DY262594

Overview
NameDY262594
Unique NameDY262594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1283
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 2.472e-19
Identity = 51/147 (34.69%), Postives = 83/147 (56.46%), Query Frame = 1
Query:  571 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQI-----------VGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            DRD    N L+  Y+RLG++  A  +F KM    +V+W  MI GY     + +AL +  +MQ            V ++P+ I+++ ILP+CA L +L  G+ IH Y  K +L     + +AL++MY KCGC   + ++FDQ+ +++V
Sbjct:  437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNV 583          

HSP 2 Score: 91.6633 bits (226), Expect = 1.039e-17
Identity = 65/207 (31.40%), Postives = 98/207 (47.34%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSIT-ENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQL---GSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            I PD +  P ++K+   L    LGKQIHAHV KFG    S+T  N L++LY KC +    +KVF+ +++R+ V+WN+LIS              F+K                     +  AL+ FR M    +EP   ++V ++ AC+ L     L +G+ +H Y  +K  L   +I N L+ MY K G    +  L      RD+
Sbjct:   93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS----------FEK---------------------WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDL 267          

HSP 3 Score: 90.5077 bits (223), Expect = 2.314e-17
Identity = 57/202 (28.22%), Postives = 98/202 (48.51%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            PD+FT+  V+ +C  L     GK++HA+  K G L  +S   +AL+D+Y  C +++   +VF+ M DR I  WN +I+GY++    K+A +LF  M                               +  G+  +  ++  ++PAC + G+    E IH +  K+ L R   + N L++MY + G    A ++F +M  RD+
Sbjct:  300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME------------------------------ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471          

HSP 4 Score: 85.1149 bits (209), Expect = 9.721e-16
Identity = 55/205 (26.83%), Postives = 92/205 (44.88%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPS---LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKK-SLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            P  FTL  V+ +C  L  P    +GKQ+HA    +GL+   +    +                            N L++ Y +LG++  +++L        +V+W  ++          EAL+  R+M + G+EPDE +I  +LPAC+ L  L  G+ +H Y  K  SL   + + +AL++MY  C       ++FD M  R +
Sbjct:  197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHA----YGLRKGELNSFII----------------------------NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369          

HSP 5 Score: 80.8777 bits (198), Expect = 1.833e-14
Identity = 40/154 (25.97%), Postives = 75/154 (48.70%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELG 837
            P+  TL  ++ SC  L   + GK+IHA+  K  L +     +AL+D+Y KC                               G ++ +R +FD++P   +++W  +I+ Y   G+  EA+D+ R M + G++P+E++ + +  AC+  G ++ G
Sbjct:  515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC-------------------------------GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP197_ARATH (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana GN=PCMP-E26 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 4.217e-19
Identity = 65/200 (32.50%), Postives = 96/200 (48.00%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQ--IVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQM 963
            +LPD FTL  VI  C  L   + GK +HA + K  ++S S  E+ALL LY KC    +A+ VF+ M ++D+VAW +LISG  + G+ K                               EAL VF  M+     ++PD   +  +  ACA L +L  G  +H    K  L+    + ++LI++Y KCG    A ++F  M
Sbjct:  369 VLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFK-------------------------------EALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSM 537          

HSP 2 Score: 71.633 bits (174), Expect = 1.112e-11
Identity = 46/180 (25.56%), Postives = 76/180 (42.22%), Query Frame = 1
Query:  439 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            G+QIH  V K GL +      +LL +Y KC                               G + +A  +F  +    +  W AM+  YA       ALD+F  M+   + PD  ++  ++  C+ LG    G+ +H    K+ +   + I +AL+ +Y KCGC   A  +F  M ++D+
Sbjct:  291 GRQIHCDVVKMGLHNDPYVCTSLLSMYSKC-------------------------------GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDM 439          

