DY262594

Overview
NameDY262594
Unique NameDY262594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1283
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 9.698e-24
Identity = 61/165 (36.97%), Postives = 95/165 (57.58%), Query Frame = 1
Query:  484 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            + ++ NA+L  Y + + +  A ++F+ M  R++  WN +I+GYA+ G++ +A+ LFDKMP    VSW AMI GY+  G   EAL +F QM+  G   +  S    L  CA + +LELG+ +H    K        + NAL+ MY KCG   +A+ LF +M  +D+
Sbjct:  311 NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475          

HSP 2 Score: 94.7449 bits (234), Expect = 1.227e-18
Identity = 56/164 (34.15%), Postives = 90/164 (54.88%), Query Frame = 1
Query:  490 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIH--MYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRD 975
            ++ N LL  + K  +++EA + F+ M  RD+V+WN +I+GYA+ G++ +AR LFD+ P   + +WTAM+ GY       EA ++F +M     E +E+S   +L    Q   +E+ + +   M C      R     N +I  Y +CG   +A  LFD+M KRD
Sbjct:  220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPC------RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373          

HSP 3 Score: 83.5741 bits (205), Expect = 2.828e-15
Identity = 60/192 (31.25%), Postives = 91/192 (47.40%), Query Frame = 1
Query:  487 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLE-------------LGEW---IHMYCDKKSL-----------LRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVF 981
            S++ N ++  Y +  E   A K+F+EM +RD+V+WN +I GY R   + KAR LF+ MP   + SW  M+ GYA  G   +A  VF +M     E +++S   +L A  Q   +E             L  W   +  +  KK +           +R  V  N +I  Y + G   +A QLFD+   +DVF
Sbjct:   95 SVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282          

HSP 4 Score: 78.1814 bits (191), Expect = 1.188e-13
Identity = 48/188 (25.53%), Postives = 89/188 (47.34%), Query Frame = 1
Query:  403 IKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELG-EWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQM 963
            + +C  ++   LGKQ+H  + K G ++     NALL +Y KC  + EA+ +F+EM  +DIV+WN +I+GY+R G        F ++                       AL  F  M+  G++PD+ ++V +L AC+  G ++ G ++ +       ++  +     ++++  + G    A  L   M
Sbjct:  416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG--------FGEV-----------------------ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP245_ARATH (Pentatricopeptide repeat-containing protein At3g21470 OS=Arabidopsis thaliana GN=PCMP-E29 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 9.698e-24
Identity = 54/160 (33.75%), Postives = 93/160 (58.13%), Query Frame = 1
Query:  499 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            + +L +Y    ++ +A K FE++ +++   W+ ++SGY R+G + +AR +F ++    +V W  +I GYA  G   +A+D F  MQ  G EPD +++  IL ACAQ G L++G  +H   + + +     + NALI+MY KCG    A+ +F+ +  R V
Sbjct:  181 SVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSV 340          

HSP 2 Score: 78.9518 bits (193), Expect = 6.967e-14
Identity = 54/205 (26.34%), Postives = 102/205 (49.76%), Query Frame = 1
Query:  391 LPFVIKSCVGLLCPS-LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY-TTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIH--MYCDKKSLL-----RRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            +P ++++C  ++    LGK +H+   KFG+ S  +  ++L+ +YGKC  ++ A KVF+EM +R++  WN +I GY   G    A  LF+++      V+W  MI GY       +A ++F +M      P E+  V       +  S+ LG +++     D +        +   + + ++  Y + G  H+A  +F ++  RD+
Sbjct:   48 VPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM------PFELKNV-------KAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDL 239          

