DY262667

Overview
NameDY262667
Unique NameDY262667
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1334
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_HAEIG (Chaperone protein dnaJ OS=Haemophilus influenzae (strain PittGG) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11
Identity = 39/109 (35.78%), Postives = 64/109 (58.72%), Query Frame = 3
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFF---FGG 806
            KDYYE+LG+++  +  D+++AY++L+ K HPDKN+ +  AEE FK +++A++ L +D+ R  YD  G     +        A GF G +    D  ++F + F   FGG
Sbjct:    4 KDYYEVLGLKKGASENDIKRAYKRLASKHHPDKNQGSKEAEEKFKEINEAYEVLGDDQKRAAYDQYG-----HAAFEQGGGAGGFGGGF-GGADFGDMFGDIFGDIFGG 106          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_COLP3 (Chaperone protein dnaJ OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11
Identity = 37/106 (34.91%), Postives = 60/106 (56.60%), Query Frame = 3
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKA-PGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGG 806
            +DYYE LGV +  + ++V+KAY+KL++K HPD+ +     EE FK V +A++ L++D+ R  YD  G     ++   +     G  G +  D    +IF + F GG
Sbjct:    4 RDYYETLGVSQDASEKEVKKAYKKLAMKYHPDRTQGDKSKEETFKEVKEAYEILNDDQKRAAYDQYG--HAAFEQGGNGGGGGGHGGGFGQDFG--DIFGDIFGGG 105          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOPE (Chaperone protein dnaJ OS=Clostridium perfringens GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11
Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 3
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPG---AEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEE------IFRNFFFGG 806
            +DYYE+LG+++  + +++++A+RK+++K HPD+N  PG   AEE FK V++A+  L + + + KYD  G         +      GF GF     D  E      IF +FF GG
Sbjct:    4 RDYYEVLGLQKGASDDEIKRAFRKMAMKYHPDRN--PGDKEAEENFKEVNEAYDVLKDPDKKAKYDQFGH---AAFDGSGGFGGGGFGGFDAGGFDFSEMGGFGDIFESFFGGG 112          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_BLOFL (Chaperone protein dnaJ OS=Blochmannia floridanus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11
Identity = 39/115 (33.91%), Postives = 61/115 (53.04%), Query Frame = 3
Query:  495 DYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAP-GAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFF---FGGMPPARTQ 827
            DYYEILGV ++    +++K+Y++L++K HPD+N     AE  FK + +A++ LSN E R  YD        Y      + + G  G      D  +IF + F   FGG   +R++
Sbjct:    5 DYYEILGVSKNADEREIKKSYKRLAMKFHPDRNPGDVSAESKFKEIKEAYEVLSNPEKRSAYD-------QYGHAIFEQNSGGMGGSNTGGSDFSDIFGDVFGDIFGGSRRSRSR 112          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_ACTPJ (Chaperone protein dnaJ OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11
Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 3
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSD--IDAEEIFRNFFFGG 806
            KDYYE+LG+++  +  D+++AY++L+ K HPDKN+ +  AEE FK +++A++ L + E R  YD  G     +        A GF G +        E+IF   F GG
Sbjct:    4 KDYYEVLGLQKGASENDIKRAYKRLASKHHPDKNQGSKDAEEKFKEINEAYEVLGDAEKRAAYDQYG-----HAAFEQGGGAGGFGGGFGGGGFGGFEDIFSEMFGGG 106          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ_ACTP2 (Chaperone protein dnaJ OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11
Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 3
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSD--IDAEEIFRNFFFGG 806
            KDYYE+LG+++  +  D+++AY++L+ K HPDKN+ +  AEE FK +++A++ L + E R  YD  G     +        A GF G +        E+IF   F GG
Sbjct:    4 KDYYEVLGLQKGASENDIKRAYKRLASKHHPDKNQGSKDAEEKFKEINEAYEVLGDAEKRAAYDQYG-----HAAFEQGGGAGGFGGGFGGGGFGGFEDIFSEMFGGG 106          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNAJ1_NOCFA (Chaperone protein dnaJ 1 OS=Nocardia farcinica GN=dnaJ1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 3