HSP 3 Score: 71.2478 bits (173), Expect = 1.453e-11
Identity = 47/168 (27.98%), Postives = 78/168 (46.43%), Query Frame = 1
Query:  343 LYNPRAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT----TIVSWTAMILGYAHIGSYAEALDVFRQM-QIVGIEPDEISIVPILPACAQLGSLE 831
            L+N      I PD  ++  V+ +         GK +H +  + G+ S +  +NAL+D+Y KC     A  +F++M  + ++ WN +I GY   G    A  LFD+M         V++ ++I    H G   E  ++F  M Q  GIEP+      ++    + G LE
Sbjct:  564 LFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLE 731          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP415_ARATH (Pentatricopeptide repeat-containing protein At5g43790 OS=Arabidopsis thaliana GN=PCMP-E30 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.507e-19
Identity = 61/209 (29.19%), Postives = 101/209 (48.33%), Query Frame = 1
Query:  364 SLILPDKFTLPFVIK-SCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAH---IGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            + + P++FT P + K S         G+ +HAHV KF                              E  + D      L+  YA  G++++AR LF+++    + +W  ++  YA+   I S  E L +F +MQ+    P+E+S+V ++ +CA LG    G W H+Y  K +L     +  +LI++Y KCGC   A ++FD+M +RDV
Sbjct:  106 NFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKF-----------------------------LEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQV---RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDV 282          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP309_ARATH (Pentatricopeptide repeat-containing protein At4g14170 OS=Arabidopsis thaliana GN=PCMP-E17 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 5.507e-19
Identity = 61/205 (29.76%), Postives = 91/205 (44.39%), Query Frame = 1
Query:  364 SLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            S + PD FTLP ++++C        G  IH    K G  S     +AL+ +Y                                 +G++  AR LFD MP    V +TAM  GY   G     L +FR+M   G   D + +V +L AC QLG+L+ G+ +H +C ++       + NA+ +MY+KC     A  +F  M +RDV
Sbjct:  128 SCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY-------------------------------VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDV 301          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP267_ARATH (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.507e-19
Identity = 62/209 (29.67%), Postives = 98/209 (46.89%), Query Frame = 1
Query:  355 RAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVG-IEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            R  S +  +  +  F +K C+       G QIH  +   G  S S+    L+DLY  C+   +A KVF+E+  RD V+WN L S Y R  + +   +LFDKM                             +  + G ++PD ++ +  L ACA LG+L+ G+ +H + D+  L     + N L+ MY +CG   +A Q+F  M +R+V
Sbjct:  104 RRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM-----------------------------KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNV 283          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PPR75_ARATH (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.193e-19
Identity = 52/178 (29.21%), Postives = 99/178 (55.62%), Query Frame = 1
Query:  466 KFGLKSHSITENALLDLYGKCDELI---EAHKVFEEMTDR---DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVF 981
            K G+ ++ +T  ++L   GK +++      H ++ E T R   D+   ++L+  Y +      A+ +FD+MP   +V+WTA+I GY     + + + VF +M    + P+E ++  +L ACA +G+L  G  +H Y  K S+   T     LI++Y+KCGC  +A  +F+++ +++V+
Sbjct:  197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLE-TGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVY 373          

HSP 2 Score: 93.9745 bits (232), Expect = 2.093e-18
Identity = 62/204 (30.39%), Postives = 99/204 (48.53%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIH-MYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            ++P + T P ++K+ V  L  S   Q HAH+ KFGL                               D D    N+LISGY+  G    A  LFD      +V+WTAMI G+   GS +EA+  F +M+  G+  +E+++V +L A  ++  +  G  +H +Y +   +     I ++L++MY KC C   A ++FD+M  R+V
Sbjct:  100 VIPSRHTFPPLLKA-VFKLRDSNPFQFHAHIVKFGL-------------------------------DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNV 271          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP188_ARATH (Pentatricopeptide repeat-containing protein At2g36730 OS=Arabidopsis thaliana GN=PCMP-E44 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.193e-19
Identity = 61/204 (29.90%), Postives = 99/204 (48.53%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVF 981
            I P+K T PF++K+C   L  + G+QI   V K G        N L+ LYG C +  +A KVF+EMT+R++V+WN++++     G   K  ++F                            + F +M      PDE ++V +L AC   G+L LG+ +H     + L     +  AL++MY K G    A  +F++MV ++V+
Sbjct:  109 IKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENG---KLNLVF----------------------------ECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVW 279          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.394e-19
Identity = 61/203 (30.05%), Postives = 96/203 (47.29%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            +LPD  T   ++ S          KQIH ++ +  +       +AL+D Y KC  +  A  +F +    D+V +                               TAMI GY H G Y ++L++FR +  V I P+EI++V ILP    L +L+LG  +H +  KK    R  I  A+I+MY KCG  + A ++F+++ KRD+
Sbjct:  336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF-------------------------------TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDI 507          

HSP 2 Score: 88.1965 bits (217), Expect = 1.148e-16
Identity = 62/213 (29.11%), Postives = 96/213 (45.07%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVFHGVP*LEAC 1008
            I P++ TL  ++     LL   LG+++H  + K G  +      A++D+Y KC                               G+M  A  +F+++    IVSW +MI   A   + + A+D+FRQM + GI  D +SI   L ACA L S   G+ IH +  K SL       + LI+MY KCG    A  +F  M ++++      + AC
Sbjct:  437 ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC-------------------------------GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAAC 618          

