DY262594

Overview
NameDY262594
Unique NameDY262594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1283
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 1.224e-26
Identity = 62/201 (30.85%), Postives = 111/201 (55.22%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT----TIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQ 960
            ++PD   LP + K C  L    +GKQIH   C  GL   +  + ++  +Y +C  + +A KVF+ M+D+D+V  + L+  YAR G +++   +  +M  +     IVSW  ++ G+   G + EA+ +F+++  +G  PD++++  +LP+      L +G  IH Y  K+ LL+   + +A+I+MY K G  +    LF+Q
Sbjct:  112 LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQ 312          

HSP 2 Score: 112.849 bits (281), Expect = 4.353e-24
Identity = 64/205 (31.22%), Postives = 111/205 (54.15%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT----IVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            PD+ T+  V+ S       ++G+ IH +V K GL       +A++D+YGK   +     +F +    +    N  I+G +R G + KA  +F+     T    +VSWT++I G A  G   EAL++FR+MQ+ G++P+ ++I  +LPAC  + +L  G   H +  +  LL    + +ALI+MY KCG  + +  +F+ M  +++
Sbjct:  250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.599e-26
Identity = 61/198 (30.81%), Postives = 102/198 (51.52%), Query Frame = 1
Query:  385 FTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            FT P V+K+C       LG  +H+ V K G                                + D+ A  +L+S Y+  G++  A  LFD++P  ++V+WTA+  GY   G + EA+D+F++M  +G++PD   IV +L AC  +G L+ GEWI  Y ++  + + + +   L+ +Y KCG   +A  +FD MV++D+
Sbjct:  112 FTFPLVLKACTRASSRKLGIDLHSLVVKCGF-------------------------------NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDI 278          

HSP 2 Score: 107.842 bits (268), Expect = 1.400e-22
Identity = 56/144 (38.89%), Postives = 85/144 (59.03%), Query Frame = 1
Query:  550 KVFEEMT-DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            K  EEM   ++      L++ YA+ G+M+KAR +FD M    IV+W+ MI GYA      E +++F QM    ++PD+ SIV  L +CA LG+L+LGEW     D+   L    + NALI+MY KCG   +  ++F +M ++D+
Sbjct:  236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP182_ARATH (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana GN=PCMP-H6 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.599e-26
Identity = 68/215 (31.63%), Postives = 101/215 (46.98%), Query Frame = 1
Query:  334 CR*LYNPRAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            C   Y     S + P  +T   VIKSC  L    +GK +H H    G    +  + AL+  Y KC                               G M+ AR +FD+MP  +IV+W +++ G+   G   EA+ VF QM+  G EPD  + V +L ACAQ G++ LG W+H Y   + L     +  ALI +Y +CG   +A ++FD+M + +V
Sbjct:   91 CVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKC-------------------------------GDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274          

HSP 2 Score: 71.633 bits (174), Expect = 1.112e-11
Identity = 39/131 (29.77%), Postives = 69/131 (52.67%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM-----PYTTIVSWTAMILGYAHIGSYAEALDVFRQM 753
            PD  T   ++ +C      SLG  +H ++   GL  +     AL++LY +C ++ +A +VF++M + ++ AW  +IS Y   G  ++A  LF+KM     P    V++ A++   AH G   E   V+++M
Sbjct:  206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRM 336          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.727e-26
Identity = 63/203 (31.03%), Postives = 102/203 (50.25%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            + PD +T P V+++C G+   + GK++H HV ++G +      NAL+ +Y KC                               G +K AR+LFD+MP   I+SW AMI GY   G   E L++F  M+ + ++PD +++  ++ AC  LG   LG  IH Y           +CN+L +MY+  G   +A +LF +M ++D+
Sbjct:  192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC-------------------------------GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363          

