DY262577

Overview
NameDY262577
Unique NameDY262577
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1203
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_SALEP (D-cysteine desulfhydrase OS=Salmonella enteritidis PT4 (strain P125109) GN=dcyD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.335e-25
Identity = 73/189 (38.62%), Postives = 100/189 (52.91%), Query Frame = 2 
Query:  269 HLTPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQXLQTGTG 829
            HLT  P     L   PTP+    LP L      E+++KRDD++ + + GNK+RKLEFL+ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+            TL      ++  +G RPYVIPVGGS+++G  GY+E+  EI Q  +   G
Sbjct:    5 HLTRFPR--LELIGAPTPLEY--LPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLAT----RIEAQGFRPYVIPVGGSSALGAMGYVESALEIAQQCEEVVG 185

HSP 2 Score: 24.2534 bits (51), Expect = 3.335e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_SALDC (D-cysteine desulfhydrase OS=Salmonella dublin (strain CT_02021853) GN=dcyD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.335e-25
Identity = 73/189 (38.62%), Postives = 100/189 (52.91%), Query Frame = 2 
Query:  269 HLTPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQXLQTGTG 829
            HLT  P     L   PTP+    LP L      E+++KRDD++ + + GNK+RKLEFL+ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+            TL      ++  +G RPYVIPVGGS+++G  GY+E+  EI Q  +   G
Sbjct:    5 HLTRFPR--LELIGAPTPLEY--LPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLAT----RIEAQGFRPYVIPVGGSSALGAMGYVESALEIAQQCEEVVG 185

HSP 2 Score: 24.2534 bits (51), Expect = 3.335e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_SALA4 (D-cysteine desulfhydrase OS=Salmonella agona (strain SL483) GN=dcyD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.335e-25
Identity = 73/189 (38.62%), Postives = 100/189 (52.91%), Query Frame = 2 
Query:  269 HLTPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQXLQTGTG 829
            HLT  P     L   PTP+    LP L      E+++KRDD++ + + GNK+RKLEFL+ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+            TL      ++  +G RPYVIPVGGS+++G  GY+E+  EI Q  +   G
Sbjct:    5 HLTRFPR--LELIGAPTPLEY--LPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLAT----RIEAQGFRPYVIPVGGSSALGAMGYVESALEIAQQCEEVVG 185

HSP 2 Score: 24.2534 bits (51), Expect = 3.335e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_SALTI (D-cysteine desulfhydrase OS=Salmonella typhi GN=dcyD PE=3 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 4.340e-25
Identity = 73/189 (38.62%), Postives = 100/189 (52.91%), Query Frame = 2 
Query:  269 HLTPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQXLQTGTG 829
            HLT  P     L   PTP+    LP L      E+++KRDD++ + + GNK+RKLEFL+ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+            TL      ++  +G RPYVIPVGGS+++G  GY+E+  EI Q  +   G
Sbjct:    5 HLTRFPR--LELIGAPTPLEY--LPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLAT----RIEAQGFRPYVIPVGGSSALGAMGYVESALEIVQQCEEVVG 185

HSP 2 Score: 24.2534 bits (51), Expect = 4.340e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_SALPK (D-cysteine desulfhydrase OS=Salmonella paratyphi A (strain AKU_12601) GN=dcyD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.340e-25
Identity = 73/189 (38.62%), Postives = 100/189 (52.91%), Query Frame = 2 
Query:  269 HLTPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQXLQTGTG 829
            HLT  P     L   PTP+    LP L      E+++KRDD++ + + GNK+RKLEFL+ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+            TL      ++  +G RPYVIPVGGS+++G  GY+E+  EI Q  +   G
Sbjct:    5 HLTRFPR--LELIGAPTPLEY--LPRLSDYPGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDVLTDPDAQLQTLAT----RIEAQGFRPYVIPVGGSSALGAMGYVESALEIAQQCEEVVG 185

HSP 2 Score: 24.2534 bits (51), Expect = 4.340e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_SALPA (D-cysteine desulfhydrase OS=Salmonella paratyphi A GN=dcyD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.340e-25
Identity = 73/189 (38.62%), Postives = 100/189 (52.91%), Query Frame = 2 
Query:  269 HLTPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQXLQTGTG 829
            HLT  P     L   PTP+    LP L      E+++KRDD++ + + GNK+RKLEFL+ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+            TL      ++  +G RPYVIPVGGS+++G  GY+E+  EI Q  +   G
Sbjct:    5 HLTRFPR--LELIGAPTPLEY--LPRLSDYPGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDVLTDPDAQLQTLAT----RIEAQGFRPYVIPVGGSSALGAMGYVESALEIAQQCEEVVG 185

HSP 2 Score: 24.2534 bits (51), Expect = 4.340e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_SERP5 (D-cysteine desulfhydrase OS=Serratia proteamaculans (strain 568) GN=dcyD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.648e-25
Identity = 64/169 (37.87%), Postives = 95/169 (56.21%), Query Frame = 2 
Query:  317 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS--KEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQXLQ 817
            TP+ K +  +     E+++KRDD++ M + GNK+RKLEFL ADA+ QGAD ++T G IQSNH R  A  A  L L C  +L       +++    GN L+  L  A +E+     +   ++        L  +L  +G RPYV+PVGGSN++G  GY++   EI +  Q
Sbjct:   20 TPLEKLSRLSDYLGREIYIKRDDVTPMAMGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLENPIDTQEENYLTNGNRLLLGLFNAQVEMCEALHDPQQQLAD------LATRLEAQGFRPYVVPVGGSNALGALGYVQCALEIAEQSQ 182