HSP 3 Score: 77.0258 bits (188), Expect = 2.647e-13
Identity = 55/203 (27.09%), Postives = 82/203 (40.39%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            I P+  T   V+  C   L   LG Q+H  V   G+      +N+LL +Y                               ++ G+   A  LF  M     V+W  MI GY   G   E+L  F +M   G+ PD I+   +LP+ ++  +LE  + IH Y  + S+     + +ALI+ Y KC     A  +F Q    DV
Sbjct:  235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY-------------------------------SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406          

HSP 4 Score: 75.485 bits (184), Expect = 7.702e-13
Identity = 44/156 (28.21%), Postives = 78/156 (50.00%), Query Frame = 1
Query:  379 DKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT-----IVSWTAMILGYAHIGSYAEALDVFRQM-QIVGIEPDEISIVPILPACAQLGSL 828
            D  ++   + +C  L   S GK IH  + K  L S   +E+ L+D+Y KC  L  A  VF+ M +++IV+WN++I+     G++K +  LF +M   +      +++  +I    H+G   E +  FR M +  GI+P +     ++    + G L
Sbjct:  541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRL 696          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.008e-18
Identity = 62/207 (29.95%), Postives = 93/207 (44.93%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIE----PDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            +LPD FT P VIK+C G+    +G  +H  V K GL                                 D+   N L+S Y   G +  A  LFD MP   +VSW +MI  ++  G   E+  +  +M     +    PD  ++V +LP CA+   + LG+ +H +  K  L +  V+ NAL++MY KCGC   A  +F     ++V
Sbjct:  183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-------------------------------DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358          

HSP 2 Score: 22.3274 bits (46), Expect = 1.008e-18
Identity = 7/15 (46.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  960 DGKERCVSWSTMIGG 1004
            +  +  VSW+TM+GG
Sbjct:  353 NNNKNVVSWNTMVGG 367          

HSP 3 Score: 94.3597 bits (233), Expect = 1.602e-18
Identity = 61/201 (30.35%), Postives = 97/201 (48.26%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKR 972
            +LPD FT+  ++ +C  L    LGK++H  + +  L                               +RD+  + +++S Y   G++   + LFD M   ++VSW  +I GY   G    AL VFRQM + GI+   IS++P+  AC+ L SL LG   H Y  K  L     I  +LI+MY K G   Q+S++F+ + ++
Sbjct:  492 LLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL-------------------------------ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEK 661          

HSP 4 Score: 78.1814 bits (191), Expect = 1.188e-13
Identity = 43/142 (30.28%), Postives = 76/142 (53.52%), Query Frame = 1
Query:  538 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQM 963
            +  + + +E    ++VA N  ++ YA+ G +  A+ +F  +   T+ SW A+I G+A       +LD   QM+I G+ PD  ++  +L AC++L SL LG+ +H +  +  L R   +  +++ +YI CG       LFD M
Sbjct:  417 LHCYSLKQEFVYNELVA-NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 557          

HSP 5 Score: 72.4034 bits (176), Expect = 6.520e-12
Identity = 50/196 (25.51%), Postives = 80/196 (40.82%), Query Frame = 1
Query:  373 LPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVG--IEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLF 954
            +PD  TL  V+  C       LGK +H    K  L    +  NAL+D+                               Y++ G +  A+M+F       +VSW  M+ G++  G      DV RQM   G  ++ DE++I+  +P C     L   + +H Y  K+  +   ++ NA +  Y KCG    A ++F
Sbjct:  289 MPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM-------------------------------YSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 453          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PPR80_ARATH (Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.227e-18
Identity = 66/220 (30.00%), Postives = 101/220 (45.91%), Query Frame = 1
Query:  388 TLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGS-------------------------------YAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLF 954
            TL  + K+C   +    G QIH  V +  L+      N+L+ +Y K   + EA  VF  M ++D V+WN+LI+G  +  Q+ +A  LF+KMP   +VSWT MI G++  G                                Y EAL  F +M    + P+  +   +L A A L  L  G  IH    K +++    + N+L+ MY KCG  + A ++F
Sbjct:  277 TLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496          

