DY262594

Overview
NameDY262594
Unique NameDY262594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1283
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP319_ARATH (Pentatricopeptide repeat-containing protein At4g18520 OS=Arabidopsis thaliana GN=PCMP-A2 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.227e-18
Identity = 57/203 (28.08%), Postives = 97/203 (47.78%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            ++ +  T+  ++++C  +    LGK++HA + K  ++ +    + L+ LY KC E  +A  V ++                               +P   +VSWTAMI G + +G  +EALD  ++M   G+EP+  +    L ACA   SL +G  IH    K   L    + +ALI MY KCG   +A ++FD M ++++
Sbjct:  381 LIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQ-------------------------------LPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNL 552          

HSP 2 Score: 90.8929 bits (224), Expect = 1.772e-17
Identity = 57/214 (26.64%), Postives = 99/214 (46.26%), Query Frame = 1
Query:  373 LPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVFHGVP*LEACKS 1014
            LP++FT+  ++K+C        G+Q+H+ V K  +K+      +L+D+Y                               A+ G++   R +FD M     V+WT++I  +A  G   EA+ +FR M+   +  + +++V IL AC  +G+L LG+ +H    K S+ +   I + L+ +Y KCG    A  +  Q+  RDV      +  C S
Sbjct:  281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMY-------------------------------AKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463          

HSP 3 Score: 77.411 bits (189), Expect = 2.027e-13
Identity = 51/147 (34.69%), Postives = 72/147 (48.98%), Query Frame = 1
Query:  571 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIE-PDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVFHGVP*LEAC 1008
            D+ I   NNLIS   RLG +  AR +FD MP    V+WTAMI GY   G   EA  +F      GI   +E   V +L  C++    ELG  +H    K   +   ++ ++L+  Y +CG    A + FD M ++DV      + AC
Sbjct:  114 DQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISAC 259          

HSP 4 Score: 70.0922 bits (170), Expect = 3.236e-11
Identity = 37/133 (27.82%), Postives = 69/133 (51.88%), Query Frame = 1
Query:  577 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRD 975
            +++  ++L+  YA+ G++  A   FD M    ++SWTA+I   +  G   +A+ +F  M      P+E ++  IL AC++  +L  G  +H    K+ +     +  +L++MY KCG      ++FD M  R+
Sbjct:  217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRN 349          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP378_ARATH (Pentatricopeptide repeat-containing protein At5g13270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.733e-18
Identity = 61/200 (30.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  379 DKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            D F    V+K+C  L   +LGKQIHA V K GL+S       L+D Y KC     A + F+E+ + + V+W+ +ISGY ++ Q ++A   F      ++ S  A IL                         +  +   I  AC+ L    +G  +H    K+SL+      +ALI MY KCGC   A+++F+ M   D+
Sbjct:  284 DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTF-----KSLRSKNASIL-------------------------NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDI 453          

HSP 2 Score: 76.6406 bits (187), Expect = 3.457e-13
Identity = 56/208 (26.92%), Postives = 95/208 (45.67%), Query Frame = 1
Query:  355 RAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVI-----CNALIEMYIKCGCXHQASQLFDQM 963
            R+ +  + + FT   + ++C  L   ++G Q+HA   K  L      E+AL+ +Y KC  L +A++VFE M + DIVAW   ISG+A  G   +A  LF+KM     VS                           G++P+ ++ + +L AC+  G +E G+    +C    L +  V       + +I++Y + G   +A +    M
Sbjct:  378 RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM-----VS--------------------------CGMKPNSVTFIAVLTACSHAGLVEQGK----HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNM 550          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.733e-18
Identity = 60/195 (30.77%), Postives = 85/195 (43.59%), Query Frame = 1
Query:  379 DKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQM 963
            D FTL  V K+C  L   + GKQ+HA+  K G        + +LD+Y KC                               G M  A+  FD +P    V+WT MI G    G    A  VF QM+++G+ PDE +I  +  A + L +LE G  IH    K +      +  +L++MY KCG    A  LF ++
Sbjct:  516 DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC-------------------------------GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI 679          

