DY262567

Overview
NameDY262567
Unique NameDY262567
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1307
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262567 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.313e-19
Identity = 74/252 (29.37%), Postives = 123/252 (48.81%), Query Frame = 3
Query:  180 PTIDLSGVDSDDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIK-APVYRRENTKGV-SYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLE-GRMMVGHY-------------YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLA 884
            P I L  V+  + R   +E I  A    GFF++VNHGI  EV++ + +  KG +++  E +   +   +  +GV + ++++D        W  T  ++  L    + EVP++        +   ++                 D L E   LE G +    Y             YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+    +W+DV P+  ++V+N+GD L++++N +Y SV HRV+A
Sbjct:    5 PIISLDKVNGVE-RAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMD--------WESTFFLK-HLPISNISEVPDL--------DEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIA 238          
BLAST of DY262567 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.380e-19
Identity = 82/287 (28.57%), Postives = 131/287 (45.64%), Query Frame = 3
Query:  120 PATLADLRPKSKTRPVSDV-VPTIDLSGVDSDD--LRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPV---------YRRENTKGVS--YISNIDLFH------SKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPESQLLF 920
            P + ++    + T   S + +P IDLS + S +   R   V+++  A++E GFFQ+VNHGI  +V E M+   K   +QP  +K            YR  N    S    S  + FH      S+ +  R+ L+    + E  ++E+  + +         V                       E +FL     +  Y+P     ++  G+  HTD   LTIL QD  GGL++++  +W+ VKP   AL +NIGD+ Q +SN  Y SV HRV++ +++E  S   F
Sbjct:   20 PNSTSESNTNTSTIQTSGIKLPVIDLSHLTSGEEVKRKRCVKQMVAAAKEWGFFQIVNHGIPKDVFEMMLLEEKKLFDQPFSVKVRERFSDLSKNSYRWGNPSATSPAQYSVSEAFHIILSEVSRISDDRNNLRT---IVETYVQEIARVAQMICEILGKQVNVSSEYFENIFEL----------ENSFLR----LNKYHPSVFGSEV-FGLVPHTDTSFLTILSQDQIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFF 288          
BLAST of DY262567 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.380e-19
Identity = 71/260 (27.31%), Postives = 130/260 (50.00%), Query Frame = 3
Query:  180 PTIDLSGVDSDDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIR-LGLTE-PELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPESQLLFSSFQARG 941
            P I+++ ++ +  R +++ +I  A    GFF++VNHGI  E+++++ +  K  + +  E +        +KG+  +            W  T  +R L ++   E+ ++ E  +K   E+   +++               +   LK+  +       G     YP CP+P+L  G+ +HTD G L +L QDDK  GL +    +WVDV P+  ++VIN+GD L++++N +Y SV HRV+A    E  +++  +SF   G
Sbjct:    6 PVINMNNLNGES-RVSVLNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYRKCMEQRFK--EMVASKGLDSVET----EINDTDWESTFFLRHLPVSNMSEIGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIAQ---EDGNRMSIASFYNPG 255          
BLAST of DY262567 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.259e-18
Identity = 79/290 (27.24%), Postives = 114/290 (39.31%), Query Frame = 3
Query:   96 IPRFFIHPPATLADLRPKSKTRPVSDV----VPTIDLSGVDSDDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICR-----------KEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPESQLLF 920
            IP  FI P           + +P  D+    VP IDLS  DS    P +   IA A  + GFF VVNHG+   ++    R ++ F + P   K    R+   +   Y S+     S    W++TL  +          V +              K   ++   +                   D  +        +M  ++YP C  PDLT+G   H DP  LTIL QD   GLQ+    +W  ++P P A V+NIGD    +SN  + S  HR + N     +S   F
Sbjct:   42 IPNQFIWP----------DEEKPSIDIPELNVPFIDLSSQDSTLEAPRV---IAEACTKHGFFLVVNHGVSESLIADAHRLMESFFDMPLAGKQKAQRKPG-ESCGYASSFTGRFSTKLPWKETLSFQFSNDNSGSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFF 317          
BLAST of DY262567 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.644e-18