HSP 3 Score: 69.707 bits (169), Expect = 4.226e-11
Identity = 37/138 (26.81%), Postives = 73/138 (52.90%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPD 777
            PD  T+  ++ +C       +G+++H+ +   G++ +    NAL+D+Y KC +L  A  VFE ++ R +   N++IS  A  G+ K+A  +F  M    +    +++ A++    H G   E L +F +M+   ++P+
Sbjct:  272 PDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPN 409          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP276_ARATH (Pentatricopeptide repeat-containing protein At3g49740 OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.267e-23
Identity = 62/196 (31.63%), Postives = 99/196 (50.51%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS-WTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQ 960
            PD++++   I +   L     G Q+H +  + GL  HS   N LL LY +   L    K F+E+ + D+ +W  L+S   +LG ++ A  +FDKMP    V+ W AMI G    G +  ++++FR+M  +G+  D+     IL  C   GSL+ G+ +H    K      + + NALI MY  C     A  +F++
Sbjct:   55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEE 249          

HSP 2 Score: 87.4261 bits (215), Expect = 1.959e-16
Identity = 60/192 (31.25%), Postives = 101/192 (52.60%), Query Frame = 1
Query:  415 VGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD--ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQM--QIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            +G    S+ K++H      G+K    T  +LL      D  E+++A  +   ++ +  ++ N LIS Y++ GQ++KA +LF++     ++SW A+I G+ H G   E L+ F  +    V I PD  ++  +L  C    SL LG   H Y  +    + T+I NALI MY +CG    + ++F+QM ++DV
Sbjct:  369 LGKSAMSVYKRMHI----IGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEIS-NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDV 555          

HSP 3 Score: 83.9593 bits (206), Expect = 2.166e-15
Identity = 42/133 (31.58%), Postives = 75/133 (56.39%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP-----YTTIVSWTAMILGYAHIGSYAEALDVFRQM 753
            ILPD +TL  ++  CV      LG Q HA+V + G    ++  NAL+++Y +C  +  + +VF +M+++D+V+WN+LIS Y+R G+ + A   +  M           +++A++   +H G   E L++F  M
Sbjct:  485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSM 617          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP423_ARATH (Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis thaliana GN=PCMP-E103 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.654e-23
Identity = 67/235 (28.51%), Postives = 112/235 (47.66%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP------YTTIV-------------------------SWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            + P++F+    + +C  L    LG  IH+ + K GL K + +  N L+D+YGKC  + +A  VF+ M ++D V+WN +++  +R G+++     F +MP      Y  ++                         SW  ++ GY +     EA + F +M   G+  DE S+  +L A A L  +  G  IH    K  L  R V+ +ALI+MY KCG    A  +F  M ++++
Sbjct:  152 VFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNL 386          

HSP 2 Score: 93.9745 bits (232), Expect = 2.093e-18
Identity = 58/182 (31.87%), Postives = 88/182 (48.35%), Query Frame = 1
Query:  433 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLR-RTVICNALIEMYIKCGCXHQASQLFDQMVKRD 975
            SL +Q+H +V K G  S++   N+L+  Y   D L +AHKVF+EM D D+++WN+L+SGY + G+                               + E + +F ++    + P+E S    L ACA+L    LG  IH    K  L +   V+ N LI+MY KCG    A  +F  M ++D
Sbjct:   72 SLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR-------------------------------FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKD 222          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.654e-23
Identity = 62/210 (29.52%), Postives = 103/210 (49.05%), Query Frame = 1
Query:  346 YNPRAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRD 975
            Y     S + PDK+T P VIK+C GL    +G  ++  +   G +S     NAL+D+                               Y+R+G + +AR +FD+MP   +VSW ++I GY+  G Y EAL+++ +++   I PD  ++  +LPA   L  ++ G+ +H +  K  +    V+ N L+ MY+K      A ++FD+M  RD
Sbjct:   94 YGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDM-------------------------------YSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRD 272          

HSP 2 Score: 94.7449 bits (234), Expect = 1.227e-18
Identity = 74/271 (27.31%), Postives = 108/271 (39.85%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE-------------------------------LIEAHKVF------EEMTDR---------------------------------DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            PD  T+  V+++C  L   SL K I+ ++ K G    S   N L+D+Y KC +                               L+EA K+F      EE  D                                  D+   N LI  YA+ G++  +  +F  M     V+W  +I      G +A  L V  QM+   + PD  + +  LP CA L +  LG+ IH    +        I NALIEMY KCGC   +S++F++M +RDV
Sbjct:  305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV 575          

