DY262667

Overview
NameDY262667
Unique NameDY262667
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1334
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAS (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MSSA476) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.212e-16
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 806
            +DYYE+LG+ +  + ++++KAYRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG   SD            E+IF +FF GG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG---SDFGGFSGFGGGGFEDIFSSFFGGG 108
[Close]
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAR (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MRSA252) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.212e-16
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 806
            +DYYE+LG+ +  + ++++KAYRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG   SD            E+IF +FF GG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG---SDFGGFSGFGGGGFEDIFSSFFGGG 108
[Close]
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAN (Chaperone protein dnaJ OS=Staphylococcus aureus (strain N315) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.212e-16
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 806
            +DYYE+LG+ +  + ++++KAYRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG   SD            E+IF +FF GG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG---SDFGGFSGFGGGGFEDIFSSFFGGG 108
[Close]
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAM (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.212e-16
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 806
            +DYYE+LG+ +  + ++++KAYRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG   SD            E+IF +FF GG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG---SDFGGFSGFGGGGFEDIFSSFFGGG 108
[Close]
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAE (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Newman) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.212e-16
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 806
            +DYYE+LG+ +  + ++++KAYRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG   SD            E+IF +FF GG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG---SDFGGFSGFGGGGFEDIFSSFFGGG 108
[Close]
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAC (Chaperone protein dnaJ OS=Staphylococcus aureus (strain COL) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.212e-16
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 806
            +DYYE+LG+ +  + ++++KAYRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG   SD            E+IF +FF GG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG---SDFGGFSGFGGGGFEDIFSSFFGGG 108
[Close]
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAB (Chaperone protein dnaJ OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.212e-16
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 806
            +DYYE+LG+ +  + ++++KAYRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG   SD            E+IF +FF GG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG---SDFGGFSGFGGGGFEDIFSSFFGGG 108
[Close]
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA9 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.212e-16
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 806
            +DYYE+LG+ +  + ++++KAYRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG   SD            E+IF +FF GG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG---SDFGGFSGFGGGGFEDIFSSFFGGG 108
[Close]
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA8 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.212e-16
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 806
            +DYYE+LG+ +  + ++++KAYRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG   SD            E+IF +FF GG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG---SDFGGFSGFGGGGFEDIFSSFFGGG 108
[Close]
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA3 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.212e-16
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 806
            +DYYE+LG+ +  + ++++KAYRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG   SD            E+IF +FF GG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG---SDFGGFSGFGGGGFEDIFSSFFGGG 108
The following BLAST results are available for this feature:
BLAST of DY262667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
DNAJ_STAAS1.212e-1642.11Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAR1.212e-1642.11Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAN1.212e-1642.11Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAM1.212e-1642.11Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAE1.212e-1642.11Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAC1.212e-1642.11Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAB1.212e-1642.11Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA91.212e-1642.11Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA81.212e-1642.11Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA31.212e-1642.11Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA100CD10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262667 ID=DY262667; Name=DY262667; organism=Citrus clementina; type=EST; length=1334bp
CACCCCCTGAATCCTTGAACCCCTCAAATTCAAATTCTTATGTCAGATCC
ATTATATTAACACTATTATGATTCGCAATCGGCAATAAATTAGGATTAGG
GTTTGTGATATTTATATATATATTGTGTTATTTGTTCTTGTGTGGTTTTT
CAATTTTCATCATGGATGGGAATAAAGATGACGCCTTGAAATGTTTCAAA
ATCGGCAAAGAAGCGCTAGAATCAGGCGATCGAGCGCGTGCGATCAAATT
TCTGTCCAAGGCTCGCCGCCTCGATCCTTCTCTTCCGGTTGACGACATCA
TCTCATCCATCGAGTCCGAGCCCAACACAAACCCTAACGGCCCGTCCGCA
GAGCCCAATTCAAAGCCGTCCGATCAATCGACGATCCGACACCGGGGCCC
ATCAACTGGCGCGTCTCCGTCAGCTTCTTCTTCGTCCTCTCCGGCGTACA
CCGAAGAGCAAATCGCGATCGTGAGACAGATTAAGAAGACGAAAGATTAT
TACGAAATCCTAGGGGTTGAAAGATCTTGTACGGTCGAAGATGTACGGAA
AGCTTATAGAAAATTATCGCTGAAGGTTCATCCCGATAAGAACAAAGCTC
CAGGCGCCGAAGAAGCCTTTAAAGCGGTATCAAAGGCGTTTCAGTGTTTG
AGCAACGATGAGAGTCGGAAAAAATATGATATTACTGGGTCAGATGAGCC
CGTTTATCAGCCACGGACTCATACTCGGGCCGCCCGTGGGTTTAACGGGT
TTTATGATTCGGATATTGATGCTGAGGAGATTTTTAGGAACTTTTTCTTC
GGGGGTATGCCGCCAGCCAGGACTCAGTTTCGGCATTTTAATTTCGGGCA
GGGAGTGGCCACGGGAACGGCTGATCGTAATGGCTCCGATGGGTTTAATT
TACGTGCCTTGATTCAGTTTGTTGCTGTGATTTTGATAATTCTCCTTCCG
ATTTTGCCGTCTTCTGATTCAATTTATGCCTTTGTCAAGGTCTTACCTTT
ATAATACCAATTTACCACGGAAAAGAGGGGTGAATTTTTTAGTGAAGTCT
AACAAATTTTAACCGGACTATCCGGGGGGGTAAGGGTTCAAAGAGTGAGG
CTGGGAAAAACAAAGTTAAAAAGGATTATTTTAATATTCCTTGCCAAAAA
TTGCCCGTTTAAAAATTTCCCGGGCCCCCCGGGGGGGGTTTTTTAAAAAA
GGAAACCTCCCCCTTTGTTGAAGAGTGGGGACCAAAAAAATTTTACTAAT
TCTTCCCCCCCCGTCTGAGAAAAAAATCAAAAAACCAAAAAAAAGGGTCT
CTTTATAACGTGGCGCCCCCCCCTTTTTTGTTCT
back to top