HSP 2 Score: 103.219 bits (256), Expect = 3.449e-21
Identity = 66/212 (31.13%), Postives = 95/212 (44.81%), Query Frame = 1
Query:  343 LYNPRAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            L+    G  + PD  TL  VI +C  L    LG+ IHA+V   G                                  DI   N+L   Y   G  ++A  LF +M    IVSWT MI GY +     +A+D +R M    ++PDEI++  +L ACA LG L+ G  +H    K  L+   ++ N LI MY KC C  +A  +F  + +++V
Sbjct:  284 LFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV-------------------------------DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNV 464          

HSP 3 Score: 77.0258 bits (188), Expect = 2.647e-13
Identity = 44/151 (29.14%), Postives = 76/151 (50.33%), Query Frame = 1
Query:  541 EAHKVFE----EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVF-RQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            E  KV+      M+   +   N  ++ + R G +  A  +F KM    + SW  ++ GYA  G + EA+ ++ R + + G++PD  +   +L  C  +  L  G+ +H++  +        + NALI MY+KCG    A  LFD+M +RD+
Sbjct:  112 EGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI 262          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP297_ARATH (Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 3.561e-26
Identity = 66/184 (35.87%), Postives = 107/184 (58.15%), Query Frame = 1
Query:  439 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT----TIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            G+QIH +V + GL+S+    N+L+ +Y +  +L  + KVF  M DR++ +WN+++S Y +LG +  A  L D+M        IV+W +++ GYA  G   +A+ V ++MQI G++P   SI  +L A A+ G L+LG+ IH Y  +  L     +   LI+MYIK G    A  +FD M  +++
Sbjct:  108 GRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNI 291          

HSP 2 Score: 90.8929 bits (224), Expect = 1.772e-17
Identity = 63/212 (29.72%), Postives = 98/212 (46.23%), Query Frame = 1
Query:  436 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI-----------------------------------SGYARLGQMKKARMLFDKMP----YTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLF 954
            LGK IH ++ +  L      E  L+D+Y K   L  A  VF+ M  ++IVAWN+L+                                   SGYA LG+ +KA  +  KM        +VSWTA+  G +  G++  AL VF +MQ  G+ P+  ++  +L     L  L  G+ +H +C +K+L+    +  AL++MY K G    A ++F
Sbjct:  243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF 454          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.561e-26
Identity = 81/284 (28.52%), Postives = 122/284 (42.96%), Query Frame = 1
Query:  343 LYNPRAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL---------------------------------IEAHKVFEEMTDRDIVA-WNNLISG--------------------------------------YARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            +Y+    + + PD FT P ++K+C GL    +G+ +HA V + G  +    +N L+ LY KC  L                                 +EA ++F +M   D+   W  L+S                                       YA+ GQ+  A++LFDKM    ++ W AMI GYA  G   EA+D+F +M    + PD ISI   + ACAQ+GSLE    ++ Y  +        I +ALI+M+ KCG    A  +FD+ + RDV
Sbjct:  106 MYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV 389          

HSP 2 Score: 69.707 bits (169), Expect = 4.226e-11
Identity = 39/132 (29.55%), Postives = 62/132 (46.97%), Query Frame = 1
Query:  598 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVFHGVP 993
            LI   +  G +  AR +FD +P   I  W A+I GY+    + +AL ++  MQ+  + PD  +   +L AC+ L  L++G ++H    +        + N LI +Y KC     A         R VF G+P
Sbjct:   59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSA---------RTVFEGLP 181          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP370_ARATH (Putative pentatricopeptide repeat-containing protein At5g08490 OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.036e-25
Identity = 71/205 (34.63%), Postives = 112/205 (54.63%), Query Frame = 1
Query:  379 DKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITE----NALLDLYGKCDELIEAHKVFEEMTDR-DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            D  T+  ++K C+ +      K++H +  K GL  H   E    NALLD Y KC  +  AHK+F  +++R  +V++N+L+SGY   G    A+MLF +M  T + +W+ M+  YA      EA+ VFR++Q  G+ P+ ++I+ +LP CAQL SL L    H Y  +   L    +   L+++Y KCG    A  +F    +RD+
Sbjct:  431 DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLL-HDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG-LGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDL 633          

