DY262577

Overview
NameDY262577
Unique NameDY262577
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1203
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_SHIFL (D-cysteine desulfhydrase OS=Shigella flexneri GN=dcyD PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 3.572e-24
Identity = 69/171 (40.35%), Postives = 94/171 (54.97%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLL----KEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRD+++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+          ++T  N   E+L      +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDEVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD--------ALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 3.572e-24
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_SHIF8 (D-cysteine desulfhydrase OS=Shigella flexneri serotype 5b (strain 8401) GN=dcyD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.572e-24
Identity = 69/171 (40.35%), Postives = 94/171 (54.97%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLL----KEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRD+++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R  A  A  L L C  +L        ++    GN L+  L    IE+          ++T  N   E+L      +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDEVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCD--------ALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 3.572e-24
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_ESCF3 (D-cysteine desulfhydrase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=dcyD PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 7.871e-24
Identity = 65/167 (38.92%), Postives = 92/167 (55.09%), Query Frame = 2 
Query:  314 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEIEQ 808
            PTP+    LP        E+++KRDD++ + + GNKVRKLEFL ADA+ +GAD ++T G IQSNH R  A  A  L L C  +L        ++    GN L+  L    +E+ +  +            L  ++  +G RPYVIPVGGSN++G  GY+E+  EI Q
Sbjct:   18 PTPLEY--LPRFSDYLGREIFIKRDDVTPLAMGGNKVRKLEFLAADALREGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTQAENYLSNGNRLLLDLFNVQVEMCAALD----DPDAQLQELATRIEAQGFRPYVIPVGGSNALGALGYVESALEIAQ 178

HSP 2 Score: 24.2534 bits (51), Expect = 7.871e-24
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  190 VVASGSAGTHAGLAVG 205
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_RALEH (1-aminocyclopropane-1-carboxylate deaminase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acdS PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 9.857e-23
Identity = 69/184 (37.50%), Postives = 99/184 (53.80%), Query Frame = 2 
Query:  269 HLTPIPSHVFSLGHFPTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQ 808
            +L   P H  + G  PTPIH  +    +L    E++ KRDD  SG+   GNK RKLE+++ D +AQGAD +++IGGIQSNH R  A  A +L L C L+        D      GN+ + R++GA + L+S  E   IG         E + K G +PY IP G S + +G  GY+   +E+ +
Sbjct:    2 NLKQFPRHSLTFG--PTPIHPLSRLSESLGGKVELYAKRDDCNSGLAFGGNKTRKLEYVIPDVLAQGADTLVSIGGIQSNHTRQVAAIAAHLGLKCVLVQENWVNYSDAVYDRVGNIQMSRIMGADVRLVS--EGFDIGIRPSWEEAMESVRKAGGKPYPIPAGCSEHPLGGLGYVGFAEEVRE 181
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_YERE8 (D-cysteine desulfhydrase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=dcyD PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.425e-22
Identity = 63/165 (38.18%), Postives = 93/165 (56.36%), Query Frame = 2 
Query:  317 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLT-GNLLVERLVGAHIELIS--KEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEI 802
            TP+ K +  +     E+++KRDD++ + L GNK+RKLEFL ADA+ QGAD ++T G IQSNH R  A  A  L L C  +L  + +   Q+  LT GN L+  L    + +     +   ++        L  ++  +G RPYV+PVGGSN+ G  GY++   EI
Sbjct:   20 TPLEKLSRLSDYLGREIYIKRDDVTPLALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLE-NPIGTSQENYLTNGNRLLLDLFNVEVVMCDGLHDPNQQLAE------LATRIEAQGFRPYVVPVGGSNAFGALGYVQCALEI 177

HSP 2 Score: 24.2534 bits (51), Expect = 1.425e-22
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  191 VVASGSAGTHAGLAVG 206
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_YERPS (D-cysteine desulfhydrase OS=Yersinia pseudotuberculosis GN=dcyD PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.412e-22
Identity = 63/163 (38.65%), Postives = 96/163 (58.90%), Query Frame = 2 
Query:  317 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLT-GNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEI 802
            TP+ K +  +     E+++KRDD++ + L GNK+RKLEFL ADA+ QGAD ++T G IQSNH R  A  A  L L C  +L  + +  +Q   LT GN L+  L   +++++  E  +          L  ++  +G RPYV+P+GGSN++G  GY++   EI
Sbjct:   20 TPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLE-NPIGTEQANYLTNGNRLLLDLF--NVDVVMCEALNDPNQQLAE--LATRVEAQGFRPYVVPIGGSNALGALGYVQCSLEI 177