HSP 2 Score: 24.2534 bits (51), Expect = 5.648e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  192 VVASGSAGTHAGLAVG 207
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_SALCH (D-cysteine desulfhydrase OS=Salmonella choleraesuis GN=dcyD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.649e-25
Identity = 72/182 (39.56%), Postives = 98/182 (53.85%), Query Frame = 2 
Query:  269 HLTPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            HLT  P     L   PTP+    LP L      E+++KRDD++ + + GNK+RKLEFL+ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+            TL      ++  +G RPYVIPVGGS+++G  GY+E+  EI Q
Sbjct:    5 HLTRFPR--LELIGAPTPLEY--LPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLAT----RIEAQGFRPYVIPVGGSSALGAMGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 5.649e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_SHIB3 (D-cysteine desulfhydrase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=dcyD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 7.352e-25
Identity = 70/171 (40.94%), Postives = 94/171 (54.97%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLL----KEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+          ++T  N   E+L      +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLNLFNTQIEMCD--------ALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 7.352e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_ECOL6 (D-cysteine desulfhydrase OS=Escherichia coli O6 GN=dcyD PE=3 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 7.352e-25
Identity = 67/167 (40.12%), Postives = 92/167 (55.09%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+      +         +L  ++  +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD----ALTDPNAQLEVLATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 7.352e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
The following BLAST results are available for this feature:
BLAST of DY262577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
DCYD_SALEP3.335e-2538.62D-cysteine desulfhydrase OS=Salmonella enteritidis... [more]
DCYD_SALDC3.335e-2538.62D-cysteine desulfhydrase OS=Salmonella dublin (str... [more]
DCYD_SALA43.335e-2538.62D-cysteine desulfhydrase OS=Salmonella agona (stra... [more]
DCYD_SALTI4.340e-2538.62D-cysteine desulfhydrase OS=Salmonella typhi GN=dc... [more]
DCYD_SALPK4.340e-2538.62D-cysteine desulfhydrase OS=Salmonella paratyphi A... [more]
DCYD_SALPA4.340e-2538.62D-cysteine desulfhydrase OS=Salmonella paratyphi A... [more]
DCYD_SERP55.648e-2537.87D-cysteine desulfhydrase OS=Serratia proteamaculan... [more]
DCYD_SALCH5.649e-2539.56D-cysteine desulfhydrase OS=Salmonella choleraesui... [more]
DCYD_SHIB37.352e-2540.94D-cysteine desulfhydrase OS=Shigella boydii seroty... [more]
DCYD_ECOL67.352e-2540.12D-cysteine desulfhydrase OS=Escherichia coli O6 GN... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BE01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262577 ID=DY262577; Name=DY262577; organism=Citrus clementina; type=EST; length=1203bp
TTTTGGATTTTGGTAGTGTCATGCAGCAGCAGCAGCGGTTAAAGCAAATG
GAATCATGTTGTTGTGCAGCAGCTGCAGCGGTAACCTTCTGAGTTCAATT
GTTTCTCCAAAATTAAGACAACGCCTAATCAGAGTCTCTGAGTCTCAGCT
TCATCATCATCAGCAGCATAAAATCAAAATGGAAAGAAAAGAGAGCGGTA
ATGATAGTGATGCTTTCGGTTTCAAATTCCTCACCAAAACCCCATACGCT
TCTCCTTCTTGGGCTTCTCATCTCACCCCCATCCCTTCTCACGTCTTCTC
TCTCGGCCACTTTCCAACTCCAATTCACAAATGGAACCTCCCTAATTTGC
CCCATAACACTGAGGTCTGGCTCAAGCGTGATGACCTTTCCGGCATGCAA
TTGAGTGGAAACAAGGTAAGGAAATTAGAGTTTTTGATGGCAGATGCAGT
GGCTCAAGGTGCTGATTGCATCATCACCATTGGAGGCATCCAAAGCAATC
ATTGTCGTGCTGCTGCCGTTGCTGCCAAGTATCTCAATCTTGATTGTTAT
CTTATTCTTCGCACCTCTAAGGTTCTGGTGGACCAAGATCCTGGTTTGAC
TGGCAATCTACTAGTTGAACGTTTAGTTGGAGCTCATATTGAACTTATCT
CTAAAGAAGAGTATTCAAAAATTGGGAGTGTGACTCTTACTAACATTTTA
AAAGAAAAGTTGCTAAAGGAAGGGAGAAGACCATATGTTATTCCTGTTGG
TGGGTCAAACTCAATAGGGACATGGGGTTATATTGAAGCAATTAAGGAGA
TTGAGCAGNCACTTCAGACTGGGACTGGTGGAGTGAAATTGATGATATTG
TTGTAGCTTGTGGCAGTGGAGGAACAATTGCTGGTTTGTCATTGGGGTCA
TGGCTTGGAACATTGAAAGCAAAAGTTCATGCTTTTTCTGTTTGTGATGA
CCCTGATTACTTCTACGACTATACCCAAGGGCTACTTGATGGGCTCAATG
CAGGAATTGACTCCCATGATTTGGTAAACATTCAAAATCCAAAGGTTCTG
GCTATAGCATCACATTTCGGAAGAACTAATTTTGTTAAAAAATTGGTGCC
GCAACGGGGGTAATTTTTGATCAGTTTAAAAGGGAAAAAATTGCCCTAGG
GGGAGTGGAAAAAAAAGGGCTTAAAAATCCCAAAAAAGGGGGGAAAGGGG
AGG
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