HSP 2 Score: 79.7221 bits (195), Expect = 4.084e-14
Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 1
Query:  469 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAH-----IGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            FG   ++IT + L+   GKC         FEE  +R ++  NNLIS Y++ G +  AR +FDKMP   +VSW +++  YA      + +  +A  +FR ++   +    +++ P+L  C   G +   E  H Y  K  L     +  AL+ +Y+K G   +   LF++M  RDV
Sbjct:   43 FGFLRNAITSSDLM--LGKCTHA--RILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV 211          

HSP 3 Score: 75.0998 bits (183), Expect = 1.006e-12
Identity = 41/151 (27.15%), Postives = 74/151 (49.01%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLG 822
            +LPD+FT+  + K+   L     G+QIHA+  K    +      +L+D+Y KC  + +A+ +F+ +   +I AWN ++ G A+ G+ K                               E L +F+QM+ +GI+PD+++ + +L AC+  G
Sbjct:  614 VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGK-------------------------------ETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733          

HSP 4 Score: 71.2478 bits (173), Expect = 1.453e-11
Identity = 49/195 (25.13%), Postives = 90/195 (46.15%), Query Frame = 1
Query:  379 DKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQL-GSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQ 960
            D+ T   ++ + V +   +LG+Q+H    K GL                               D  +   N+LI+ Y +L +   AR +FD M    ++SW ++I G A  G   EA+ +F Q+   G++PD+ ++  +L A + L   L L + +H++  K + +  + +  ALI+ Y +  C  +A  LF++
Sbjct:  314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGL-------------------------------DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER 477          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP359_ARATH (Pentatricopeptide repeat-containing protein At4g39952, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 4.662e-18
Identity = 63/199 (31.66%), Postives = 92/199 (46.23%), Query Frame = 1
Query:  379 DKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRD 975
            D  +   VI SC  +    LGK +H +V K  L       N+L+DLYGK  +L  A ++F E  D +++ WN +I+ Y    Q +KA  LFD+M     VS                             +P  I++V +L AC   GSLE G+ IH Y  +        +  ALI+MY KCG   ++ +LFD   ++D
Sbjct:  432 DSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRM-----VS--------------------------ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKD 598          

HSP 2 Score: 68.9366 bits (167), Expect = 7.209e-11
Identity = 40/159 (25.16%), Postives = 78/159 (49.06%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGE 840
            P   TL  ++ +CV       G+ IH ++ +   + +     AL+D+Y KC  L ++ ++F+    +D V WN +ISGY   G ++ A  LFD+M  + +     ++ A++    H G   +   +F +M    ++P+      ++   ++ G+LE  E
Sbjct:  531 PSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAE 689          

HSP 3 Score: 68.5514 bits (166), Expect = 9.416e-11
Identity = 45/167 (26.95%), Postives = 83/167 (49.70%), Query Frame = 1
Query:  472 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR-----DIVAWNNLISGYARLGQMKKARMLFDKMPYT-TIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLF 954
            G+    +  + L++  GK   L+   K F     R     D    N+L+S Y +   +  A  LF ++       +W  M+ GY  +  + + +++FR++Q +GIE D  S   ++ +C+ +G++ LG+ +H Y  K SL     + N+LI++Y K G    A ++F
Sbjct:  326 GMHPDGVVISCLINELGKM-MLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF 491          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP232_ARATH (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.662e-18
Identity = 57/193 (29.53%), Postives = 91/193 (47.15%), Query Frame = 1
Query:  400 VIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            +++ C        G Q+H ++ K G   + IT N L+D+Y KC E + A+KV                               FD MP   +VSW+A++ G+   G    +L +F +M   GI P+E +    L AC  L +LE G  IH +C K        + N+L++MY KCG  ++A ++F ++V R +
Sbjct:   12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKV-------------------------------FDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSL 173          

HSP 2 Score: 92.0485 bits (227), Expect = 7.952e-18
Identity = 57/205 (27.80%), Postives = 95/205 (46.34%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIE--PDEISIVPILPACAQLGSLELGEWIHMYCDKKSL--LRRTVICNALIEMYIKCGCXHQASQLFDQMVKR 972
            I P++FT    +K+C  L     G QIH    K G +      N+L+D+Y KC                               G++ +A  +F ++   +++SW AMI G+ H G  ++ALD F  MQ   I+  PDE ++  +L AC+  G +  G+ IH +  +          I  +L+++Y+KCG    A + FDQ+ ++
Sbjct:  103 IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC-------------------------------GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEK 276          