HSP 2 Score: 84.7297 bits (208), Expect = 1.270e-15
Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = 1
Query:  538 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVG-IEPDEISIVPILPACAQLGSLELGEWIHMYCDKKS-LLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            I ++ V        +   N+L+S Y R+G++++A  LF +M    +VSW  +I GYA    + +A  +F  +   G + PD ++I+ ILP CAQL  L  G+ IH Y  + S LL  T + NALI  Y + G    A   F  M  +D+
Sbjct:  249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI 397          

HSP 3 Score: 80.8777 bits (198), Expect = 1.833e-14
Identity = 55/206 (26.70%), Postives = 94/206 (45.63%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI-EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLG---SLELGEWIHMYCDKKSLLRRTV-ICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            P   T   V+  CV L     GK +H+++ K GL+  ++  NAL+ +Y K   +  +A+  F+ + D+D                               +VSW A+I G++     A+A   F  M     EP+  +I  +LP CA +    +   G  IH Y  ++S L+  V +CN+L+  Y++ G   +A+ LF +M  +D+
Sbjct:  120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD-------------------------------VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDL 294          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP260_ARATH (Pentatricopeptide repeat-containing protein At3g28660 OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.353e-25
Identity = 69/206 (33.50%), Postives = 105/206 (50.97%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTV-ICNALIEMYIKCGCXHQASQLFDQMVKRDVF 981
            I P   T  F+I +C+     S+GKQIH  V K G+  S    +  +L +Y +   L +A KVF+E                               +P   +V W  ++ GY   G  +E L+VF++M + GIEPDE S+   L ACAQ+G+L  G+WIH +  KK  +   V +  AL++MY KCGC   A ++F+++ +R+VF
Sbjct:  112 ITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDE-------------------------------IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVF 286          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP403_ARATH (Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.767e-25
Identity = 62/161 (38.51%), Postives = 100/161 (62.11%), Query Frame = 1
Query:  499 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKK-SLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            NAL+D   K  +L+ A K+F+EM  RDI+++ ++I GYA+ G M  AR LF++     + +W+A+ILGYA  G   EA  VF +M    ++PDE  +V ++ AC+Q+G  EL E +  Y  ++ +      +  ALI+M  KCG   +A++LF++M +RD+
Sbjct:  211 NALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDL 371          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP308_ARATH (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 1.767e-25
Identity = 65/208 (31.25%), Postives = 107/208 (51.44%), Query Frame = 1
Query:  358 AGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIE-PDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            + S + PD F    ++K+C  L     G+Q+H H       +  + +++L+D+Y KC  L  A  VF+ +  ++ ++W  ++SGYA+ G+ ++A  LF  +P   + SWTA+I G+   G   EA  VF +M+   ++  D + +  I+ ACA L +   G  +H             I NALI+MY KC     A  +F +M  RDV
Sbjct:   97 SSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDV 304          

