DY262560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL3G_ARATH (RING-H2 finger protein ATL3G OS=Arabidopsis thaliana GN=ATL3G PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 6.754e-12 Identity = 31/82 (37.80%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 280 GLDPAILRKIPVVAFN-----------QQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPV 492 GLD ++++ +P+ ++ + + +CAVCL E E+G+ R LP C H FH+ECID W +SH CPLCR + Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: RN167_HUMAN (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.152e-11 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 298 LRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWF-QSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQESLESGYSTDSPPNFPTNVL 618 L++IP + + D D CA+CL E EDG+K R+LP C H +H C+D W Q+ TCP+C+ PV + G G+ E + Q +E + G D P + T +L Sbjct: 213 LKQIPTHDYQKGDQYD--VCAICLDEYEDGDKLRVLP-CAHAYHSRCVDPWLTQTRKTCPICKQPV-----HRGPGDEDQEEETQGQEEG-DEGEPRDHPASERTPLL 311
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL4L_ARATH (RING-H2 finger protein ATL4L OS=Arabidopsis thaliana GN=ATL4L PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.152e-11 Identity = 33/93 (35.48%), Postives = 48/93 (51.61%), Query Frame = 1 Query: 334 DFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRN---PVDVERSNNGNGEPSVEIDIQNSQESLESGYSTDSPPNF 603 D ECA+C++E +GE+ R+LP C+H FHV CID W S S+CP CR PV +R + ++ Q S +++ P F Sbjct: 106 DGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVPVKCDRCGHHASTAETQVKDQPPHHQHPSQFTSAIIPAF 198
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: RN167_MOUSE (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.505e-11 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 298 LRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWF-QSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQESLESGYSTDSPPNFPTNVL 618 L++IP + + D D CA+CL E EDG+K R+LP C H +H C+D W Q+ TCP+C+ PV + G G+ E + Q +E + G D P + T +L Sbjct: 213 LKQIPTHDYQKGDEYD--VCAICLDEYEDGDKLRVLP-CAHAYHSRCVDPWLTQTRKTCPICKQPV-----HRGPGDEEQEEETQEQEEG-DEGEPRDQPASEWTPLL 311
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: RN115_MOUSE (RING finger protein 115 OS=Mus musculus GN=Rnf115 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.505e-11 Identity = 39/102 (38.24%), Postives = 50/102 (49.02%), Query Frame = 1 Query: 286 DPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQESLESGYSTDS 591 D + +P V Q+ GLEC VC + EK R LP CNH FH CI W + H TCP+CR + NGE S Q+S+ S + +S DS Sbjct: 206 DKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLP-CNHFFHSSCIVPWLELHDTCPVCRKSL--------NGEDSTR-QTQSSEASASNRFSNDS 297
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL5J_ARATH (RING-H2 finger protein ATL5J OS=Arabidopsis thaliana GN=ATL5J PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.965e-11 Identity = 31/69 (44.93%), Postives = 40/69 (57.97%), Query Frame = 1 Query: 280 GLDPAILRKIPVVAFNQQD-FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 483 GL L KIP + + ECAVCL ++E G+ RL+P CNHGFH C D W +H+ CP+CR Sbjct: 78 GLSVLELEKIPKLTGRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCR 146
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL1E_ARATH (RING-H2 finger protein ATL1E OS=Arabidopsis thaliana GN=ATL1E PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.965e-11 Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 253 QDPAVTLRAGLDPAIL---RKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRN 486 Q V + GLD + + +K+ + + +G+ C +CLSE E R +P+C+H FHV+CID W + HS+CP+CRN Sbjct: 216 QPRGVVVTTGLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCRN 296
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL5M_ARATH (RING-H2 finger protein ATL5M OS=Arabidopsis thaliana GN=ATL5M PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.352e-11 Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 1 Query: 352 ECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERS 507 ECA+CLSE E GE ++L KC HGFHV+CI W + S+CP CR + + S Sbjct: 106 ECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSIFSQHS 157
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL4A_ARATH (RING-H2 finger protein ATL4A OS=Arabidopsis thaliana GN=ATL4A PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.378e-11 Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 280 GLDPAILRKIPVVAFNQ-QDFKDG---LECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPV 492 GLD ++ P + + + + G LEC VCL+E +D E RL+P C H FH +C+D+W STCP+CR V Sbjct: 56 GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICRAKV 130
BLAST of DY262560 vs. ExPASy Swiss-Prot
Match: ATL5E_ARATH (Putative RING-H2 finger protein ATL5E OS=Arabidopsis thaliana GN=ATL5E PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.718e-11 Identity = 28/79 (35.44%), Postives = 44/79 (55.70%), Query Frame = 1 Query: 259 PAVTLRAGLDPAILRKIPVVAFNQQ---DFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRN 486 PA ++ GLD ++ P + + C++CL + E E R +P+CNH FH +C+D W ++ +TCPLCRN Sbjct: 59 PAAEVKLGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRN 137 The following BLAST results are available for this feature:
BLAST of DY262560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262560 ID=DY262560; Name=DY262560; organism=Citrus clementina; type=EST; length=1316bpback to top |