HSP 3 Score: 88.5817 bits (218), Expect = 8.792e-17
Identity = 53/203 (26.11%), Postives = 97/203 (47.78%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLK--SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            PD+FTL  ++K+C        GKQIH  + + G    S +    +L+DLY KC  L  A K F+++ ++ +++W++LI GYA+ G+                               + EA+ +F+++Q +  + D  ++  I+   A    L  G+ +     K      T + N++++MY+KCG   +A + F +M  +DV
Sbjct:  208 PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE-------------------------------FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDV 379          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PPR55_ARATH (Pentatricopeptide repeat-containing protein At1g22830 OS=Arabidopsis thaliana GN=PCMP-E24 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 6.089e-18
Identity = 56/204 (27.45%), Postives = 105/204 (51.47%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT----TIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTV--ICNALIEMYIKCGCXHQASQLFDQM 963
            I  D+FT P VIK+C  LL  + G+ +H  +     + +    NAL+ +Y +  ++  A ++F+ M++RD V+WN +I+ Y    ++ +A  L D+M  +    +IV+W  +  G    G+Y  AL+    M+   +    ++++  L AC+ +G+L+ G+  H    +       +  + N+LI MY +C     A  +F Q+
Sbjct:  180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383          

HSP 2 Score: 76.6406 bits (187), Expect = 3.457e-13
Identity = 47/180 (26.11%), Postives = 90/180 (50.00%), Query Frame = 1
Query:  472 GLKSHSITENALLDLYGKCDELIEAHK----VFEEMTDRD-IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLR-RTVICNALIEMYIKCGCXHQASQLFDQMVKRDVFHGVP 993
            G   + IT  ++L L+ +   L    +    +    + +D ++ WN+L+  YA+ G++  A+ +FD M     V++T++I GY  +G    AL  F+ M   GI+PD +++V +L AC+    +  G W+    +    +R R    + ++++Y + G   +A         RD+FH +P
Sbjct:  418 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA---------RDIFHTIP 588          

HSP 3 Score: 75.8702 bits (185), Expect = 5.898e-13
Identity = 51/195 (26.15%), Postives = 100/195 (51.28%), Query Frame = 1
Query:  427 CPSLGKQIHAHVCKFGLKSHSITENALLDLYG--KCDEL--IEAHKVFEEMTDRDIV-------AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVIC-NALIEMYIKCGCXHQASQLFDQMVKRD 975
            C   G  I A  C  G+++ ++   ++  + G   C  +  ++  KVF  +  R            N+LI+ Y+R   ++ A ++F ++   ++ +W ++I G+A+     E   + ++M + G  P+ I++  ILP  A++G+L+ G+  H Y  ++   +  +I  N+L++MY K G    A ++FD M KRD
Sbjct:  295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRD 489          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.952e-18
Identity = 59/205 (28.78%), Postives = 95/205 (46.34%), Query Frame = 1
Query:  364 SLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            S+  PD FT  F +KSC  +       +IH  V + G           LD                     D +   +L+  Y+  G ++ A  +FD+MP   +VSW  MI  ++H+G + +AL ++++M   G+  D  ++V +L +CA + +L +G  +H             + NALI+MY KCG    A  +F+ M KRDV
Sbjct:  101 SVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGF----------LD---------------------DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDV 274          

