DY262577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_RHIRD (1-aminocyclopropane-1-carboxylate deaminase OS=Rhizobium radiobacter GN=acdS PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.332e-19 Identity = 54/151 (35.76%), Postives = 86/151 (56.95%), Query Frame = 2 Query: 356 NTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEI 802 + E+W KR+D SG+ + GNK+RKLE+++ DA+A AD +++IGG+QSNH R A A L + C L+ + D GN+L+ RL+GA ++ ++ IG + ++ EG +PY IP G S + G GY+ +E+ Sbjct: 30 DVEIWAKREDCNSGLAMGGNKLRKLEYIVPDAIASNADTLVSIGGVQSNHTRMVAAVAAKLGMKCRLVQESWVPHEDAVYDRVGNILMTRLMGADSRIV--DDGFDIGIRQSWEDAIQSVIDEGGKPYAIPAGASVHKYGGLGYVAFAEEV 178
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_BRAJA (1-aminocyclopropane-1-carboxylate deaminase OS=Bradyrhizobium japonicum GN=acdS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.272e-19 Identity = 58/169 (34.32%), Postives = 92/169 (54.44%), Query Frame = 2 Query: 314 PTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQ 808 PTPI K +L N E++ KR+D SG+ GNK+RKLE+++ DA+A AD +++IGG+QSNH R A A + + C L+ D GN+++ R++GA + L+ ++ IG E++ G +PY IP G S + G GY+ +E+ + Sbjct: 14 PTPIEKLERLSKHLGGNVEIYAKREDCNSGLAYGGNKLRKLEYIIPDAIASNADTLVSIGGVQSNHTRMIAAVAAKIGMKCRLVQEAWVPHEDAVYDRVGNIMLSRIMGADVRLV--DDGFDIGIRKSWEQAIEEVKAAGGKPYAIPAGASVHKYGGLGYVGFAEEVRK 180
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_METNO (1-aminocyclopropane-1-carboxylate deaminase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=acdS PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.968e-19 Identity = 57/167 (34.13%), Postives = 92/167 (55.09%), Query Frame = 2 Query: 314 PTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEI 802 PTPI + +L E++ KR+D SG+ GNK+RKLE+++ DA+A GAD +++IGG+QSNH R A A + + C L+ D GN+++ R++GA + L+ ++ IG + + + +G RPY IP G S + G GY+ +E+ Sbjct: 14 PTPIERLGRLSAHLGGQVELYAKREDCNSGLAFGGNKLRKLEYIVPDAIASGADTLVSIGGVQSNHTRMVAAVAAKIGMKCRLVQEAWVPHEDAVYDRVGNIMLSRILGADVRLV--DDGFDIGIRSSWQEAIDDVKAKGGRPYAIPAGASVHKFGGLGYVGFAEEV 178
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_SCHPO (Probable 1-aminocyclopropane-1-carboxylate deaminase OS=Schizosaccharomyces pombe GN=SPAC922.03 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 8.635e-19 Identity = 66/183 (36.07%), Postives = 97/183 (53.01%), Query Frame = 2 Query: 314 PTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEI-EQXLQTGTGGVKLMI 847 PTPI L E++ KR+D SG+ GNK+RKLE+L+ +A+ G D +++IGGIQSN R A A +L LDC LI D GN+ + R+V A + L S + IG E+L K+G++P+ IP G S + G G++ ++EI EQ Q G K+++ Sbjct: 15 PTPITSMKRLSKTLGGKVEIFAKREDCNSGLAFGGNKIRKLEYLIPEAIDGGYDTLVSIGGIQSNQTRQVAAVAAHLGLDCVLIQEDWVDYKDTMYDRVGNIELSRIVNADVRLDSSK--FDIGIRPSFKNALEELTKKGKKPFPIPAGCSEHPYGGLGFVGCVEEIYEQEKQLGFKFDKIVV 195
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_BURVG (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=acdS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 8.635e-19 Identity = 65/189 (34.39%), Postives = 98/189 (51.85%), Query Frame = 2 Query: 269 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQXL 814 +L P + + G PTPI K +L E++ KR+D SG+ GNK RKLE+L+ DA+AQGAD +++IGG+QSN R A A +L + C L+ D GN+ + R++GA + L++ + IG E + + G +PY IP G S +G G+ E ++E E L Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYDDPVYDRVGNIQLSRMMGADVRLVA--DGFDIGIRRSWEDAMESVRQAGGKPYPIPAGCSEHPLGGLGFVGFAEEVREQEAQL 186
