE 212
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_SYNY3 (Ketol-acid reductoisomerase OS=Synechocystis sp. (strain PCC 6803) GN=ilvC PE=1 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 2.106e-18 Identity = 65/211 (30.81%), Postives = 107/211 (50.71%), Query Frame = 3 Query: 333 IGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYE-KIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLF 956 + +IG+GSQG A A NL+D S + V VGL GS+S A+A AG + + E +DL+++L+ D Q YE +I + ++ Q + P ++ V+ PKG G VRR Y QG+ G+ + FAV+QD G+A + A+ ++ +G TT +E ++D+FGE+ L G + ++++ F Sbjct: 20 VAIIGYGSQGHAHALNLKD------SGVNVVVGLYSGSKSVAKAEGAGL-----KVLSVAEAAKAADLIMILLPDEVQKTVYEAEIAPNLVAGNVLLFAHGFNINFAQIVP---PADVDVVMAAPKGPGHLVRRTYEQGQ-----GVPALFAVYQDASGQARDYAMAYAKGIGGTRAGILETTFREETETDLFGEQVVLCGGLTALIKAGF 211
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_METS5 (Ketol-acid reductoisomerase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=ilvC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.106e-18 Identity = 69/216 (31.94%), Postives = 109/216 (50.46%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFA--TTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 +I V+G+GSQG A A NLRDS + V VGL + +S+ +A+A GFT + + + +D+V+ L+ D AQ Y + + + I + P N+ V V PKG GP VR YV+ G G+ AVHQ+ G+A AL + ALG A TT ++E ++D+ GE+ L+G V ++++ F+ ++ Sbjct: 22 KIAVLGYGSQGRAWALNLRDS------GLQVTVGLEREGKSWEQAKADGFTPKKTE-----DAVKDADVVIFLVPDMAQRLVYRERVQPYLREGMDLVFAHGFNIHYRLI--EPPSNVDVYMVAPKGPGPIVRDFYVK-----GGGVPVLVAVHQNHSGKALEKALAIAKALGGTRAGAIETTFKEETETDLIGEQTILVGGVMELMKAAFETLVE 219
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_LACLS (Ketol-acid reductoisomerase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=ilvC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.106e-18 Identity = 74/244 (30.33%), Postives = 121/244 (49.59%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIG-LDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLKRERMRIWLTEYPGRANKELIQNLLNQG 1052 +I VIG+GSQG A AQNLRDS D++ +G+R+G +SF A+ GF ++ E ++ +D++++L D Q YE+ +KPN G ++ P+++ V V PK G VRR + + G G + F HQ+ G A +A+ W+ +G TT ++E + D+FGE+ L G + +VE+ F+ L R L + +LI +L+ +G Sbjct: 20 KIAVIGYGSQGHAHAQNLRDS----GHDVI--IGVRQG-KSFDRAKEDGF-----ETFEVGEAVAKADVIMVLAPDELQQSIYEE---DIKPNLKSGSALGFAHGFNIHFGYIEVPEDVDVFMVAPKAPGHLVRRTFTE-----GFGTPALFVSHQNATGHAREIAMDWAKGIGCARVGIIETTFKEETEEDLFGEQAVLCGGLTALVEAGFET-LTEARYAGELAYFEVLHEMKLIVDLMYEG 242
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_LACLM (Ketol-acid reductoisomerase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=ilvC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.106e-18 Identity = 67/213 (31.46%), Postives = 110/213 (51.64%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIG-LDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFK 959 +I VIG+GSQG A AQNLRDS D++ +G+R+G +SF +A+ GF ++ E ++ +D++++L D Q YE+ +KPN G ++ P+++ V V PK G VRR + + G G + F HQ+ G A +A+ W+ +G TT ++E + D+FGE+ L G + +VE+ F+ Sbjct: 20 KIAVIGYGSQGHAHAQNLRDS----GHDVI--IGVRQG-KSFDKAKEDGF-----ETFEVGEAVAKADVIMVLAPDELQQSIYEE---DIKPNLKAGSALGFAHGFNIHFGYIEVPEDVDVFMVAPKAPGHLVRRTFTE-----GFGTPALFVSHQNATGHAREIAMDWAKGIGCARVGIIETTFKEETEEDLFGEQAVLCGGLTALVEAGFE 212
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_BACCN (Ketol-acid reductoisomerase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=ilvC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.106e-18 Identity = 67/213 (31.46%), Postives = 116/213 (54.46%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYE-KIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS--PFTFATTLEQEYKSDIFGERGFLLGAVHGIVESLFK 959 ++ ++G+GSQG A AQNLRD ++ V VGLRKG +S+ +A+ GF ++ + E + +D+V++L+ D Q + Y+ +I S ++ + Q + P+++ V V PKG G VRR + + G + + FAV+QD G AT AL ++ +G+ TT ++E ++D+FGE+ L G V +V++ F+ Sbjct: 19 KVAIVGYGSQGHAHAQNLRD------NNFDVVVGLRKG-KSWEKAKEDGF-----SVYSVAEAAAMADVVMVLLPDELQPEVYQAEIESNLQSGNALVFAHGFNVHFNQ---VTPPEDVDVFLVAPKGPGHLVRRTFTE-----GGAVPALFAVYQDATGTATEKALSYADGIGATRAGVLETTFKEETETDLFGEQAVLCGGVTALVKAGFE 211 The following BLAST results are available for this feature:
BLAST of DY262550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262550 ID=DY262550; Name=DY262550; organism=Citrus clementina; type=EST; length=1290bpback to top |