DY262577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_PSES0 (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas sp. (strain 6G5) GN=acdS PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.524e-15 Identity = 54/171 (31.58%), Postives = 90/171 (52.63%), Query Frame = 2 Query: 317 TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQXL 814 TP+ + + +L E++ KR+D SG+ GNK RKLE+L+ +A+ QG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L + IG ++++G +P+ IP G S +G G+ E +++ E+ L Sbjct: 19 TPLKRLS-QHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEAIEQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDAAG--FDIGIRPSWEKAMSDVVEQGGKPFPIPAGCSEHPYGGLGFVGFAEEVRQQEKEL 186
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_PSEFL (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas fluorescens GN=acdS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.991e-15 Identity = 55/171 (32.16%), Postives = 89/171 (52.05%), Query Frame = 2 Query: 317 TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQXL 814 TP+ + + +L E++ KR+D SG+ GNK RKLE+L+ +A+ QG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L + IG +++ G +P+ IP G S +G G+ E ++E E+ L Sbjct: 19 TPLKRLS-EHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEALEQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDAAG--FDIGIRPSWEKAMNDVVERGGKPFPIPAGCSEHPYGGLGFVGFAEEVREQEKQL 186
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_PSEPU (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas putida GN=acdS PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.600e-15 Identity = 54/171 (31.58%), Postives = 89/171 (52.05%), Query Frame = 2 Query: 317 TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS----NSIGTWGYIEAIKEIEQXL 814 TP+ + + +L E++ KR+D SG+ GNK RKLE+L+ +A+ QG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L + IG +++ G +P+ IP G S +G G+ E +++ E+ L Sbjct: 19 TPLKRLS-EHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEAIEQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDAAG--FDIGIRPSWEKAMSDVVERGGKPFPIPAGCSEHPYGGLGFVGFAEEVRQQEKEL 186
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_ENTCL (1-aminocyclopropane-1-carboxylate deaminase OS=Enterobacter cloacae GN=acdS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.435e-15 Identity = 53/166 (31.93%), Postives = 88/166 (53.01%), Query Frame = 2 Query: 317 TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQ 808 TP+ + + +L E++ KR+D SG+ GNK RKLE+L+ +A+ QG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L + IG ++++G +P+ IP G S + G G++ K++ Q Sbjct: 19 TPLKRLS-QHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEAIEQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDAAG--FDIGIRPSWEKAMSDVVEQGGKPFPIPAGCSEHPYGGLGFVGFAKKLRQ 181
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_PSESM (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas syringae pv. tomato GN=acdS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 8.364e-14 Identity = 55/183 (30.05%), Postives = 92/183 (50.27%), Query Frame = 2 Query: 269 HLTPIPSHVFSLGHFP-TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQ 808 +L+ + + G P TP+ + + +L +++ KR+D SG+ GNK RKLE+L+ +A+ G D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L S IG +++ G +P+ IP G S + G G++ E+ Q Sbjct: 2 NLSKFKRYPLTFGPSPITPLKRLS-EHLGGKVDLYAKREDCNSGLAFGGNKTRKLEYLVPEAIEGGYDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDALYDRVGNIEMSRIMGADVRLDSAG--FDIGIRPSWEKAMADVVESGGKPFPIPAGCSEHPYGGLGFVRFADEVRQ 181
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_PSE14 (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=acdS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.092e-13 Identity = 56/183 (30.60%), Postives = 91/183 (49.73%), Query Frame = 2 Query: 269 HLTPIPSHVFSLGHFP-TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQ 808 +L+ + + G P TP+ + + +L E++ KR+D SG+ GNK RKLE+L+ +A+ G D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L S IG + + G +P+ IP G S + G G++ E+ Q Sbjct: 2 NLSKFKRYPLTFGPSPITPLKRLS-EHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPEAIDGGYDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDALYDRVGNIEMSRIMGADVRLDSAG--FDIGIRPSWEKAMSDVEESGGKPFPIPAGCSEHPYGGLGFVRFADEVRQ 181
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_PSEU2 (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=acdS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.427e-13 Identity = 56/183 (30.60%), Postives = 91/183 (49.73%), Query Frame = 2 Query: 269 HLTPIPSHVFSLGHFP-TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKEEYSKIGSVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKEIEQ 808 +L+ + + G P TP+ + + +L E++ KR+D SG+ GNK RKLE+L+ +A+ G D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L S IG + + G +P+ IP G S + G G++ E+ Q Sbjct: 2 NLSKFKRYPLTFGPSPITPLKRLS-EHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPEAIDGGYDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDALYDRVGNIEMSRIMGADVRLDSAG--FDIGIRPSWEKAMADVEESGGKPFPIPAGCSEHPYGGLGFVRFADEVRQ 181
BLAST of DY262577 vs. ExPASy Swiss-Prot
Match: 1A1D_WILSA (1-aminocyclopropane-1-carboxylate deaminase OS=Williopsis saturnus PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.022e-11 Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 314 PTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGL---TGNLLVERLVGAHIELISKEEYSKIG-SVTLTNILKEKLLKEGRRPYVIPVGGS-NSIGTWGYIEAIKE-IEQXLQTGTGGVKLMI 847 P+PI N +L V+ KR+D SG+ GNK+RKLE+++ D V +++IGG QSN R A A L C LI + + + + GN+ + R++GA + +I E+ IG + N L+E L G +PY IP G S + G G++ E I Q ++ G K+++ Sbjct: 15 PSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDYTHLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVI--EDGFDIGMRKSFANALQE-LEDAGHKPYPIPAGCSEHKYGGLGFVGFADEVINQEVELGIKFDKIVV 198 The following BLAST results are available for this feature:
BLAST of DY262577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262577 ID=DY262577; Name=DY262577; organism=Citrus clementina; type=EST; length=1203bpback to top |