DY262594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 2.472e-19 Identity = 51/147 (34.69%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 571 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQI-----------VGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978 DRD N L+ Y+RLG++ A +F KM +V+W MI GY + +AL + +MQ V ++P+ I+++ ILP+CA L +L G+ IH Y K +L + +AL++MY KCGC + ++FDQ+ +++V Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNV 583 HSP 2 Score: 91.6633 bits (226), Expect = 1.039e-17 Identity = 65/207 (31.40%), Postives = 98/207 (47.34%), Query Frame = 1 Query: 370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSIT-ENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQL---GSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978 I PD + P ++K+ L LGKQIHAHV KFG S+T N L++LY KC + +KVF+ +++R+ V+WN+LIS F+K + AL+ FR M +EP ++V ++ AC+ L L +G+ +H Y +K L +I N L+ MY K G + L RD+ Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS----------FEK---------------------WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDL 267 HSP 3 Score: 90.5077 bits (223), Expect = 2.314e-17 Identity = 57/202 (28.22%), Postives = 98/202 (48.51%), Query Frame = 1 Query: 376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978 PD+FT+ V+ +C L GK++HA+ K G L +S +AL+D+Y C +++ +VF+ M DR I WN +I+GY++ K+A +LF M + G+ + ++ ++PAC + G+ E IH + K+ L R + N L++MY + G A ++F +M RD+ Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME------------------------------ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471 HSP 4 Score: 85.1149 bits (209), Expect = 9.721e-16 Identity = 55/205 (26.83%), Postives = 92/205 (44.88%), Query Frame = 1 Query: 376 PDKFTLPFVIKSCVGLLCPS---LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKK-SLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978 P FTL V+ +C L P +GKQ+HA +GL+ + + N L++ Y +LG++ +++L +V+W ++ EAL+ R+M + G+EPDE +I +LPAC+ L L G+ +H Y K SL + + +AL++MY C ++FD M R + Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHA----YGLRKGELNSFII----------------------------NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369 HSP 5 Score: 80.8777 bits (198), Expect = 1.833e-14 Identity = 40/154 (25.97%), Postives = 75/154 (48.70%), Query Frame = 1 Query: 376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELG 837 P+ TL ++ SC L + GK+IHA+ K L + +AL+D+Y KC G ++ +R +FD++P +++W +I+ Y G+ EA+D+ R M + G++P+E++ + + AC+ G ++ G Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC-------------------------------GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP197_ARATH (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana GN=PCMP-E26 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.217e-19 Identity = 65/200 (32.50%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQ--IVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQM 963 +LPD FTL VI C L + GK +HA + K ++S S E+ALL LY KC +A+ VF+ M ++D+VAW +LISG + G+ K EAL VF M+ ++PD + + ACA L +L G +H K L+ + ++LI++Y KCG A ++F M Sbjct: 369 VLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFK-------------------------------EALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSM 537 HSP 2 Score: 71.633 bits (174), Expect = 1.112e-11 Identity = 46/180 (25.56%), Postives = 76/180 (42.22%), Query Frame = 1 Query: 439 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978 G+QIH V K GL + +LL +Y KC G + +A +F + + W AM+ YA ALD+F M+ + PD ++ ++ C+ LG G+ +H K+ + + I +AL+ +Y KCGC A +F M ++D+ Sbjct: 291 GRQIHCDVVKMGLHNDPYVCTSLLSMYSKC-------------------------------GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDM 439 HSP 3 Score: 71.2478 bits (173), Expect = 1.453e-11 Identity = 47/168 (27.98%), Postives = 78/168 (46.43%), Query Frame = 1 Query: 343 LYNPRAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT----TIVSWTAMILGYAHIGSYAEALDVFRQM-QIVGIEPDEISIVPILPACAQLGSLE 831 L+N I PD ++ V+ + GK +H + + G+ S + +NAL+D+Y KC A +F++M + ++ WN +I GY G A LFD+M V++ ++I H G E ++F M Q GIEP+ ++ + G LE Sbjct: 564 LFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLE 731