Identity = 67/246 (27.24%), Postives = 127/246 (51.63%), Query Frame = 3
Query:  180 PTIDLSGVDSDDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIK-APVYRRENTKGV-SYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEI---CRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHY---YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANS 890
            P I++  ++ ++ R   +  I  A    GFF++VNHGI  E+++ + R  K  +++  E +   +   +  +G+ + ++++D        W  T  +R  L +  + EVP++    R+   ++   +++               +   LK+  +       G     YP CP+ DL  G+ +HTD G + +L QDDK  GLQ+   ++W+DV P+  ++VIN+GD L++++N +Y SV HRV+A +
Sbjct:    5 PVINMEKMNGEE-RAATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEGIQAEVTDMD--------WESTYFLR-HLPQSNISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQT 240          
BLAST of DY262567 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.147e-18
Identity = 72/260 (27.69%), Postives = 116/260 (44.62%), Query Frame = 3
Query:  153 KTRPVSDVVPTIDLSGVDSDDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENT---------KGVSYISNIDLFHSKAASWRDTLQIRLGLTEPEL----EEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQ--IKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLAN 887
            K  PV + VP IDL           +V++I +A ++ G FQV+NHG   E++   +   K F   P E K     +            K   Y+    L + +   W+DTL       + +L     E P   R+   +++  V++               K     +    + +MM+ +YYP CP P  T+G   H D G L  LLQ D  GLQ  I     W+ V+P+P A V+N+G  L++++N+++    HRV+ +
Sbjct:   27 KDVPVGNDVPIIDLQ-----QHHHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGYF-DNELSQIQMMLTNYYPPCPDPSSTLGSGGHYD-GNLITLLQQDLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTD 279          
BLAST of DY262567 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.663e-18
Identity = 70/246 (28.46%), Postives = 123/246 (50.00%), Query Frame = 3
Query:  180 PTIDLSGVDSDDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPE--IKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEI---CRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHY---YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANS 890
            P I+L  ++  + R   +E I  A    GFF++VNHGI  EV++ + +  KG +++  E   K  V  +      + ++++D        W  T  +R  L    + EVP++    R+   ++   +++               +   LK+  +       G     YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+    +W+DV P+  ++V+N+GD L++++N +Y SV HRV+  +
Sbjct:    5 PIINLEKLNGSE-RADTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLD--------WESTFFLR-HLPVSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQT 240          
BLAST of DY262567 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.066e-17
Identity = 74/270 (27.41%), Postives = 120/270 (44.44%), Query Frame = 3
Query:  138 LRPKSKTRPVSDVV--PTIDLSGVDSDDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEE---VPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVG-HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPESQLLFSSF 929
            L P  +  P +  V  P ID+S    D++R  I++    + +E GF QVVNHGI   +L  M      F + P E KA  +  + ++                 W D L++   L   + ++    P++ R+    +    +                + D         GR++V  +YYP  P P  T+G+  H D   +T+LL     GL+I +   W+ V+PVP +LVIN G  L++++N    +VEHR   N +   E +L  +SF
Sbjct:   20 LLPADRLHPATTDVSLPIIDMSR-GRDEVRQAILD----SGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAFETLGEKYWIDVLELLYPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGD-ISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPGAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNFA---EPRLSVASF 280          
BLAST of DY262567 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.818e-17
Identity = 69/253 (27.27%), Postives = 119/253 (47.04%), Query Frame = 3
