DY262596

Overview
NameDY262596
Unique NameDY262596
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1332
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262596 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 9.558e-30
Identity = 94/290 (32.41%), Postives = 133/290 (45.86%), Query Frame = 1
Query:  112 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFQGFSEPLLSFLR-TPSHSTKGEI 975
            L   FY  +CP+A   I+  V            S LR  FHDC    CDAS+LL     T  E+    + G +R F  I+NIK  +E  C   VSCADIL ++ RD VVALGGP   +  GRRD   + A +    LP  + S S +   F    ++   +VAL G+H++G+  C     R+Y   D  +N      +   CP +  +         D  TP   DN YY N+L  KGL+  D  L  ++ T   V+  A +   F   F+  ++      P   T+G+I
Sbjct:   25 LSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLL-----TGMEQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIYGG-DTNINTAFATSLKANCPQSGGNTNLANL---DTMTPNAFDNAYYTNLLSQKGLLHSDQVLFNNETTDNTVRNFASNAAAFSSAFTTAMIKMGNIAPLTGTQGQI 303          
BLAST of DY262596 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 8.946e-28
Identity = 84/261 (32.18%), Postives = 127/261 (48.66%), Query Frame = 1
Query:  118 MNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKM 885
            + FY + C   E I+R  V+   +     A   LR  FHDC V  CD S+LL       SE+    +  +R F  IE  K  +E+ CP  VSCADIL L+ RD VV  GG    +  GR DGR S+A   +  LP  +DS++   + FAA  ++   LV L+G H++G   C  +  R        + DP+++P  VP +L +CP           V  D G+    D ++ R +  ++ ++  D  L  D  TR  ++++
Sbjct:   39 VGFYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLLAGNT---SERTAVPNRSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQAS--DVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCPQ-----NGGTRVELDEGSVDKFDTSFLRKVTSSRVVLQSDLVLWKDPETRAIIERL 289          
BLAST of DY262596 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 5.427e-25
Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 1
Query:  106 PGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVERECPG-VVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRK--SRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSV 618
            PGL  +FYK +CP+AE I+R  V+   +R    A   LR  FHDC VQ CDAS+LLD +     E++   +  +R   F+ I +I + + +EC G VVSC+D+L L+ RD VV  GGP   +  GRRD     ++ ++L   LP    ++  +L   + I +DA  LVAL G H++
Sbjct:   39 PGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSG-LPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of DY262596 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 6.634e-23
Identity = 75/266 (28.20%), Postives = 120/266 (45.11%), Query Frame = 1
Query:  160 IREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGV-VSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFQGFSEPLLSFLRTP 951
            ++E V            S +R  FHDC V  CDA LLL+ T     E+     +  +R F  IE  K+ V+ + P + VSCADIL ++ RD      G    +  GR+D R +        L   N++++  L +FAA G +   +VALLGSH++G   C  L       +   +NP  V  +   C   +    A   V  D  TP   D  Y+ ++++++GL+  D++L     T   V++   +   F   F+  ++     P
Sbjct:   75 VKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARCPLLC------ISTFINPARVSTLNCNCSGTV---NATGLVGLD-PTPTTWDQRYFSDVVNDQGLLFSDNELLKGNTTNAAVRRYRDAMGAFLTDFAAAMVKMSNLP 330          
BLAST of DY262596 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.251e-21
Identity = 70/250 (28.00%), Postives = 112/250 (44.80%), Query Frame = 1
Query:  211 SWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGV-VSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFQGFSEPLLSFLRTP 951
            S +R  FHDC V  CD  +LLD    T + ++     +  +R F  I   K++V   CP + VSCADIL ++ RD +  LGG    +  GR D   +        LP  +D+++V +++F+        +VAL G+H+VG   C          V  + N +    +   C   + D    Q       TP V D  YY N+ +N+G+M  D  L  +  T  +V   + +   F + F+  ++     P
Sbjct:  102 SLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARC--------STVCTSGNVNPAAQLQCNCSATLTDSDLQQL----DTTPAVFDKVYYDNLNNNQGIMFSDQVLTGNTTTAGFVTTYSNNVTVFLEDFAAAMIKMGNLP 339          
BLAST of DY262596 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.640e-21
Identity = 71/244 (29.10%), Postives = 108/244 (44.26%), Query Frame = 1
Query:  211 SWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGV-VSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFQGFSEPLL 933
            S +R  FHDC V  CD  +LLD    T + ++     +   R +  I   K++V   CP V VSCADIL ++ RD V  LGG    +  GR D R +        LP   D+++V +++F+        +VAL G+H+VG   C          V  + N +    +   C   + D    Q       TP + D  YY N+  N+G+M  D  L  D  T  +V   +   + F   F+  ++