HSP 3 Score: 90.5077 bits (223), Expect = 2.314e-17
Identity = 59/211 (27.96%), Postives = 99/211 (46.92%), Query Frame = 1
Query:  343 LYNPRAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRD 975
            +Y+    S I+PD FT+  V+ +   LL    G+ +H    K G+ S  +  N L+ +Y K     +A +VF+EM  RD V++N +I GY +L  ++++  +F                         E LD F+        PD +++  +L AC  L  L L ++I+ Y  K   +  + + N LI++Y KCG    A  +F+ M  +D
Sbjct:  194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF------------------------LENLDQFK--------PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372          

HSP 4 Score: 80.4925 bits (197), Expect = 2.394e-14
Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = 1
Query:  364 SLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS----WTAMILGYAHIGSYAEALDVFRQMQ 756
            S ++PD  T    +  C  L    LGK+IH  + +FG +S     NAL+++Y KC  L  + +VFE M+ RD+V W  +I  Y   G+ +KA   F  M  + IV     + A+I   +H G   E L  F +M+
Sbjct:  503 SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.161e-23
Identity = 61/212 (28.77%), Postives = 108/212 (50.94%), Query Frame = 1
Query:  343 LYNPRAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDV 978
            L+     S ++PD+  L  ++ +C         + I+  + +  ++  +    AL+ +Y     +  A + F +M+ R++     ++SGY++ G++  A+++FD+     +V WT MI  Y       EAL VF +M   GI+PD +S+  ++ ACA LG L+  +W+H       L     I NALI MY KCG       +F++M +R+V
Sbjct:  199 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410          

HSP 2 Score: 80.8777 bits (198), Expect = 1.833e-14
Identity = 48/201 (23.88%), Postives = 86/201 (42.79%), Query Frame = 1
Query:  379 DKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVF 981
            D+F+   ++K+   +     G ++H    K         E   +D+Y  C  +  A  VF+EM+ RD+V WN +I  Y R G + +A  LF++M  + ++                               PDE+ +  I+ AC + G++     I+ +  +  +   T +  AL+ MY   GC   A + F +M  R++F
Sbjct:  110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM-------------------------------PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLF 279          

HSP 3 Score: 70.0922 bits (170), Expect = 3.236e-11
Identity = 44/148 (29.73%), Postives = 73/148 (49.32%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPIL 801
            I PD  ++  VI +C  L      K +H+ +   GL+S     NAL+++Y KC  L     VFE+M  R++V+W+++I+  +  G+   A  LF +M    +    V++  ++ G +H G   E   +F  M       DE +I P L
Sbjct:  340 IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM------TDEYNITPKL 481          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PPR62_ARATH (Pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E34 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 2.822e-23
Identity = 64/207 (30.92%), Postives = 113/207 (54.59%), Query Frame = 1
Query:  379 DKFTLPFVIKSCVG-----LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAE-ALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVF 981
            D +TL  V+K+        +L  SL + +HA + K  ++   +   AL+D Y K  +L  A  VFE M D ++V   ++ISGY   G ++ A  +F+      IV + AM+ G++  G  A+ ++D++  MQ  G  P+  +   ++ AC+ L S E+G+ +H    K  +     + ++L++MY KCG  + A ++FDQM +++VF
Sbjct:  134 DGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVF 340          

HSP 2 Score: 77.7962 bits (190), Expect = 1.552e-13
Identity = 39/131 (29.77%), Postives = 73/131 (55.73%), Query Frame = 1
Query:  376 PDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMILGYAHIGSYAEALDVFRQMQ 756
            P+  T   VI +C  L    +G+Q+HA + K G+ +H    ++LLD+Y KC  + +A +VF++M ++++ +W ++I GY + G  ++A  LF +M    I    V++   +   +H G   +  ++F  MQ
Sbjct:  271 PNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ 401          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP337_ARATH (Pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E53 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.822e-23
Identity = 70/211 (33.18%), Postives = 105/211 (49.76%), Query Frame = 1
Query:  343 LYNPRAGSLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRD 975
            LY   A   + PD+FT P V+K+C G+    +G+ IH  + K G                                  D+   N L+  YA+ G + KAR +FD +P+   VSW +M+ GY H G   EALD+FR M   GIEPD+++I  +L   A++ S + G  +H +  ++ +     + NALI +Y K G   QA  +FDQM++RD
Sbjct:  182 LYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGF-------------------------------GYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERD 358          

