DY262550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_PROM5 (Ketol-acid reductoisomerase OS=Prochlorococcus marinus (strain MIT 9515) GN=ilvC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.847e-15 Identity = 66/216 (30.56%), Postives = 107/216 (49.54%), Query Frame = 3 Query: 333 IGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKN-ISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 I +IG+GSQG A A NL+D S + V VGL KGS+S ++A G + + E +D +++L+ D Q D Y K ++PN GL P + + V+ + PKG G +VR Y NG G+ + FAV QD A ++A+ ++ +G T ++E ++D+FGE+ L G + +V+S F+ ++ Sbjct: 20 IAIIGYGSQGHAHALNLKD------SGMDVIVGLYKGSKSESKAINDGL-----EVFTVSEACEKADWIMILLPDEFQKDVYIKE---IEPNLKEGKILSFAHGFNIRFGLIKPPSFVDVVMIAPKGPGHTVRWEYQ-----NGQGVPALFAVEQDYSSNARSLAMAYAKGIGGTRAGILETNFKEETETDLFGEQAVLCGGLSELVKSGFETLVE 216
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_NITWN (Ketol-acid reductoisomerase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=ilvC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.847e-15 Identity = 63/217 (29.03%), Postives = 106/217 (48.85%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNY-EKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS--PFTFATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ ++G+GSQG A A NL+DS + + + LRKGS S +A AGF + ++ E DLV++L D Q D Y E + MK + LD ++ V+ + PKG G +VR Y + G G+ AV +D G A ++ L ++ A+G TT +E ++D+FGE+ L G + ++++ F+ ++ Sbjct: 18 KVVIVGYGSQGHAHALNLKDSGVKE-----IAIALRKGSASAKKAEGAGF-----KVMEVAEAAKWGDLVMMLTPDELQGDIYREHLHDNMKKGAALIFAHGLNVHFNL---LDPRADLDVLMIAPKGPGHTVRAEYQR-----GGGVPCLIAVAKDSSGNAHDLGLSYASAIGGGRAGIIETTFREECETDLFGEQAVLCGGLVELIKNGFETLVE 216
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_METM6 (Ketol-acid reductoisomerase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=ilvC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.847e-15 Identity = 63/216 (29.17%), Postives = 103/216 (47.69%), Query Frame = 3 Query: 333 IGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYE-KIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNV--ALGWSVALGSPFTFATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 I VIG+GSQG AQ+ N++DS + V VGLRK S+ A+A G + I E +D++ +LI D QA+ Y+ +I C+K + PK ++V+ V PK G VRR Y + G G+ + D A ++ A+ + L TT ++E ++D+FGE+ L G V ++++ F+ ++ Sbjct: 19 IAVIGYGSQGRAQSLNMKDS------GLNVVVGLRKNGASWENAKADGHN-----VMTIEEAAEKADIIHILIPDELQAEVYDAQIKPCLKEGKTLSFSHGFNIHYGFIVP---PKGVNVVLVAPKSPGKMVRRTYEE-----GFGVPGLICIEIDATNNAFDIVSAMAKGIGLSRAGVIQTTFKEETETDLFGEQAVLCGGVTELIKAGFETLVE 215
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_JANSC (Ketol-acid reductoisomerase OS=Jannaschia sp. (strain CCS1) GN=ilvC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.847e-15 Identity = 65/217 (29.95%), Postives = 103/217 (47.47%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPK-NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ ++G+GSQG A A NLRDS A+ V V LR+GS S A+A G + I E + D+++ + D QA+ Y+K + N GL PK + VI + PKG G +VR G+ G G+ AVHQ+ RA + L + A+G + T +E ++D+FGE+ L G + ++ F+ ++ Sbjct: 18 KVAILGYGSQGHAHALNLRDSGAKN-----VVVALREGSASAAKAEGEGL-----KVMGIAEAAAWCDVIMFTMPDELQAETYKKY---VHDNLKDGAAIAFAHGLNVHFGLIEPKPGVDVIMMAPKGPGHTVR-----GEYTKGGGVPCLVAVHQNASDRALEIGLSYCSAIGGGRSGIIETNFREECETDLFGEQAVLCGGLVELIRMGFETLVE 216
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_FRASN (Ketol-acid reductoisomerase OS=Frankia sp. (strain EAN1pec) GN=ilvC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.847e-15 Identity = 65/217 (29.95%), Postives = 103/217 (47.47%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNY-EKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFA--TTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ VIG+GSQG A A NLRDS + V+VGL + S S A+A G E + +D++++L D Y E I + P ++ P + V V PKG G VRR++V+GK G+ AV D G+A ++AL ++ +G A TT +E ++D+FGE+ L G +V++ F+ ++ Sbjct: 19 KVAVIGFGSQGHAHALNLRDS------GVDVRVGLPETSTSRAKAEEQGLRVVTPA-----EASAEADIIMILTPDTTHRKIYAESIAPHLTPGKALAFGHGFNIRYGL---IEPPAGVDVFMVAPKGPGHLVRRVFVEGK-----GVPVLVAVEADATGKALDIALAYAKGIGGTRAGALRTTFTEETETDLFGEQAVLCGGASALVQAGFETLVE 216