Sbjct:  103 SLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARC--------STVCTSGNVNPAAQLQCNCSATLTDSDLQQL----DTTPTMFDKVYYDNLNSNQGIMFSDQVLTGDATTAGFVTDYSNDVNVFLGDFAAAMI 334          
BLAST of DY262596 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 4.025e-20
Identity = 70/244 (28.69%), Postives = 107/244 (43.85%), Query Frame = 1
Query:  211 SWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGV-VSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFQGFSEPLL 933
            S +R  FHDC V  CD  +LLD    T + ++     +   R +  I   K++V   CP + VSCADIL ++ RD V  LGG    +  GR D R +        LP   D+++V +++F         +VAL G+H+VG   C          V  + N +    +   C   + D    Q       TP + D  YY N+ +N+G+M  D  L  D  T  +V   +     F   F+  ++
Sbjct:  102 SLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARC--------STVCTSGNVNPAAQLQCNCSATLTDSDLQQL----DTTPTMFDKVYYDNLNNNQGIMFSDQVLTGDATTAGFVTDYSNDVSVFLGDFAAAMI 333          
BLAST of DY262596 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.189e-17
Identity = 66/266 (24.81%), Postives = 107/266 (40.23%), Query Frame = 1
Query:  160 IREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGV-VSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFQGFSEPLLSFLRTP 951
            ++E V            S +R  FHDC V  CD  +LL+ T     E+     S  +R F  I+  K   + +C    VSCAD+L ++ RD           +  GR+D R +        LP   D++S+   +FA  G +   +V L G+H+VG + C  L           LN +    +   CP +  D   V        +P   D  Y+  ++  +GL+  D +L     T   V++   +   F   F+  ++     P
Sbjct:   76 VKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRCAVLC------TSTNLNQNRSATLQCTCPASANDTGLVGL----DPSPGTFDKKYFEELVKGQGLLFSDQELMQSNATVTAVRRYRDATGAFLTDFAAAMVKMSNLP 331          
The following BLAST results are available for this feature:
BLAST of DY262596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER1_WHEAT9.558e-3032.41Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER69_ARATH8.946e-2832.18Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER1_SORBI5.427e-2539.20Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PERA_IPOBA6.634e-2328.20Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER2_SOLLC1.251e-2128.00Suberization-associated anionic peroxidase 2 OS=So... [more]
PER1_SOLLC3.640e-2129.10Suberization-associated anionic peroxidase 1 OS=So... [more]
PERX_SOLTU4.025e-2028.69Suberization-associated anionic peroxidase OS=Sola... [more]
PERN_IPOBA3.189e-1724.81Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BF09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262596 ID=DY262596; Name=DY262596; organism=Citrus clementina; type=EST; length=1332bp
AGAGTAGAAGAGAAAATGGGTACGAAAGCTGTCTTCTTGCTTTTAGCTTT
GCTTTCCTTCTCAGCTGTGTCTCTGAGGTCTGCTTTGGCAGAAAATGAAG
AGGACCCAGGTCTTGTTATGAATTTTTACAAGGATACATGCCCTCAGGCC
GAGGACATTATCAGGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAA
CACTGCATTTTCTTGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGT
CTTGTGATGCTTCACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAG
AAGGAGATGGACAGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAA
CATCAAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTG
ATATCCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCT
TACATTCCTCTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGA
GATACTTGAGCAGTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTC
TTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTG
CTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCACCG
TCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGCATA
TGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAGTAT
GTGAGGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTATAG
GAACATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAGCCA
CCGACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCAAGAGTCAAGAC
TACTTCTTCCAGGGATTTTCAGAGCCATTACTCTCCTTTCTGAGAACACC
CTCTCACAGTACAAAGGGTGAGATCGAAAGGGTTGCATTCTTGCAAACAA
GCTCACGACCAGTTCTAACTAGCTAACAGCTGGATTACCTACAACAAGTT
AATAACTCCAAATTGTTTCTTTCTTGGTTCCTTCATGAAGGAAAAAAAGA
AGGGGAAAAGAACCTTCCCAATAAAAAAGGTTTTTTCTAAATGGGGTTGG
TTTTCCGGGGGAAAGGTTTCCATATTAAGGGCTTATAATGTTTCCTTAAA
AAGGAACCCTCCCAAAGGGTTTAAACCCCCAGGGGTTTTTTCCTTTTTTT
CTCCCCGGGGGGGGGGGTGGGGGGTTTTTGGGGTTTTTATTTTTAAAATT
TTTTCTTCAAAAAAGGGGGGGGGGGGGGGGGG
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