HSP 2 Score: 73.559 bits (179), Expect = 2.927e-12
Identity = 41/141 (29.08%), Postives = 68/141 (48.23%), Query Frame = 1
Query:  343 LYNPRAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMILGYAHIGSYAEALDVFRQM 753
            +Y       +  D +TL  ++ SC  +   ++G  +H   C    +S     NAL+D+Y KC  L  A  VF  M  RD++ WN++I GY   G   +A   F KM  + +    +++  ++LG +H G   E ++ F  M
Sbjct:  195 MYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIM 335          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.039e-17
Identity = 57/202 (28.22%), Postives = 93/202 (46.04%), Query Frame = 1
Query:  358 AGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQM 963
            AG+L  PD   LP   KSC  L    +G+ +H    K G                                D D+   ++L+  YA+ G++  AR +FD+MP   +V+W+ M+ GYA +G   EAL +F++     +  ++ S   ++  CA    LELG  IH    K S    + + ++L+ +Y KCG    A Q+F+++
Sbjct:  109 AGNL-RPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGY-------------------------------DADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEV 278          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP363_ARATH (Pentatricopeptide repeat-containing protein At5g03800 OS=Arabidopsis thaliana GN=EMB175 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.039e-17
Identity = 50/194 (25.77%), Postives = 90/194 (46.39%), Query Frame = 1
Query:  379 DKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQ 960
            D FTL  ++ SC        G+++H    + GL       NAL+  Y K  ++ +   ++E M  +D V +  +I+ Y   G +  A  +F  +     +++ A++ G+   G   +AL +F  M   G+E  + S+   + AC  +   ++ E IH +C K        I  AL++M  +C     A ++FDQ
Sbjct:  284 DSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477          

HSP 2 Score: 77.7962 bits (190), Expect = 1.552e-13
Identity = 48/147 (32.65%), Postives = 79/147 (53.74%), Query Frame = 1
Query:  547 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVG-IEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIK--CGCXHQASQLFDQMVKRDV 978
            H  F ++ +      N LIS Y +LG  ++A ++F  +   T+VS+TA+I G++ +    EAL VF +M+  G ++P+E + V IL AC ++    LG  IH    K   L    + N+L+ +Y K          +LFD++ +RDV
Sbjct:  103 HASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDV 249          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP268_ARATH (Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.076e-17
Identity = 57/202 (28.22%), Postives = 87/202 (43.07%), Query Frame = 1
Query:  373 LPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            L D +T    +K+C GL     GK IH HV   G  +     N+L  +Y +C                               G+M+    LF+ M    +VSWT++I+ Y  IG   +A++ F +M+   + P+E +   +  ACA L  L  GE +H       L     + N++++MY  CG    AS LF  M  RD+
Sbjct:  206 LSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTEC-------------------------------GEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDI 376          

HSP 2 Score: 22.3274 bits (46), Expect = 1.076e-17
Identity = 11/28 (39.29%), Postives = 16/28 (57.14%), Query Frame = 3
Query:  978 VSWSTMIGG-LQIMQSSKTFIYFRMQKE 1058
            +SWST+IGG  Q     + F YF   ++
Sbjct:  377 ISWSTIIGGYCQAGFGEEGFKYFSWMRQ 404          

HSP 3 Score: 85.8853 bits (211), Expect = 5.699e-16
Identity = 56/203 (27.59%), Postives = 88/203 (43.35%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            + PD   L  V+K+C      + G+ +HA+  K  L S     ++LLD+Y                                R+G++ K+  +F +MP+   V+WTA+I G  H G Y E L  F +M       D  +    L ACA L  ++ G+ IH +   +  +    + N+L  MY +CG       LF+ M +RDV
Sbjct:  104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMY-------------------------------KRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275          

HSP 4 Score: 81.2629 bits (199), Expect = 1.404e-14
Identity = 43/130 (33.08%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  592 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIV--GIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRD 975
            N+ +      G ++ AR +FDKMP+  IVSWT++I  Y    +  EAL +F  M++V   + PD   +  +L AC Q  ++  GE +H Y  K SLL    + ++L++MY + G   ++ ++F +M  R+
Sbjct:   44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173          