Query:  492 KDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMPPA 818
            +DYY +LGV R+ T +++++AYRKL+ ++HPD N    A+  FK VS A++ LS+ E R+  D+ G       P      A GF+G     +   ++F   FFGGM  A
Sbjct:    3 RDYYGLLGVARNATDQEIKRAYRKLARELHPDVNPDEAAQARFKEVSTAYEVLSDPEKRRIVDMGG------DPLESGGGAGGFSGAGFGGLG--DVF-EAFFGGMSGA 102          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJC27_HUMAN (DnaJ homolog subfamily C member 27 OS=Homo sapiens GN=DNAJC27 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11
Identity = 31/64 (48.44%), Postives = 49/64 (76.56%), Query Frame = 3
Query:  447 YTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKA 638
            +T+EQ   +R+I+ +KD +++LGV+   + ++V KAYRKL++ +HPDK  APG+E+AFKAV  A
Sbjct:  201 FTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNA 264          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJC27_BOVIN (DnaJ homolog subfamily C member 27 OS=Bos taurus GN=DNAJC27 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.937e-11
Identity = 31/64 (48.44%), Postives = 49/64 (76.56%), Query Frame = 3
Query:  447 YTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKA 638
            +T+EQ   +R+I+ +KD +++LGV+   + ++V KAYRKL++ +HPDK  APG+E+AFKAV  A
Sbjct:  201 FTKEQADTIRRIRSSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNA 264          
The following BLAST results are available for this feature:
BLAST of DY262667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
DNAJ_HAEIG9.937e-1135.78Chaperone protein dnaJ OS=Haemophilus influenzae (... [more]
DNAJ_COLP39.937e-1134.91Chaperone protein dnaJ OS=Colwellia psychrerythrae... [more]
DNAJ_CLOPE9.937e-1135.09Chaperone protein dnaJ OS=Clostridium perfringens ... [more]
DNAJ_BLOFL9.937e-1133.91Chaperone protein dnaJ OS=Blochmannia floridanus G... [more]
DNAJ_ACTPJ9.937e-1136.11Chaperone protein dnaJ OS=Actinobacillus pleuropne... [more]
DNAJ_ACTP29.937e-1136.11Chaperone protein dnaJ OS=Actinobacillus pleuropne... [more]
DNAJ1_NOCFA9.937e-1137.61Chaperone protein dnaJ 1 OS=Nocardia farcinica GN=... [more]
DJC27_HUMAN9.937e-1148.44DnaJ homolog subfamily C member 27 OS=Homo sapiens... [more]
DJC27_BOVIN9.937e-1148.44DnaJ homolog subfamily C member 27 OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CD10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262667 ID=DY262667; Name=DY262667; organism=Citrus clementina; type=EST; length=1334bp
CACCCCCTGAATCCTTGAACCCCTCAAATTCAAATTCTTATGTCAGATCC
ATTATATTAACACTATTATGATTCGCAATCGGCAATAAATTAGGATTAGG
GTTTGTGATATTTATATATATATTGTGTTATTTGTTCTTGTGTGGTTTTT
CAATTTTCATCATGGATGGGAATAAAGATGACGCCTTGAAATGTTTCAAA
ATCGGCAAAGAAGCGCTAGAATCAGGCGATCGAGCGCGTGCGATCAAATT
TCTGTCCAAGGCTCGCCGCCTCGATCCTTCTCTTCCGGTTGACGACATCA
TCTCATCCATCGAGTCCGAGCCCAACACAAACCCTAACGGCCCGTCCGCA
GAGCCCAATTCAAAGCCGTCCGATCAATCGACGATCCGACACCGGGGCCC
ATCAACTGGCGCGTCTCCGTCAGCTTCTTCTTCGTCCTCTCCGGCGTACA
CCGAAGAGCAAATCGCGATCGTGAGACAGATTAAGAAGACGAAAGATTAT
TACGAAATCCTAGGGGTTGAAAGATCTTGTACGGTCGAAGATGTACGGAA
AGCTTATAGAAAATTATCGCTGAAGGTTCATCCCGATAAGAACAAAGCTC
CAGGCGCCGAAGAAGCCTTTAAAGCGGTATCAAAGGCGTTTCAGTGTTTG
AGCAACGATGAGAGTCGGAAAAAATATGATATTACTGGGTCAGATGAGCC
CGTTTATCAGCCACGGACTCATACTCGGGCCGCCCGTGGGTTTAACGGGT
TTTATGATTCGGATATTGATGCTGAGGAGATTTTTAGGAACTTTTTCTTC
GGGGGTATGCCGCCAGCCAGGACTCAGTTTCGGCATTTTAATTTCGGGCA
GGGAGTGGCCACGGGAACGGCTGATCGTAATGGCTCCGATGGGTTTAATT
TACGTGCCTTGATTCAGTTTGTTGCTGTGATTTTGATAATTCTCCTTCCG
ATTTTGCCGTCTTCTGATTCAATTTATGCCTTTGTCAAGGTCTTACCTTT
ATAATACCAATTTACCACGGAAAAGAGGGGTGAATTTTTTAGTGAAGTCT
AACAAATTTTAACCGGACTATCCGGGGGGGTAAGGGTTCAAAGAGTGAGG
CTGGGAAAAACAAAGTTAAAAAGGATTATTTTAATATTCCTTGCCAAAAA
TTGCCCGTTTAAAAATTTCCCGGGCCCCCCGGGGGGGGTTTTTTAAAAAA
GGAAACCTCCCCCTTTGTTGAAGAGTGGGGACCAAAAAAATTTTACTAAT
TCTTCCCCCCCCGTCTGAGAAAAAAATCAAAAAACCAAAAAAAAGGGTCT
CTTTATAACGTGGCGCCCCCCCCTTTTTTGTTCT
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