HSP 2 Score: 88.5817 bits (218), Expect = 8.792e-17
Identity = 55/204 (26.96%), Postives = 97/204 (47.55%), Query Frame = 1
Query:  364 SLILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRD 975
            SL  P+ F    ++++C  L     G ++H  +  + L+++    + L+ LY  C     AH+VF+ M+ RD                             ++  +W ++I GYA +G Y +A+ ++ QM   G++PD  +   +L AC  +GS+++GE IH    K+       + NAL+ MY KCG   +A  +FD +  +D
Sbjct:   88 SLTEPEIFAS--LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRD-----------------------------SSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKD 260          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP436_ARATH (Pentatricopeptide repeat-containing protein At5g59600 OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.685e-23
Identity = 71/237 (29.96%), Postives = 110/237 (46.41%), Query Frame = 1
Query:  379 DKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY---------------------------------------TTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKR 972
            D F +P ++K+   LL    GK IH  V KF  +S +   ++L+D+Y K  E+  A KVF ++ ++D+V +N +ISGYA   Q  +A  L   M                                           +VSWT++I G  H     +A D F+QM   G+ P+  +I+ +LPAC  L  ++ G+ IH Y     L     + +AL++MY KCG   +A  LF +  K+
Sbjct:  116 DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK 352          

HSP 2 Score: 71.2478 bits (173), Expect = 1.453e-11
Identity = 54/217 (24.88%), Postives = 96/217 (44.24%), Query Frame = 1
Query:  370 ILPDKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKK-SLLRRTVICNALIEMYIKCGCXHQASQLFDQM-VKRDVFHGVP*LEACKS 1014
            + P+  T+  ++ +C  L     GK+IH +    GL+ H    +ALLD+YGKC  + EA  +F +   +  V +N++I  YA  G   KA  LFD                               QM+  G + D ++   IL AC+  G  +LG+ + +    K  ++ R      ++++  + G   +A ++   M ++ D+F     L AC++
Sbjct:  284 LYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFD-------------------------------QMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRN 469          
BLAST of DY262594 vs. ExPASy Swiss-Prot
Match: PP202_ARATH (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 4.813e-23
Identity = 58/166 (34.94%), Postives = 97/166 (58.43%), Query Frame = 1
Query:  490 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVG-IEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLLRRTVICNALIEMYIKCGCXHQASQLFDQMVKRDVFH 984
            I+ N+++D Y K   + +A  +F+ M  RD+V W  +I GYA+LG +  A+ LFD+MP+  +V++ +M+ GY     + EAL++F  M+    + PD+ ++V +LPA AQLG L     +H+Y  +K       +  ALI+MY KCG    A  +F+ +  + + H
Sbjct:  253 ISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH 418          

