DY262667

Overview
NameDY262667
Unique NameDY262667
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1334
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: YNF5_SCHPO (Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe GN=SPBC17A3.05c PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 8.091e-29
Identity = 77/245 (31.43%), Postives = 129/245 (52.65%), Query Frame = 3
Query:  162 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESEPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKD--YYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAAR-----------GFNGFYDSDIDAEEIFRN------------FFFGGMPPAR 821
            M+ ++++AL+C  + ++ L +G+  +A+KF +K+ R+  +   +D +  IE +  T    P A P  + +  +    +                 +T EQ  +V++I K K+  YYEIL ++++CT  +++K+Y+KL+L++HPDKN AP A+EAFK VSKAFQ LS+   R  YD TG D     P +   AA            GF+ +  +++  E++F +            FFFGG P  R
Sbjct:    1 MESSREEALRCIGLARKYLNAGEYDKALKFANKSLRIHATTEGEDFVKQIEKQKLTGSPNPQATPKQE-NKSNFFSEKQSVRENGNSSAGEKKQKWTSEQHLLVQKIIKYKNHQYYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHYDRTGMD-----PESRASAASSSFSSNAGGHPGFSAYPQANMSPEDLFNSFFGDQFFSGPGTFFFGGGPGIR 239          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJC18_BOVIN (DnaJ homolog subfamily C member 18 OS=Bos taurus GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.182e-25
Identity = 64/126 (50.79%), Postives = 87/126 (69.05%), Query Frame = 3
Query:  447 YTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY-QPRTHTRAARGFNGF--YDSDIDAEEIFRNFFFGGMPP 815
            YTEEQ+  V++IKK ++YYEILGV R  + E+++KAYRKL+LK HPDKN APGA +AFKA+  AF  LSN + R +YD  G ++  +  PR     AR +N +  +++DI  EE+F N FFGG  P
Sbjct:   66 YTEEQLLGVQRIKKCRNYYEILGVSRDASDEELKKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTAPR-----ARPYNYYRDFETDITPEELF-NVFFGGHFP 185          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJC18_HUMAN (DnaJ homolog subfamily C member 18 OS=Homo sapiens GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 9.258e-25
Identity = 63/126 (50.00%), Postives = 87/126 (69.05%), Query Frame = 3
Query:  447 YTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY-QPRTHTRAARGFNGF--YDSDIDAEEIFRNFFFGGMPP 815
            Y+EEQ+  V++IKK ++YYEILGV R  + E+++KAYRKL+LK HPDKN APGA +AFKA+  AF  LSN + R +YD  G ++  +  PR     AR +N +  +++DI  EE+F N FFGG  P
Sbjct:   66 YSEEQLLGVQRIKKCRNYYEILGVSRDASDEELKKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTAPR-----ARPYNYYRDFEADITPEELF-NVFFGGHFP 185          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJC18_MOUSE (DnaJ homolog subfamily C member 18 OS=Mus musculus GN=Dnajc18 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.694e-24
Identity = 61/127 (48.03%), Postives = 88/127 (69.29%), Query Frame = 3
Query:  447 YTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQ-PRTHTRAARGFNGF--YDSDIDAEEIFRNFFFGGMPPA 818
            YTEEQ+  V++IKK ++YY+ILGV  + + E+++KAY+KL+LK HPDKN APGA EAFKA+  AF  LSN + R +YD  G ++  +  PR     AR ++ +  +++DI  EE+F N FFGG  P+