HSP 2 Score: 85.5001 bits (210), Expect = 7.443e-16
Identity = 49/159 (30.82%), Postives = 79/159 (49.69%), Query Frame = 1
Query:  379 DKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMILGYAHIGSYAEALDVFRQM-QIVGIEPDEISIVPILPACAQLGSLELGE 840
            D   L  ++ +C  L     G+Q+H  V   G  S     NAL+D+Y KC ++I A  +F  M  RD+V+W +LI G A+ GQ +KA  L+D M    +    V++  +I   +H+G   +  ++F+ M +  GI P       +L    + G L+  E
Sbjct:  237 DPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAE 395          
The following BLAST results are available for this feature:
BLAST of DY262594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PPR53_ARATH1.224e-2630.85Pentatricopeptide repeat-containing protein At1g20... [more]
PP219_ARATH1.599e-2630.81Putative pentatricopeptide repeat-containing prote... [more]
PP182_ARATH1.599e-2631.63Pentatricopeptide repeat-containing protein At2g33... [more]
PPR45_ARATH2.727e-2631.03Pentatricopeptide repeat-containing protein At1g15... [more]
PP297_ARATH3.561e-2635.87Pentatricopeptide repeat-containing protein At4g01... [more]
PP224_ARATH3.561e-2628.52Pentatricopeptide repeat-containing protein At3g12... [more]
PP370_ARATH1.036e-2534.63Putative pentatricopeptide repeat-containing prote... [more]
PP260_ARATH1.353e-2533.50Pentatricopeptide repeat-containing protein At3g28... [more]
PP403_ARATH1.767e-2538.51Putative pentatricopeptide repeat-containing prote... [more]
PP308_ARATH1.767e-2531.25Pentatricopeptide repeat-containing protein At4g14... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BF07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262594 ID=DY262594; Name=DY262594; organism=Citrus clementina; type=EST; length=1283bp
ACTAAACCTAAAAATGAATTAAAAAACAACAAAAAAATCGTGACCCTGCA
GCCCTCACTTTTCTATTCACTGCAGCCCTCACTCTCAATCCAGTTCACTG
CAGCTCCCTCTTTCCCCTCAATTTTCTCAATCCAGTTGCAGCAAATCTCT
CTCTTGGTCGCTCTTGGTGTGCTAGCCACTGCCGCTGCTCTTTCTCCGCC
GTAACCGCTGCTGCTCCGACTCTGTCCAGCTGCTGCTACTCGGACTCCGT
CCAGCTGCTGCTACTTCGTTTTTGCTCTCTTGGATCTGCACTTGCTCTCT
CGGATCTTCATCTACTGCTACTTCATTGTCACTTGCCGGTAATTATATAA
CCCACGAGCTGGAAGCCTAATTTTGCCTGATAAATTTACATTACCGTTTG
TGATTAAATCATGTGTGGGGCTGTTGTGTCCTTCCCTGGGAAAGCAAATT
CATGCCCATGTGTGTAAATTTGGGCTGAAGTCGCATTCCATAACAGAGAA
TGCACTTCTAGATTTGTATGGAAAATGTGATGAGCTAATTGAGGCACACA
AAGTGTTCGAGGAAATGACTGATAGAGATATAGTTGCTTGGAATAATCTT
ATTTCTGGGTATGCTAGATTGGGTCAAATGAAGAAAGCAAGAATGCTATT
TGATAAGATGCCTTATACGACTATTGTCTCATGGACTGCAATGATTTTGG
GGTATGCACATATAGGGAGCTATGCTGAAGCACTGGATGTATTTCGGCAA
ATGCAAATAGTGGGTATTGAACCTGATGAGATAAGTATCGTACCTATTTT
GCCAGCTTGTGCACAACTAGGATCTCTTGAGCTAGGGGAATGGATTCATA
TGTATTGTGATAAAAAATCACTGTTGCGGAGGACTGTTATTTGCAATGCT
CTCATCGAAATGTACATAAAATGTGGGTGCATNCATCAAGCAAGTCAGCT
GTTTGATCAGATGGTAAAGAGAGATGTGTTTCATGGAGTACCATGATTGG
AGGCTTGCAAATCATGCAAAGCTCAAAAACATTCATCTATTTCAGAATGC
AAAAAGAAATTGCACTTTTAAGGGCCAGAATACATCTAAAGGAAAAATTG
GAACAGTAATTTTTTAAAATAATTGGTTAAAACAGGGGGTGAAAAAAAAA
CCAAAATTAAAAAGGAAAAAAAAGGAAAAAGGTAAAATTTCTTTTTTAAA
AAAGTTAAATTTTAAAAATTTTTAAAATAAGGAAATTTTTTTTATAAAAA
AAAATTTTGGTTTAAAAAAAATTTTTTGTGTGT
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