DY262577

Overview
NameDY262577
Unique NameDY262577
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1203
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_ECOUT (D-cysteine desulfhydrase OS=Escherichia coli (strain UTI89 / UPEC) GN=dcyD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 9.568e-25
Identity = 68/167 (40.72%), Postives = 92/167 (55.09%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+      +     T    L  ++  +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD----ALTDPNTQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 9.568e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_ECO45 (D-cysteine desulfhydrase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=dcyD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 9.568e-25
Identity = 68/167 (40.72%), Postives = 92/167 (55.09%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+      +     T    L  ++  +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD----ALTDPNTQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 9.568e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_ECO27 (D-cysteine desulfhydrase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=dcyD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 9.568e-25
Identity = 68/167 (40.72%), Postives = 92/167 (55.09%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+      +     T    L  ++  +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD----ALTDPNTQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 9.568e-25
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_ECOSM (D-cysteine desulfhydrase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=dcyD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.245e-24
Identity = 70/171 (40.94%), Postives = 94/171 (54.97%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLL----KEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+          ++T  N   E+L      +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD--------ALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 1.245e-24
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_ECOLU (D-cysteine desulfhydrase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=dcyD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.245e-24
Identity = 70/171 (40.94%), Postives = 94/171 (54.97%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLL----KEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+          ++T  N   E+L      +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD--------ALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 1.245e-24
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_ECOLI (D-cysteine desulfhydrase OS=Escherichia coli (strain K12) GN=dcyD PE=1 SV=4)

HSP 1 Score: 111.309 bits (277), Expect = 1.245e-24
Identity = 70/171 (40.94%), Postives = 94/171 (54.97%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLL----KEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+          ++T  N   E+L      +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD--------ALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 1.245e-24
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_ECOLC (D-cysteine desulfhydrase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=dcyD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.245e-24
Identity = 70/171 (40.94%), Postives = 94/171 (54.97%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLL----KEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+          ++T  N   E+L      +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD--------ALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 1.245e-24
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_ECOHS (D-cysteine desulfhydrase OS=Escherichia coli O9:H4 (strain HS) GN=dcyD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.245e-24
Identity = 70/171 (40.94%), Postives = 94/171 (54.97%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLL----KEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+          ++T  N   E+L      +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD--------ALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 1.245e-24
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_ECODH (D-cysteine desulfhydrase OS=Escherichia coli (strain K12 / DH10B) GN=dcyD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.245e-24
Identity = 70/171 (40.94%), Postives = 94/171 (54.97%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLL----KEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+          ++T  N   E+L      +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD--------ALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 1.245e-24
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_ECOBW (D-cysteine desulfhydrase OS=Escherichia coli (strain K12 / BW2952) GN=dcyD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.245e-24
Identity = 70/171 (40.94%), Postives = 94/171 (54.97%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLL----KEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+          ++T  N   E+L      +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD--------ALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 1.245e-24
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
The following BLAST results are available for this feature:
BLAST of DY262577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
DCYD_ECOUT9.568e-2540.72D-cysteine desulfhydrase OS=Escherichia coli (stra... [more]
DCYD_ECO459.568e-2540.72D-cysteine desulfhydrase OS=Escherichia coli O45:K... [more]
DCYD_ECO279.568e-2540.72D-cysteine desulfhydrase OS=Escherichia coli O127:... [more]
DCYD_ECOSM1.245e-2440.94D-cysteine desulfhydrase OS=Escherichia coli (stra... [more]
DCYD_ECOLU1.245e-2440.94D-cysteine desulfhydrase OS=Escherichia coli O17:K... [more]
DCYD_ECOLI1.245e-2440.94D-cysteine desulfhydrase OS=Escherichia coli (stra... [more]
DCYD_ECOLC1.245e-2440.94D-cysteine desulfhydrase OS=Escherichia coli (stra... [more]
DCYD_ECOHS1.245e-2440.94D-cysteine desulfhydrase OS=Escherichia coli O9:H4... [more]
DCYD_ECODH1.245e-2440.94D-cysteine desulfhydrase OS=Escherichia coli (stra... [more]
DCYD_ECOBW1.245e-2440.94D-cysteine desulfhydrase OS=Escherichia coli (stra... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BE01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262577 ID=DY262577; Name=DY262577; organism=Citrus clementina; type=EST; length=1203bp
TTTTGGATTTTGGTAGTGTCATGCAGCAGCAGCAGCGGTTAAAGCAAATG
GAATCATGTTGTTGTGCAGCAGCTGCAGCGGTAACCTTCTGAGTTCAATT
GTTTCTCCAAAATTAAGACAACGCCTAATCAGAGTCTCTGAGTCTCAGCT
TCATCATCATCAGCAGCATAAAATCAAAATGGAAAGAAAAGAGAGCGGTA
ATGATAGTGATGCTTTCGGTTTCAAATTCCTCACCAAAACCCCATACGCT
TCTCCTTCTTGGGCTTCTCATCTCACCCCCATCCCTTCTCACGTCTTCTC
TCTCGGCCACTTTCCAACTCCAATTCACAAATGGAACCTCCCTAATTTGC
CCCATAACACTGAGGTCTGGCTCAAGCGTGATGACCTTTCCGGCATGCAA
TTGAGTGGAAACAAGGTAAGGAAATTAGAGTTTTTGATGGCAGATGCAGT
GGCTCAAGGTGCTGATTGCATCATCACCATTGGAGGCATCCAAAGCAATC
ATTGTCGTGCTGCTGCCGTTGCTGCCAAGTATCTCAATCTTGATTGTTAT
CTTATTCTTCGCACCTCTAAGGTTCTGGTGGACCAAGATCCTGGTTTGAC
TGGCAATCTACTAGTTGAACGTTTAGTTGGAGCTCATATTGAACTTATCT
CTAAAGAAGAGTATTCAAAAATTGGGAGTGTGACTCTTACTAACATTTTA
AAAGAAAAGTTGCTAAAGGAAGGGAGAAGACCATATGTTATTCCTGTTGG
TGGGTCAAACTCAATAGGGACATGGGGTTATATTGAAGCAATTAAGGAGA
TTGAGCAGNCACTTCAGACTGGGACTGGTGGAGTGAAATTGATGATATTG
TTGTAGCTTGTGGCAGTGGAGGAACAATTGCTGGTTTGTCATTGGGGTCA
TGGCTTGGAACATTGAAAGCAAAAGTTCATGCTTTTTCTGTTTGTGATGA
CCCTGATTACTTCTACGACTATACCCAAGGGCTACTTGATGGGCTCAATG
CAGGAATTGACTCCCATGATTTGGTAAACATTCAAAATCCAAAGGTTCTG
GCTATAGCATCACATTTCGGAAGAACTAATTTTGTTAAAAAATTGGTGCC
GCAACGGGGGTAATTTTTGATCAGTTTAAAAGGGAAAAAATTGCCCTAGG
GGGAGTGGAAAAAAAAGGGCTTAAAAATCCCAAAAAAGGGGGGAAAGGGG
AGG
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