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP415_ARATH (Pentatricopeptide repeat-containing protein At5g43790 OS=Arabidopsis thaliana GN=PCMP-E30 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.507e-19 Identity = 61/209 (29.19%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 364 SLILPDKFTLPFVIK-SCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAH---IGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978 + + P++FT P + K S G+ +HAHV KF E + D L+ YA G++++AR LF+++ + +W ++ YA+ I S E L +F +MQ+ P+E+S+V ++ +CA LG G W H+Y K +L + +LI++Y KCGC A ++FD+M +RDV Sbjct: 106 NFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKF-----------------------------LEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQV---RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDV 282
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP309_ARATH (Pentatricopeptide repeat-containing protein At4g14170 OS=Arabidopsis thaliana GN=PCMP-E17 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 5.507e-19 Identity = 61/205 (29.76%), Postives = 91/205 (44.39%), Query Frame = 1 Query: 364 SLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978 S + PD FTLP ++++C G IH K G S +AL+ +Y +G++ AR LFD MP V +TAM GY G L +FR+M G D + +V +L AC QLG+L+ G+ +H +C ++ + NA+ +MY+KC A +F M +RDV Sbjct: 128 SCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY-------------------------------VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDV 301
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP267_ARATH (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.507e-19 Identity = 62/209 (29.67%), Postives = 98/209 (46.89%), Query Frame = 1 Query: 355 RAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVG-IEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978 R S + + + F +K C+ G QIH + G S S+ L+DLY C+ +A KVF+E+ RD V+WN L S Y R + + +LFDKM + + G ++PD ++ + L ACA LG+L+ G+ +H + D+ L + N L+ MY +CG +A Q+F M +R+V Sbjct: 104 RRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM-----------------------------KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNV 283
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PPR75_ARATH (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.193e-19 Identity = 52/178 (29.21%), Postives = 99/178 (55.62%), Query Frame = 1 Query: 466 KFGLKSHSITENALLDLYGKCDELI---EAHKVFEEMTDR---DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVF 981 K G+ ++ +T ++L GK +++ H ++ E T R D+ ++L+ Y + A+ +FD+MP +V+WTA+I GY + + + VF +M + P+E ++ +L ACA +G+L G +H Y K S+ T LI++Y+KCGC +A +F+++ +++V+ Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLE-TGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVY 373 HSP 2 Score: 93.9745 bits (232), Expect = 2.093e-18 Identity = 62/204 (30.39%), Postives = 99/204 (48.53%), Query Frame = 1 Query: 370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIH-MYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978 ++P + T P ++K+ V L S Q HAH+ KFGL D D N+LISGY+ G A LFD +V+WTAMI G+ GS +EA+ F +M+ G+ +E+++V +L A ++ + G +H +Y + + I ++L++MY KC C A ++FD+M R+V Sbjct: 100 VIPSRHTFPPLLKA-VFKLRDSNPFQFHAHIVKFGL-------------------------------DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNV 271
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP188_ARATH (Pentatricopeptide repeat-containing protein At2g36730 OS=Arabidopsis thaliana GN=PCMP-E44 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.193e-19 Identity = 61/204 (29.90%), Postives = 99/204 (48.53%), Query Frame = 1 Query: 370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVF 981 I P+K T PF++K+C L + G+QI V K G N L+ LYG C + +A KVF+EMT+R++V+WN++++ G K ++F + F +M PDE ++V +L AC G+L LG+ +H + L + AL++MY K G A +F++MV ++V+ Sbjct: 109 IKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENG---KLNLVF----------------------------ECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVW 279
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 9.394e-19 Identity = 61/203 (30.05%), Postives = 96/203 (47.29%), Query Frame = 1 Query: 370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978 +LPD T ++ S KQIH ++ + + +AL+D Y KC + A +F + D+V + TAMI GY H G Y ++L++FR + V I P+EI++V ILP L +L+LG +H + KK R I A+I+MY KCG + A ++F+++ KRD+ Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF-------------------------------TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDI 507 HSP 2 Score: 88.1965 bits (217), Expect = 1.148e-16 Identity = 62/213 (29.11%), Postives = 96/213 (45.07%), Query Frame = 1 Query: 370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVFHGVP*LEAC 1008 I P++ TL ++ LL LG+++H + K G + A++D+Y KC G+M A +F+++ IVSW +MI A + + A+D+FRQM + GI D +SI L ACA L S G+ IH + K SL + LI+MY KCG A +F M ++++ + AC Sbjct: 437 ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC-------------------------------GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAAC 618 HSP 3 Score: 77.0258 bits (188), Expect = 2.647e-13 Identity = 55/203 (27.09%), Postives = 82/203 (40.39%), Query Frame = 1 Query: 370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978 I P+ T V+ C L LG Q+H V G+ +N+LL +Y ++ G+ A LF M V+W MI GY G E+L F +M G+ PD I+ +LP+ ++ +LE + IH Y + S+ + +ALI+ Y KC A +F Q DV Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY-------------------------------SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406 HSP 4 Score: 75.485 bits (184), Expect = 7.702e-13 Identity = 44/156 (28.21%), Postives = 78/156 (50.00%), Query Frame = 1 Query: 379 DKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT-----IVSWTAMILGYAHIGSYAEALDVFRQM-QIVGIEPDEISIVPILPACAQLGSL 828 D ++ + +C L S GK IH + K L S +E+ L+D+Y KC L A VF+ M +++IV+WN++I+ G++K + LF +M + +++ +I H+G E + FR M + GI+P + ++ + G L Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRL 696
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.008e-18 Identity = 62/207 (29.95%), Postives = 93/207 (44.93%), Query Frame = 1 Query: 370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIE----PDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978 +LPD FT P VIK+C G+ +G +H V K GL D+ N L+S Y G + A LFD MP +VSW +MI ++ G E+ + +M + PD ++V +LP CA+ + LG+ +H + K L + V+ NAL++MY KCGC A +F ++V Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-------------------------------DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358 HSP 2 Score: 22.3274 bits (46), Expect = 1.008e-18 Identity = 7/15 (46.67%), Postives = 11/15 (73.33%), Query Frame = 3 Query: 960 DGKERCVSWSTMIGG 1004 + + VSW+TM+GG Sbjct: 353 NNNKNVVSWNTMVGG 367 HSP 3 Score: 94.3597 bits (233), Expect = 1.602e-18 Identity = 61/201 (30.35%), Postives = 97/201 (48.26%), Query Frame = 1 Query: 370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKR 972 +LPD FT+ ++ +C L LGK++H + + L +RD+ + +++S Y G++ + LFD M ++VSW +I GY G AL VFRQM + GI+ IS++P+ AC+ L SL LG H Y K L I +LI+MY K G Q+S++F+ + ++ Sbjct: 492 LLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL-------------------------------ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEK 661 HSP 4 Score: 78.1814 bits (191), Expect = 1.188e-13 Identity = 43/142 (30.28%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 538 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQM 963 + + + +E ++VA N ++ YA+ G + A+ +F + T+ SW A+I G+A +LD QM+I G+ PD ++ +L AC++L SL LG+ +H + + L R + +++ +YI CG LFD M Sbjct: 417 LHCYSLKQEFVYNELVA-NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 557 HSP 5 Score: 72.4034 bits (176), Expect = 6.520e-12 Identity = 50/196 (25.51%), Postives = 80/196 (40.82%), Query Frame = 1 Query: 373 LPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVG--IEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLF 954 +PD TL V+ C LGK +H K L + NAL+D+ Y++ G + A+M+F +VSW M+ G++ G DV RQM G ++ DE++I+ +P C L + +H Y K+ + ++ NA + Y KCG A ++F Sbjct: 289 MPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM-------------------------------YSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 453
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PPR80_ARATH (Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 1.227e-18 Identity = 66/220 (30.00%), Postives = 101/220 (45.91%), Query Frame = 1 Query: 388 TLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGS-------------------------------YAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLF 954 TL + K+C + G QIH V + L+ N+L+ +Y K + EA VF M ++D V+WN+LI+G + Q+ +A LF+KMP +VSWT MI G++ G Y EAL F +M + P+ + +L A A L L G IH K +++ + N+L+ MY KCG + A ++F Sbjct: 277 TLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496 HSP 2 Score: 84.3445 bits (207), Expect = 1.658e-15 Identity = 47/164 (28.66%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 487 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVG-IEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRD 975 S+ N LL Y + + EA +VF+ M +++V+ ++++ GY ++G++ AR LFD+M +++WTAMI GY G + + +F +M+ G ++ + ++ + AC G IH + L + N+L+ MY K G +A +F M +D Sbjct: 177 SVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340 The following BLAST results are available for this feature:
BLAST of DY262594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262594 ID=DY262594; Name=DY262594; organism=Citrus clementina; type=EST; length=1283bpback to top |