HSP 2 Score: 24.2534 bits (51), Expect = 2.412e-22
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  191 VVASGSAGTHAGLAVG 206
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_YERPP (D-cysteine desulfhydrase OS=Yersinia pestis (strain Pestoides F) GN=dcyD PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.412e-22
Identity = 63/163 (38.65%), Postives = 96/163 (58.90%), Query Frame = 2 
Query:  317 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLT-GNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEI 802
            TP+ K +  +     E+++KRDD++ + L GNK+RKLEFL ADA+ QGAD ++T G IQSNH R  A  A  L L C  +L  + +  +Q   LT GN L+  L   +++++  E  +          L  ++  +G RPYV+P+GGSN++G  GY++   EI
Sbjct:   20 TPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLE-NPIGTEQANYLTNGNRLLLDLF--NVDVVMCEALNDPNQQLAE--LATRVEAQGFRPYVVPIGGSNALGALGYVQCSLEI 177

HSP 2 Score: 24.2534 bits (51), Expect = 2.412e-22
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  191 VVASGSAGTHAGLAVG 206
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_YERPN (D-cysteine desulfhydrase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=dcyD PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.412e-22
Identity = 63/163 (38.65%), Postives = 96/163 (58.90%), Query Frame = 2 
Query:  317 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLT-GNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEI 802
            TP+ K +  +     E+++KRDD++ + L GNK+RKLEFL ADA+ QGAD ++T G IQSNH R  A  A  L L C  +L  + +  +Q   LT GN L+  L   +++++  E  +          L  ++  +G RPYV+P+GGSN++G  GY++   EI
Sbjct:   20 TPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLE-NPIGTEQANYLTNGNRLLLDLF--NVDVVMCEALNDPNQQLAE--LATRVEAQGFRPYVVPIGGSNALGALGYVQCSLEI 177

HSP 2 Score: 24.2534 bits (51), Expect = 2.412e-22
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  191 VVASGSAGTHAGLAVG 206
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_YERPE (D-cysteine desulfhydrase OS=Yersinia pestis GN=dcyD PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.412e-22
Identity = 63/163 (38.65%), Postives = 96/163 (58.90%), Query Frame = 2 
Query:  317 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLT-GNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEI 802
            TP+ K +  +     E+++KRDD++ + L GNK+RKLEFL ADA+ QGAD ++T G IQSNH R  A  A  L L C  +L  + +  +Q   LT GN L+  L   +++++  E  +          L  ++  +G RPYV+P+GGSN++G  GY++   EI
Sbjct:   20 TPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLE-NPIGTEQANYLTNGNRLLLDLF--NVDVVMCEALNDPNQQLAE--LATRVEAQGFRPYVVPIGGSNALGALGYVQCSLEI 177

HSP 2 Score: 24.2534 bits (51), Expect = 2.412e-22
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  191 VVASGSAGTHAGLAVG 206
[Close]
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: DCYD_YERP3 (D-cysteine desulfhydrase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=dcyD PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.412e-22
Identity = 63/163 (38.65%), Postives = 96/163 (58.90%), Query Frame = 2 
Query:  317 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLT-GNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSNSIGTWGYIEAIKEI 802
            TP+ K +  +     E+++KRDD++ + L GNK+RKLEFL ADA+ QGAD ++T G IQSNH R  A  A  L L C  +L  + +  +Q   LT GN L+  L   +++++  E  +          L  ++  +G RPYV+P+GGSN++G  GY++   EI
Sbjct:   20 TPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLE-NPIGTEQANYLTNGNRLLLDLF--NVDVVMCEALNDPNQQLAE--LATRVEAQGFRPYVVPIGGSNALGALGYVQCSLEI 177