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_AGRVS (1-aminocyclopropane-1-carboxylate deaminase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=acdS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 8.635e-19 Identity = 57/167 (34.13%), Postives = 90/167 (53.89%), Query Frame = 2 Query: 314 PTPIHKWN--LPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEI 802 PTPI K +L +++ KR+D SG+ GNK+RKLE+++ DA+A GAD +++IGG+QSNH R A A + C L+ D GN+++ R++GA + L+ ++ IG E++ G +PY IP G S + G GY+ +E+ Sbjct: 14 PTPIEKLERLTDHLGGKVQLYAKREDCNSGLAFGGNKLRKLEYIIPDAIASGADTLVSIGGVQSNHTRMVAAVAAKIGFKCRLVQEAWVPHEDAVYDRVGNIMLSRIMGADVRLV--DDGFDIGIRRSWEEAIEEVKAAGGKPYAIPAGASVHKYGGLGYVGFAEEV 178
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_RHILV (1-aminocyclopropane-1-carboxylate deaminase OS=Rhizobium leguminosarum bv. viciae GN=acdS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.128e-18 Identity = 60/169 (35.50%), Postives = 91/169 (53.85%), Query Frame = 2 Query: 314 PTPIHKWNLPNLPH----NTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEI 802 PTPI +LP L +++ KRDD SG+ + GNK+RKLE+++ DA+A GAD +++IGG+QSNH R A A + + C +I D GN+L+ +L+GA L+ E+ IG + + G +PY IP G S + G GY+ +E+ Sbjct: 16 PTPIE--HLPRLTAALGGKVDIYAKRDDCNSGLAMGGNKLRKLEYIVPDAIASGADTLVSIGGVQSNHTRMVAATAAKIGMKCVVIQEKWVPHYDAVYDRVGNILMTKLMGADSRLV--EDGFDIGIRKSWEDAIQSVEDAGGKPYAIPAGASVHKFGGLGYVGFAEEV 180
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_BURCM (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=acdS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.128e-18 Identity = 62/174 (35.63%), Postives = 92/174 (52.87%), Query Frame = 2 Query: 314 PTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQXL 814 PTPI K +L E++ KR+D SG+ GNK RKLE+L+ DA+AQGAD +++IGG+QSN R A A +L + C L+ D GN+ + R++GA + L++ + IG E + + G +PY IP G S +G G+ E ++E E L Sbjct: 15 PTPIQPLKRLSQHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVA--DGFDIGIRRSWEEAMESVRQAGGKPYPIPAGCSEHPLGGLGFVGFAEEVREQEAQL 186
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_BURCC (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia cenocepacia (strain MC0-3) GN=acdS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.128e-18 Identity = 66/190 (34.74%), Postives = 100/190 (52.63%), Query Frame = 2 Query: 269 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIE-QXLQTG 823 +L P + + G PTPI K +L E++ KR+D SG+ GNK RKLE+L+ DA+AQGAD +++IGG+QSN R A A +L + C L+ D GN+ + R++GA + L+S + IG E + + G +PY IP G S + +G G++ +E+ Q Q G Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVS--DGFDIGIRRSWEEAMESVRQAGGKPYPIPAGCSEHPLGGLGFVGFAEEVRAQEAQLG 187
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_METS4 (1-aminocyclopropane-1-carboxylate deaminase OS=Methylobacterium sp. (strain 4-46) GN=acdS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.473e-18 Identity = 56/167 (33.53%), Postives = 92/167 (55.09%), Query Frame = 2 Query: 314 PTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEI 802 PTPI + + +L +++ KR+D SG+ GNK+RKLE+++ DA+A GAD +++IGG+QSNH R A A + + C L+ D GN+++ R++GA + L+ E+ IG + ++ G +PY IP G S + G GY+ +E+ Sbjct: 14 PTPIERLSRLSAHLGGKVDLYAKREDCNSGLAFGGNKLRKLEYIVPDAIASGADTLVSIGGVQSNHTRMVAAVAAKIGMKCRLVQEAWVPHEDAVYDRVGNIMLSRIMGADVRLV--EDGFDIGIRSSWEQAIAEVKAAGGKPYAIPAGASVHKYGGLGYVGFAEEV 178 The following BLAST results are available for this feature:
BLAST of DY262577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262577 ID=DY262577; Name=DY262577; organism=Citrus clementina; type=EST; length=1203bpback to top |