Query:  249 ASRELGFFQVVNHGIGVEVLERMVRAIKG-FHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEI---CRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHY------YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPESQLLFSSFQARGTPLWTIPGTDI 974
            A    GFF+++NHGI  E  E+     K  + E     +   ++    K +    N+D        W  T  +R  L    + +VP++   C     E+   +++               +   LK + F  G   +  +      YP CP+P+L  G+ +HTD G + +L QDD   GLQ+   EEW+DV P+  ++V+NIGD L++++N +Y SV HRV+A ++    +++  +SF   G+     P  ++
Sbjct:   19 ACENWGFFELLNHGISHEPNEQSETVNKEHYREHYRRFREQRFKEFAAKTLDSGENVD---GDNLDWESTFFLR-HLPTSNISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLK-RVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNGKYKSVMHRVVAQTN---GNRMSIASFYNPGSDAVIFPAPEL 263          
BLAST of DY262567 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.050e-17
Identity = 46/136 (33.82%), Postives = 70/136 (51.47%), Query Frame = 3
Query:  651 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPESQLLFSSFQARGTPLWTIPGTDIPRETRLVFGRSHTQTMLTRFFQKNLKEK 1058
            +YYP CPQP+L VG+ +HTD   L+ +L +   GLQ+ HG  WV  +  PG +++++GD L+I+SN  Y SV HR L N      S ++F         L  +P             R+  Q +  + F+K  + K
Sbjct:  237 NYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHLDRKLFKKKQQHK 372          
The following BLAST results are available for this feature:
BLAST of DY262567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
ACCO1_PETHY3.313e-1929.371-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
G2OX7_ARATH7.380e-1928.57Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
ACCO3_CUCME7.380e-1927.311-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
GAOX2_ARATH1.259e-1827.24Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
ACCO_DIOKA1.644e-1827.241-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
HY6H_HYONI2.147e-1827.69Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
ACCO_TOBAC3.663e-1828.461-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
IDS2_HORVU1.066e-1727.41Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
ACCO_DENCR1.818e-1727.271-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
LDOX_MAIZE4.050e-1733.82Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BD03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262567 ID=DY262567; Name=DY262567; organism=Citrus clementina; type=EST; length=1307bp
TGAGCCTAGAATCATACGACAGGGCCAAAGAAGTGAAACGATTCGACGAG
TCCAAAGTCGGGGTCAAAGGTTTAGTTGACTTGGGCGTCACCGCCATCCC
CCGCTTTTTCATCCACCCACCCGCCACTCTTGCCGATCTCAGACCCAAGT
CAAAGACCCGGCCCGTCTCTGATGTAGTCCCCACCATCGATTTATCGGGC
GTTGACTCGGACGATCTGCGGCCGACGATTGTGGAAAAGATAGCACGTGC
CTCGCGGGAGCTGGGGTTCTTTCAGGTTGTGAATCACGGCATCGGAGTTG
AGGTCTTGGAGCGTATGGTTCGGGCCATTAAAGGGTTTCATGAACAGCCG
CCAGAGATCAAGGCGCCGGTGTATCGGAGGGAGAACACCAAAGGCGTGTC
TTACATTTCCAACATCGATTTGTTTCACTCTAAAGCTGCCAGCTGGAGGG
ACACACTGCAGATAAGGCTAGGTCTGACGGAACCAGAGCTTGAAGAAGTT
CCTGAAATATGTAGGAAAGAGGCAGTCGAGTGGAACCACCATGTAAAACA
GCTCGGAGAGCTTTTGTTTGGGCTGCTGTGTGAAGGTTTGGGGTTGAAAA
CCGATAGGTTGAAGGAAAAGACCTTCCTGGAAGGGAGGATGATGGTGGGC
CATTATTATCCCTACTGTCCGCAGCCTGATCTGACAGTGGGGATCACATC
TCATACTGATCCAGGGCCATTGACAATCTTGTTGCAAGATGATAAAGGTG
GGCTGCAAATTAAGCATGGTGAGGAATGGGTGGATGTTAAACCAGTTCCA
GGAGCTCTGGTTATTAACATTGGGGATATACTTCAGATTATGTCCAATGA
TGAATACATAAGTGTAGAGCATAGAGTATTGGCTAATTCGTCCCTGGAAC
CCGAATCTCAATTGCTGTTTTCCTCATTCCAAGCGAGAGGGACACCTTTA
TGGACCATTCCCGGAACTGATATCCCCAGAGAAACCCGGCTCGTTTTCGG
CCGCTCACATACCCAAACCATGTTAACCAGGTTCTTCCAAAAAAATTTAA
AGGAAAAAACATTGTGAAATTATAATGGCTGGAAAAAAAAAAATTGGAAA
ATTCTGGGTTTTTTGGGCCGGTAAAACTAATTCTTACTAAAAAAAACAAA
TTTAAATGGTTCCCCCCATTTAAAAACAACAAAATGGTAATTTGGGTTCC
CCTTTCCCAAAATAATAAAAAAAGGGGGGGGGCTTCTCCCGTGTTCCTCT
TTTTAAAATAGGGGAAAAAAGGAAAAAAGGGTGTTTTCCTTGCCTTTTTT
ATTTTTA
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