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_CUPTR (Ketol-acid reductoisomerase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=ilvC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.847e-15 Identity = 63/217 (29.03%), Postives = 108/217 (49.77%), Query Frame = 3 Query: 333 IGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYE-KIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPK-NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS--PFTFATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 + +IG+GSQG A A NL+D S + V VGLRK S+ +A AG + ++ E + +D+V++L+ D AD Y+ ++ + +K + G P+ ++ VI + PK G +VR Y Q G G+ AVHQ+ G A ++AL ++ A G T +E ++D+FGE+ L G ++++ F+ ++ Sbjct: 19 VTIIGYGSQGHAHALNLKD------SGVNVTVGLRKSGASWNKAVNAGL-----QVKEVAEAVKNADVVMILLPDEQIADVYKNEVHANIKEGAALAFAHGFNV----HYGAVIPRADLDVIMIAPKAPGHTVRATYTQ-----GGGVPHLIAVHQNKSGAARDIALSYATANGGGRAGIIETNFREETETDLFGEQAVLCGGTVELIKAGFETLVE 215
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_BIFA0 (Ketol-acid reductoisomerase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=ilvC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.847e-15 Identity = 70/213 (32.86%), Postives = 108/213 (50.70%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFP-KNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFA--TTLEQEYKSDIFGERGFLLGAVHGIVESLFK 959 ++ +IG+GSQG A A NLRDS + V VGLR S+S A+ G ++ + E + +D++++L D Q +E + ++PN G P ++ V V PKG G VRR YV G+ G+ AV QD G ++AL ++ ALG+ A TT ++E ++D+FGE+ LLG V+ +VE F+ Sbjct: 20 KVAIIGYGSQGHAHALNLRDS------GVDVVVGLRPNSKSVEFAKEQGLEVKS-----VPEAAAEADVIMILAPDQYQKGIWE---NDIEPNIKPGAALAFAHGFNIHYGYIKPSEDHPVFMVAPKGPGHIVRREYVAGR-----GVPVVTAVEQDPRGDGWDLALAYAKALGALRAGAIKTTFKEETETDLFGEQNVLLGGVNKLVEMGFE 213
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_AGRRK (Ketol-acid reductoisomerase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ilvC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.847e-15 Identity = 63/217 (29.03%), Postives = 107/217 (49.31%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPK-NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ +IG+GSQG A A NL+DS A+ V + L+ GS + +A A GF + + E +DL+++ D QAD Y+ + + PN GL PK ++ V+ + PKG G +VR G+ G G+ AVHQ+ G A +AL ++ +G + T +E ++D+FGE+ L G + ++ + F+ ++ Sbjct: 18 KVAIIGYGSQGRAHALNLKDSGAQN-----VVIALKAGSPTVKKAEADGF-----KVMTVAEAAGWADLMMMATPDELQADIYK---ADIAPNIRDGAAIAFAHGLNVHFGLIEPKASVDVVMIAPKGPGHTVR-----GEYQKGGGVPCLVAVHQNASGNALELALSYACGVGGGRSGIIETNFREECETDLFGEQVVLCGGLVELIRAGFETLVE 216
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_SPHWW (Ketol-acid reductoisomerase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=ilvC PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.718e-15 Identity = 65/219 (29.68%), Postives = 110/219 (50.23%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDS-LAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNY-EKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPK-NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS--PFTFATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ ++G+GSQG A AQNL+DS +A+ V + LR GS + +A AGF + + +D+V++L D QA Y + + +KP + GL P+ +I V + PKG G +VR Y + G G+ A+ QD G A +VAL ++ A+G TT ++E ++D+FGE+ L G + ++ + F+ ++ Sbjct: 18 KVAIVGYGSQGHAHAQNLQDSGVAD------VAIALRPGSATAKKAEGAGFKVLSNA-----DAAKWADIVMILAPDEHQAAIYNDDLRDNLKPGAALAFAHGLNV----HFGLIEPRADIDVFMIAPKGPGHTVRSEYQR-----GGGVPCLIAIAQDASGNAHDVALSYASAIGGGRSGVIETTFKEECETDLFGEQAVLCGGLSHLIMAGFETLVE 216
BLAST of DY262550 vs. ExPASy Swiss-Prot
Match: ILVC_NITHX (Ketol-acid reductoisomerase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=ilvC PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.718e-15 Identity = 63/217 (29.03%), Postives = 107/217 (49.31%), Query Frame = 3 Query: 330 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNY-EKIFSCMKPNSIXXXXXXXXXXXXQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS--PFTFATTLEQEYKSDIFGERGFLLGAVHGIVESLFKRFLK 971 ++ ++G+GSQG A A NL+DS + + + LRKGS S +A AAGF + D+ E D+V++L D Q D Y E + MK + LD ++ V+ + PKG G +VR Y + G G+ AV +D G A ++ L ++ A+G TT +E ++D+FGE+ L G + ++++ ++ ++ Sbjct: 18 KVVIVGYGSQGHAHALNLKDSGVKE-----IAIALRKGSASAQKAEAAGF-----KVMDVAEAAKWGDVVMMLTPDELQGDIYRENLHDNMKKGAALIFAHGLNVHFNL---LDPRADLDVLMIAPKGPGHTVRSEYQR-----GGGVPCLIAVARDSSGNAHDLGLSYASAVGGGRAGIIETTFREECETDLFGEQVVLCGGLVELIKNGYETLVE 216 The following BLAST results are available for this feature:
BLAST of DY262550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262550 ID=DY262550; Name=DY262550; organism=Citrus clementina; type=EST; length=1290bpback to top |