HSP 2 Score: 104.76 bits (260), Expect = 1.186e-21
Identity = 75/207 (36.23%), Postives = 107/207 (51.69%), Query Frame = 1
Query:  379 DKFTLPFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP--YTTIVSWTAMILGYAHIGSYAEALDVFRQMQIVGIEPDEISIVPILPACAQLGSLELGEWIHMYCDKKSLL----RRTVICNA-LIEMYIKCGCXHQASQLFDQMVKRDV 978
            DKF+L  V+K+C  L     G QIH  + K GL S    +N L+ LY KC  L  + ++F+ M  RD V++N++I GY + G +  AR LFD MP     ++SW +MI GYA     ++ +D+  ++     E D IS   ++    + G +E         D K L     RR V+  A +I+ Y K G  H A  LFDQM  RDV
Sbjct:  120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQT---SDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIE---------DAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV 314          
The following BLAST results are available for this feature:
BLAST of DY262594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PP301_ARATH9.698e-2436.97Pentatricopeptide repeat-containing protein At4g02... [more]
PP245_ARATH9.698e-2433.75Pentatricopeptide repeat-containing protein At3g21... [more]
PP276_ARATH1.267e-2331.63Pentatricopeptide repeat-containing protein At3g49... [more]
PP423_ARATH1.654e-2328.51Putative pentatricopeptide repeat-containing prote... [more]
PP210_ARATH1.654e-2329.52Pentatricopeptide repeat-containing protein At3g03... [more]
PP311_ARATH2.161e-2328.77Pentatricopeptide repeat-containing protein At4g14... [more]
PPR62_ARATH2.822e-2330.92Pentatricopeptide repeat-containing protein At1g28... [more]
PP337_ARATH2.822e-2333.18Pentatricopeptide repeat-containing protein At4g25... [more]
PP436_ARATH3.685e-2329.96Pentatricopeptide repeat-containing protein At5g59... [more]
PP202_ARATH4.813e-2334.94Pentatricopeptide repeat-containing protein At2g45... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BF07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262594 ID=DY262594; Name=DY262594; organism=Citrus clementina; type=EST; length=1283bp
ACTAAACCTAAAAATGAATTAAAAAACAACAAAAAAATCGTGACCCTGCA
GCCCTCACTTTTCTATTCACTGCAGCCCTCACTCTCAATCCAGTTCACTG
CAGCTCCCTCTTTCCCCTCAATTTTCTCAATCCAGTTGCAGCAAATCTCT
CTCTTGGTCGCTCTTGGTGTGCTAGCCACTGCCGCTGCTCTTTCTCCGCC
GTAACCGCTGCTGCTCCGACTCTGTCCAGCTGCTGCTACTCGGACTCCGT
CCAGCTGCTGCTACTTCGTTTTTGCTCTCTTGGATCTGCACTTGCTCTCT
CGGATCTTCATCTACTGCTACTTCATTGTCACTTGCCGGTAATTATATAA
CCCACGAGCTGGAAGCCTAATTTTGCCTGATAAATTTACATTACCGTTTG
TGATTAAATCATGTGTGGGGCTGTTGTGTCCTTCCCTGGGAAAGCAAATT
CATGCCCATGTGTGTAAATTTGGGCTGAAGTCGCATTCCATAACAGAGAA
TGCACTTCTAGATTTGTATGGAAAATGTGATGAGCTAATTGAGGCACACA
AAGTGTTCGAGGAAATGACTGATAGAGATATAGTTGCTTGGAATAATCTT
ATTTCTGGGTATGCTAGATTGGGTCAAATGAAGAAAGCAAGAATGCTATT
TGATAAGATGCCTTATACGACTATTGTCTCATGGACTGCAATGATTTTGG
GGTATGCACATATAGGGAGCTATGCTGAAGCACTGGATGTATTTCGGCAA
ATGCAAATAGTGGGTATTGAACCTGATGAGATAAGTATCGTACCTATTTT
GCCAGCTTGTGCACAACTAGGATCTCTTGAGCTAGGGGAATGGATTCATA
TGTATTGTGATAAAAAATCACTGTTGCGGAGGACTGTTATTTGCAATGCT
CTCATCGAAATGTACATAAAATGTGGGTGCATNCATCAAGCAAGTCAGCT
GTTTGATCAGATGGTAAAGAGAGATGTGTTTCATGGAGTACCATGATTGG
AGGCTTGCAAATCATGCAAAGCTCAAAAACATTCATCTATTTCAGAATGC
AAAAAGAAATTGCACTTTTAAGGGCCAGAATACATCTAAAGGAAAAATTG
GAACAGTAATTTTTTAAAATAATTGGTTAAAACAGGGGGTGAAAAAAAAA
CCAAAATTAAAAAGGAAAAAAAAGGAAAAAGGTAAAATTTCTTTTTTAAA
AAAGTTAAATTTTAAAAATTTTTAAAATAAGGAAATTTTTTTTATAAAAA
AAAATTTTGGTTTAAAAAAAATTTTTTGTGTGT
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