Sbjct:   66 YTEEQLRGVQRIKKCRNYYDILGVSHNASDEELKKAYKKLALKFHPDKNCAPGATEAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTVPR-----ARSYHYYKDFEADISPEELF-NVFFGGHFPS 186          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJC18_MACFA (DnaJ homolog subfamily C member 18 OS=Macaca fascicularis GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.001e-24
Identity = 62/126 (49.21%), Postives = 86/126 (68.25%), Query Frame = 3
Query:  447 YTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY-QPRTHTRAARGFNGF--YDSDIDAEEIFRNFFFGGMPP 815
            Y+EEQ+  V++IKK ++YYEILGV R  + E+++KAYRKL+LK HPDKN APGA +AFKA+  AF  LSN + R +YD  G ++  +  PR     AR +N +  +++DI  EE+  N FFGG  P
Sbjct:   66 YSEEQLLGVQRIKKCRNYYEILGVSRDASDEELKKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTAPR-----ARPYNYYRDFEADITPEEL-SNVFFGGHFP 185          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_METTE (Chaperone protein dnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.812e-19
Identity = 58/134 (43.28%), Postives = 71/134 (52.99%), Query Frame = 3
Query:  489 TKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMPPARTQFRHFNFGQGVATGTADRNGSD 890
            T+DYYEILG+ R  T ED++K+YRKL+LK HPD+NK PGAEE FK +S+A+  LS+ E R +YD  G                G NG Y     AE+IFR   F G       F    FG         R GSD
Sbjct:    4 TRDYYEILGLSRDATPEDIKKSYRKLALKYHPDRNKEPGAEEKFKEISEAYAVLSDPEKRAQYDRFGH--------------AGINGQY----TAEDIFRGADFSGFGDIFEMF----FGGSRRGPRGPRRGSD 115          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: Y5729_DICDI (J domain-containing protein DDB_G0295729 OS=Dictyostelium discoideum GN=DDB_G0295729 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.295e-18
Identity = 55/187 (29.41%), Postives = 96/187 (51.34%), Query Frame = 3
Query:  162 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIES-------------EPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDI 683
            M+ N++DA+K  ++G+   +  +  +++   +K++RL P+  +D +IS  E+               N N NG S   +  PS  +T                     YT+EQ  I +++  +K +YE L +  +CT  D+++ YR L+  +HPDKNKAP A++AF+ +  A   LS+   RK+YD+
Sbjct:    1 MECNREDAIKAKELGESYFKQQNYTKSLSLFTKSKRLYPTDGIDQLISKAEAFLNNSNSNSNNNNSSNNNNNGNSGNKSYTPSSTTTTA-----------TTATSTLEYTKEQFEISKRVLDSKTHYEKLSLLVNCTDVDIKRQYRALAKLLHPDKNKAPHAQQAFQEIKVANDILSDAIQRKRYDV 176          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_BACST (Chaperone protein dnaJ OS=Bacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.691e-18
Identity = 50/114 (43.86%), Postives = 65/114 (57.02%), Query Frame = 3
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 806
            +DYYEILGV ++ T E+++KAYRKLS K HPD NK P A E FK + +A++ LS+D+ R  YD  G  +P           +GF GF   D D          E+IF  FF GG
Sbjct:    4 RDYYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGQADP----------NQGFGGFRSDDFDLGGFSGFGGFEDIFNTFFGGG 107          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOSW (Chaperone protein dnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.920e-18
Identity = 50/114 (43.86%), Postives = 65/114 (57.02%), Query Frame = 3
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDID---------AEEIFRNFFFGG 806
            +DYYEILGV ++ T E+++KAYRKLS K HPD NK P A E FK + +A++ LS+D+ R  YD  G  +P           +GF GF   D D          E+IF  FF GG