HSP 2 Score: 24.2534 bits (51), Expect = 2.412e-22
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  850 VVACGSGGTIAGLSLG 897
            VVA GS GT AGL++G
Sbjct:  191 VVASGSAGTHAGLAVG 206
The following BLAST results are available for this feature:
BLAST of DY262577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
DCYD_SHIFL3.572e-2440.35D-cysteine desulfhydrase OS=Shigella flexneri GN=d... [more]
DCYD_SHIF83.572e-2440.35D-cysteine desulfhydrase OS=Shigella flexneri sero... [more]
DCYD_ESCF37.871e-2438.92D-cysteine desulfhydrase OS=Escherichia fergusonii... [more]
1A1D_RALEH9.857e-2337.501-aminocyclopropane-1-carboxylate deaminase OS=Ral... [more]
DCYD_YERE81.425e-2238.18D-cysteine desulfhydrase OS=Yersinia enterocolitic... [more]
DCYD_YERPS2.412e-2238.65D-cysteine desulfhydrase OS=Yersinia pseudotubercu... [more]
DCYD_YERPP2.412e-2238.65D-cysteine desulfhydrase OS=Yersinia pestis (strai... [more]
DCYD_YERPN2.412e-2238.65D-cysteine desulfhydrase OS=Yersinia pestis bv. An... [more]
DCYD_YERPE2.412e-2238.65D-cysteine desulfhydrase OS=Yersinia pestis GN=dcy... [more]
DCYD_YERP32.412e-2238.65D-cysteine desulfhydrase OS=Yersinia pseudotubercu... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BE01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262577 ID=DY262577; Name=DY262577; organism=Citrus clementina; type=EST; length=1203bp
TTTTGGATTTTGGTAGTGTCATGCAGCAGCAGCAGCGGTTAAAGCAAATG
GAATCATGTTGTTGTGCAGCAGCTGCAGCGGTAACCTTCTGAGTTCAATT
GTTTCTCCAAAATTAAGACAACGCCTAATCAGAGTCTCTGAGTCTCAGCT
TCATCATCATCAGCAGCATAAAATCAAAATGGAAAGAAAAGAGAGCGGTA
ATGATAGTGATGCTTTCGGTTTCAAATTCCTCACCAAAACCCCATACGCT
TCTCCTTCTTGGGCTTCTCATCTCACCCCCATCCCTTCTCACGTCTTCTC
TCTCGGCCACTTTCCAACTCCAATTCACAAATGGAACCTCCCTAATTTGC
CCCATAACACTGAGGTCTGGCTCAAGCGTGATGACCTTTCCGGCATGCAA
TTGAGTGGAAACAAGGTAAGGAAATTAGAGTTTTTGATGGCAGATGCAGT
GGCTCAAGGTGCTGATTGCATCATCACCATTGGAGGCATCCAAAGCAATC
ATTGTCGTGCTGCTGCCGTTGCTGCCAAGTATCTCAATCTTGATTGTTAT
CTTATTCTTCGCACCTCTAAGGTTCTGGTGGACCAAGATCCTGGTTTGAC
TGGCAATCTACTAGTTGAACGTTTAGTTGGAGCTCATATTGAACTTATCT
CTAAAGAAGAGTATTCAAAAATTGGGAGTGTGACTCTTACTAACATTTTA
AAAGAAAAGTTGCTAAAGGAAGGGAGAAGACCATATGTTATTCCTGTTGG
TGGGTCAAACTCAATAGGGACATGGGGTTATATTGAAGCAATTAAGGAGA
TTGAGCAGNCACTTCAGACTGGGACTGGTGGAGTGAAATTGATGATATTG
TTGTAGCTTGTGGCAGTGGAGGAACAATTGCTGGTTTGTCATTGGGGTCA
TGGCTTGGAACATTGAAAGCAAAAGTTCATGCTTTTTCTGTTTGTGATGA
CCCTGATTACTTCTACGACTATACCCAAGGGCTACTTGATGGGCTCAATG
CAGGAATTGACTCCCATGATTTGGTAAACATTCAAAATCCAAAGGTTCTG
GCTATAGCATCACATTTCGGAAGAACTAATTTTGTTAAAAAATTGGTGCC
GCAACGGGGGTAATTTTTGATCAGTTTAAAAGGGAAAAAATTGCCCTAGG
GGGAGTGGAAAAAAAAGGGCTTAAAAATCCCAAAAAAGGGGGGAAAGGGG
AGG
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