DY262577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_BURPP (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=acdS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.778e-17 Identity = 61/184 (33.15%), Postives = 94/184 (51.09%), Query Frame = 2 Query: 269 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQ 808 +L P + + G PTPI K +L ++ KR+D SG GNK RKLE+L+ +A+AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L++ + IG E + G +PY IP G S + +G G++ +E+ Q Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLKRLSDHLGGKVHLYAKREDCNSGFAFGGNKTRKLEYLIPEALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVA--DGFDIGFRKSWEDALESVRAAGGKPYAIPAGCSDHPLGGLGFVGFAEEVRQ 181
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_BURP6 (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia pseudomallei (strain 668) GN=acdS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.778e-17 Identity = 61/174 (35.06%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 314 PTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSN----SIGTWGYIEAIKEIEQXL 814 PTPI K +L E++ KRDD SG+ GNK RKLE+L+ DA+AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L+ + IG + G +PY IP G S+ +G G+ E ++ E L Sbjct: 15 PTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLV--PDGFDIGFRKSWEDALADVRARGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAEL 186
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_BURP0 (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia pseudomallei (strain 1106a) GN=acdS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.778e-17 Identity = 61/174 (35.06%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 314 PTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSN----SIGTWGYIEAIKEIEQXL 814 PTPI K +L E++ KRDD SG+ GNK RKLE+L+ DA+AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L+ + IG + G +PY IP G S+ +G G+ E ++ E L Sbjct: 15 PTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLV--PDGFDIGFRKSWEDALADVRARGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAEL 186
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_BURMS (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia mallei (strain SAVP1) GN=acdS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.778e-17 Identity = 61/174 (35.06%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 314 PTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSN----SIGTWGYIEAIKEIEQXL 814 PTPI K +L E++ KRDD SG+ GNK RKLE+L+ DA+AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L+ + IG + G +PY IP G S+ +G G+ E ++ E L Sbjct: 15 PTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLV--PDGFDIGFRKSWEDALADVRARGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAEL 186
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_BURMA (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia mallei GN=acdS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.778e-17 Identity = 61/174 (35.06%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 314 PTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSN----SIGTWGYIEAIKEIEQXL 814 PTPI K +L E++ KRDD SG+ GNK RKLE+L+ DA+AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L+ + IG + G +PY IP G S+ +G G+ E ++ E L Sbjct: 15 PTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLV--PDGFDIGFRKSWEDALADVRARGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAEL 186
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_BURM9 (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia mallei (strain NCTC 10229) GN=acdS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.778e-17 Identity = 61/174 (35.06%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 314 PTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSN----SIGTWGYIEAIKEIEQXL 814 PTPI K +L E++ KRDD SG+ GNK RKLE+L+ DA+AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L+ + IG + G +PY IP G S+ +G G+ E ++ E L Sbjct: 15 PTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLV--PDGFDIGFRKSWEDALADVRARGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAEL 186
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_BURM7 (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia mallei (strain NCTC 10247) GN=acdS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.778e-17 Identity = 61/174 (35.06%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 314 PTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGSN----SIGTWGYIEAIKEIEQXL 814 PTPI K +L E++ KRDD SG+ GNK RKLE+L+ DA+AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L+ + IG + G +PY IP G S+ +G G+ E ++ E L Sbjct: 15 PTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLV--PDGFDIGFRKSWEDALADVRARGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAEL 186
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_AGRRK (1-aminocyclopropane-1-carboxylate deaminase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=acdS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.778e-17 Identity = 56/167 (33.53%), Postives = 90/167 (53.89%), Query Frame = 2 Query: 314 PTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEI 802 PT I K +L +++ KR+D SG+ GNK+RKLE+++ DA+A AD +++IGG+QSNH R A A + C L+ + D GN+L+ R++GA ++++ +E IG E + +G +PY IP G S + G GY+ +E+ Sbjct: 14 PTHIEKLERLSEHLGGKVQLYAKREDCNSGLAFGGNKLRKLEYIIPDAIASNADTLVSIGGVQSNHTRMIAAVAAKIGFKCRLVQESWVPHEDAVYDRVGNILLSRIMGADVQMV--DEGFDIGIRQSWEEAIEDVKAKGGKPYPIPAGASVHKYGGLGYVGFAEEV 178
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_VARPS (1-aminocyclopropane-1-carboxylate deaminase OS=Variovorax paradoxus (strain S110) GN=acdS PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.738e-17 Identity = 64/189 (33.86%), Postives = 93/189 (49.21%), Query Frame = 2 Query: 269 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQXL 814 +L P H + G PTPIH K +L E++ KR+D SG+ GNK RKLE+L+ +A+ G D +++IGGIQSN R A A +L L C L+ D GN+ + R++GA + L S IG + K G +P+ IP G S +G G+ E +++ E L Sbjct: 2 NLKKFPRHALTFG--PTPIHPLKRLSAHLGGEVELYAKREDCNSGLAFGGNKTRKLEYLIPEALEGGYDTLVSIGGIQSNQTRQVAAVAAHLGLKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDSAG--FDIGIRKSWEEAMADVRKAGGKPFPIPAGCSEHPRGGLGFVGFAEEVRQQEAEL 186
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_BRASO (1-aminocyclopropane-1-carboxylate deaminase OS=Bradyrhizobium sp. (strain ORS278) GN=acdS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 8.082e-17 Identity = 58/175 (33.14%), Postives = 92/175 (52.57%), Query Frame = 2 Query: 296 FSLGHFPTPIHKWNLPNLPH----NTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEI 802 +SL TPI +LP L +++ KRDD SG+ + GNK+RKLE+++ DA+ AD +++IGG+QSNH R A A + + C ++ + D GN+L+ RL+GA ++ E+ IG + + G +PY IP G S + G GY+ +E+ Sbjct: 10 YSLTFGVTPIE--HLPRLTAALGGKVQIYAKRDDCNSGLAMGGNKLRKLEYIVPDAIESNADTLVSIGGVQSNHTRMVAATAAKIGMKCVVVQESWVPHEDAVYDRVGNILMTRLMGADSRIV--EDGFDIGIRKSWENAIQSVKDAGGKPYGIPAGASVHKFGGLGYVGFAEEV 180 The following BLAST results are available for this feature:
BLAST of DY262577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262577 ID=DY262577; Name=DY262577; organism=Citrus clementina; type=EST; length=1203bpback to top |