HSP 5 Score: 80.4925 bits (197), Expect = 2.394e-14
Identity = 56/215 (26.05%), Postives = 96/215 (44.65%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELG-EWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMV-KRDVFHGVP*LEACKS 1014
            P  F L  ++     +     G+Q+HA    FGL+ +S   ++L+++Y KC                               G +K+A M+F +     IVS TAMI GYA  G   EA+D+F +   VG  PD ++ + +L AC   G L+LG  + +M  +  ++         ++++  + G    A ++ ++M  K+D       L ACK+
Sbjct:  409 PTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKC-------------------------------GSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKA 592          
The following BLAST results are available for this feature:
BLAST of DY262594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PP319_ARATH1.227e-1828.08Pentatricopeptide repeat-containing protein At4g18... [more]
PP378_ARATH2.733e-1830.50Pentatricopeptide repeat-containing protein At5g13... [more]
PP347_ARATH2.733e-1830.77Pentatricopeptide repeat-containing protein At4g33... [more]
PP359_ARATH4.662e-1831.66Pentatricopeptide repeat-containing protein At4g39... [more]
PP232_ARATH4.662e-1829.53Putative pentatricopeptide repeat-containing prote... [more]
PPR55_ARATH6.089e-1827.45Pentatricopeptide repeat-containing protein At1g22... [more]
PP284_ARATH7.952e-1828.78Pentatricopeptide repeat-containing protein At3g56... [more]
PP429_ARATH1.039e-1728.22Putative pentatricopeptide repeat-containing prote... [more]
PP363_ARATH1.039e-1725.77Pentatricopeptide repeat-containing protein At5g03... [more]
PP268_ARATH1.076e-1728.22Putative pentatricopeptide repeat-containing prote... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BF07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262594 ID=DY262594; Name=DY262594; organism=Citrus clementina; type=EST; length=1283bp
ACTAAACCTAAAAATGAATTAAAAAACAACAAAAAAATCGTGACCCTGCA
GCCCTCACTTTTCTATTCACTGCAGCCCTCACTCTCAATCCAGTTCACTG
CAGCTCCCTCTTTCCCCTCAATTTTCTCAATCCAGTTGCAGCAAATCTCT
CTCTTGGTCGCTCTTGGTGTGCTAGCCACTGCCGCTGCTCTTTCTCCGCC
GTAACCGCTGCTGCTCCGACTCTGTCCAGCTGCTGCTACTCGGACTCCGT
CCAGCTGCTGCTACTTCGTTTTTGCTCTCTTGGATCTGCACTTGCTCTCT
CGGATCTTCATCTACTGCTACTTCATTGTCACTTGCCGGTAATTATATAA
CCCACGAGCTGGAAGCCTAATTTTGCCTGATAAATTTACATTACCGTTTG
TGATTAAATCATGTGTGGGGCTGTTGTGTCCTTCCCTGGGAAAGCAAATT
CATGCCCATGTGTGTAAATTTGGGCTGAAGTCGCATTCCATAACAGAGAA
TGCACTTCTAGATTTGTATGGAAAATGTGATGAGCTAATTGAGGCACACA
AAGTGTTCGAGGAAATGACTGATAGAGATATAGTTGCTTGGAATAATCTT
ATTTCTGGGTATGCTAGATTGGGTCAAATGAAGAAAGCAAGAATGCTATT
TGATAAGATGCCTTATACGACTATTGTCTCATGGACTGCAATGATTTTGG
GGTATGCACATATAGGGAGCTATGCTGAAGCACTGGATGTATTTCGGCAA
ATGCAAATAGTGGGTATTGAACCTGATGAGATAAGTATCGTACCTATTTT
GCCAGCTTGTGCACAACTAGGATCTCTTGAGCTAGGGGAATGGATTCATA
TGTATTGTGATAAAAAATCACTGTTGCGGAGGACTGTTATTTGCAATGCT
CTCATCGAAATGTACATAAAATGTGGGTGCATNCATCAAGCAAGTCAGCT
GTTTGATCAGATGGTAAAGAGAGATGTGTTTCATGGAGTACCATGATTGG
AGGCTTGCAAATCATGCAAAGCTCAAAAACATTCATCTATTTCAGAATGC
AAAAAGAAATTGCACTTTTAAGGGCCAGAATACATCTAAAGGAAAAATTG
GAACAGTAATTTTTTAAAATAATTGGTTAAAACAGGGGGTGAAAAAAAAA
CCAAAATTAAAAAGGAAAAAAAAGGAAAAAGGTAAAATTTCTTTTTTAAA
AAAGTTAAATTTTAAAAATTTTTAAAATAAGGAAATTTTTTTTATAAAAA
AAAATTTTGGTTTAAAAAAAATTTTTTGTGTGT
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