Sbjct:    4 RDYYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGHADP----------NQGFGGFRSDDFDFGGFSGFGGFEDIFSTFFGGG 107          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 6.426e-18
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 3
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA-EEIFRNFFFGG 806
            +DYYE+LGV +S + ++++KAYRKLS K HPD NK  GA+E FK +S+A++ LS++  R  YD  G D P        +   G  GF  SD    E+IF +FF GG
Sbjct:    4 RDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGP--------QGGFGSQGFGGSDFGGFEDIFSSFFGGG 101          
The following BLAST results are available for this feature:
BLAST of DY262667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
YNF5_SCHPO8.091e-2931.43Uncharacterized J domain-containing protein C17A3.... [more]
DJC18_BOVIN3.182e-2550.79DnaJ homolog subfamily C member 18 OS=Bos taurus G... [more]
DJC18_HUMAN9.258e-2550.00DnaJ homolog subfamily C member 18 OS=Homo sapiens... [more]
DJC18_MOUSE2.694e-2448.03DnaJ homolog subfamily C member 18 OS=Mus musculus... [more]
DJC18_MACFA6.001e-2449.21DnaJ homolog subfamily C member 18 OS=Macaca fasci... [more]
DNAJ_METTE5.812e-1943.28Chaperone protein dnaJ OS=Methanosarcina thermophi... [more]
Y5729_DICDI1.295e-1829.41J domain-containing protein DDB_G0295729 OS=Dictyo... [more]
DNAJ_BACST1.691e-1843.86Chaperone protein dnaJ OS=Bacillus stearothermophi... [more]
DNAJ_GEOSW4.920e-1843.86Chaperone protein dnaJ OS=Geobacillus sp. (strain ... [more]
DNAJ_STAES6.426e-1845.28Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CD10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262667 ID=DY262667; Name=DY262667; organism=Citrus clementina; type=EST; length=1334bp
CACCCCCTGAATCCTTGAACCCCTCAAATTCAAATTCTTATGTCAGATCC
ATTATATTAACACTATTATGATTCGCAATCGGCAATAAATTAGGATTAGG
GTTTGTGATATTTATATATATATTGTGTTATTTGTTCTTGTGTGGTTTTT
CAATTTTCATCATGGATGGGAATAAAGATGACGCCTTGAAATGTTTCAAA
ATCGGCAAAGAAGCGCTAGAATCAGGCGATCGAGCGCGTGCGATCAAATT
TCTGTCCAAGGCTCGCCGCCTCGATCCTTCTCTTCCGGTTGACGACATCA
TCTCATCCATCGAGTCCGAGCCCAACACAAACCCTAACGGCCCGTCCGCA
GAGCCCAATTCAAAGCCGTCCGATCAATCGACGATCCGACACCGGGGCCC
ATCAACTGGCGCGTCTCCGTCAGCTTCTTCTTCGTCCTCTCCGGCGTACA
CCGAAGAGCAAATCGCGATCGTGAGACAGATTAAGAAGACGAAAGATTAT
TACGAAATCCTAGGGGTTGAAAGATCTTGTACGGTCGAAGATGTACGGAA
AGCTTATAGAAAATTATCGCTGAAGGTTCATCCCGATAAGAACAAAGCTC
CAGGCGCCGAAGAAGCCTTTAAAGCGGTATCAAAGGCGTTTCAGTGTTTG
AGCAACGATGAGAGTCGGAAAAAATATGATATTACTGGGTCAGATGAGCC
CGTTTATCAGCCACGGACTCATACTCGGGCCGCCCGTGGGTTTAACGGGT
TTTATGATTCGGATATTGATGCTGAGGAGATTTTTAGGAACTTTTTCTTC
GGGGGTATGCCGCCAGCCAGGACTCAGTTTCGGCATTTTAATTTCGGGCA
GGGAGTGGCCACGGGAACGGCTGATCGTAATGGCTCCGATGGGTTTAATT
TACGTGCCTTGATTCAGTTTGTTGCTGTGATTTTGATAATTCTCCTTCCG
ATTTTGCCGTCTTCTGATTCAATTTATGCCTTTGTCAAGGTCTTACCTTT
ATAATACCAATTTACCACGGAAAAGAGGGGTGAATTTTTTAGTGAAGTCT
AACAAATTTTAACCGGACTATCCGGGGGGGTAAGGGTTCAAAGAGTGAGG
CTGGGAAAAACAAAGTTAAAAAGGATTATTTTAATATTCCTTGCCAAAAA
TTGCCCGTTTAAAAATTTCCCGGGCCCCCCGGGGGGGGTTTTTTAAAAAA
GGAAACCTCCCCCTTTGTTGAAGAGTGGGGACCAAAAAAATTTTACTAAT
TCTTCCCCCCCCGTCTGAGAAAAAAATCAAAAAACCAAAAAAAAGGGTCT
CTTTATAACGTGGCGCCCCCCCCTTTTTTGTTCT
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