HSP 2 Score: 84.3445 bits (207), Expect = 1.658e-15
Identity = 47/164 (28.66%), Postives = 86/164 (52.44%), Query Frame = 1
Query:  487 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVG-IEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRD 975
            S+  N LL  Y +  +  EA +VF+ M  +++V+ ++++ GY ++G++  AR LFD+M    +++WTAMI GY   G + +   +F +M+  G ++ +  ++  +  AC        G  IH    +  L     + N+L+ MY K G   +A  +F  M  +D
Sbjct:  177 SVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340          
The following BLAST results are available for this feature:
BLAST of DY262594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PP285_ARATH2.472e-1934.69Pentatricopeptide repeat-containing protein At3g57... [more]
PP197_ARATH4.217e-1932.50Pentatricopeptide repeat-containing protein At2g40... [more]
PP415_ARATH5.507e-1929.19Pentatricopeptide repeat-containing protein At5g43... [more]
PP309_ARATH5.507e-1929.76Pentatricopeptide repeat-containing protein At4g14... [more]
PP267_ARATH5.507e-1929.67Pentatricopeptide repeat-containing protein At3g47... [more]
PPR75_ARATH7.193e-1929.21Pentatricopeptide repeat-containing protein At1g50... [more]
PP188_ARATH7.193e-1929.90Pentatricopeptide repeat-containing protein At2g36... [more]
PP333_ARATH9.394e-1930.05Pentatricopeptide repeat-containing protein At4g21... [more]
PPR48_ARATH1.008e-1829.95Pentatricopeptide repeat-containing protein At1g18... [more]
PPR80_ARATH1.227e-1830.00Pentatricopeptide repeat-containing protein At1g53... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BF07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262594 ID=DY262594; Name=DY262594; organism=Citrus clementina; type=EST; length=1283bp
ACTAAACCTAAAAATGAATTAAAAAACAACAAAAAAATCGTGACCCTGCA
GCCCTCACTTTTCTATTCACTGCAGCCCTCACTCTCAATCCAGTTCACTG
CAGCTCCCTCTTTCCCCTCAATTTTCTCAATCCAGTTGCAGCAAATCTCT
CTCTTGGTCGCTCTTGGTGTGCTAGCCACTGCCGCTGCTCTTTCTCCGCC
GTAACCGCTGCTGCTCCGACTCTGTCCAGCTGCTGCTACTCGGACTCCGT
CCAGCTGCTGCTACTTCGTTTTTGCTCTCTTGGATCTGCACTTGCTCTCT
CGGATCTTCATCTACTGCTACTTCATTGTCACTTGCCGGTAATTATATAA
CCCACGAGCTGGAAGCCTAATTTTGCCTGATAAATTTACATTACCGTTTG
TGATTAAATCATGTGTGGGGCTGTTGTGTCCTTCCCTGGGAAAGCAAATT
CATGCCCATGTGTGTAAATTTGGGCTGAAGTCGCATTCCATAACAGAGAA
TGCACTTCTAGATTTGTATGGAAAATGTGATGAGCTAATTGAGGCACACA
AAGTGTTCGAGGAAATGACTGATAGAGATATAGTTGCTTGGAATAATCTT
ATTTCTGGGTATGCTAGATTGGGTCAAATGAAGAAAGCAAGAATGCTATT
TGATAAGATGCCTTATACGACTATTGTCTCATGGACTGCAATGATTTTGG
GGTATGCACATATAGGGAGCTATGCTGAAGCACTGGATGTATTTCGGCAA
ATGCAAATAGTGGGTATTGAACCTGATGAGATAAGTATCGTACCTATTTT
GCCAGCTTGTGCACAACTAGGATCTCTTGAGCTAGGGGAATGGATTCATA
TGTATTGTGATAAAAAATCACTGTTGCGGAGGACTGTTATTTGCAATGCT
CTCATCGAAATGTACATAAAATGTGGGTGCATNCATCAAGCAAGTCAGCT
GTTTGATCAGATGGTAAAGAGAGATGTGTTTCATGGAGTACCATGATTGG
AGGCTTGCAAATCATGCAAAGCTCAAAAACATTCATCTATTTCAGAATGC
AAAAAGAAATTGCACTTTTAAGGGCCAGAATACATCTAAAGGAAAAATTG
GAACAGTAATTTTTTAAAATAATTGGTTAAAACAGGGGGTGAAAAAAAAA
CCAAAATTAAAAAGGAAAAAAAAGGAAAAAGGTAAAATTTCTTTTTTAAA
AAAGTTAAATTTTAAAAATTTTTAAAATAAGGAAATTTTTTTTATAAAAA
AAAATTTTGGTTTAAAAAAAATTTTTTGTGTGT
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