DY262670

Overview
NameDY262670
Unique NameDY262670
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1249
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.911e-19
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 278
            YY ILG+ K AS +D+KKAYRK A++ HPDK   P   E+FKE+A+AYEVLSDP+KREIYDQ+GE+ LK
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALRFHPDKNKSPQAEERFKEVAEAYEVLSDPKKREIYDQFGEEGLK 73          

HSP 2 Score: 82.8037 bits (203), Expect = 4.636e-15
Identity = 52/166 (31.33%), Postives = 73/166 (43.98%), Query Frame = 3
Query:  399 VIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCG 896
            VIH L+VSLE++Y+G +K+                                MK+S + L P                              G     E K+L + ++KG + G KITFP E DE P ++  DIVFV++ K+HPKFKR G ++     +SL EALCG
Sbjct:  160 VIHELRVSLEEIYSGCTKR--------------------------------MKISRKRLNPD-----------------------------GRSYRTEDKILTIEIKKGWKEGTKITFPREGDETPTSIPADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCG 264          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP7 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.027e-19
Identity = 77/288 (26.74%), Postives = 123/288 (42.71%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG---GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE------XXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSR-NVIXXXXXXXXXXXXXXXXXXXXQGSGM--KVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFHL 905
            YYEILGVS++A++D++K+AYR+ A K HPD     G  E+FKE+ +AYE+LS+PE R  YD++GE  +                 D F+                        +D+    K++  +   G  K++ +                           GSG   + +    G      +   CN   G+GE I +K  C  C G    QE K L++ +  G+ NG ++    E D        GD+   L  +   +F+R+G D+  E ++S  +A+ G  L
Sbjct:    5 YYEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEERFKEINRAYEILSEPETRARYDRFGEAGVSSGAGSGFEYGDMGGIADIFETIFSGFGGMGTGTSSRRRTGPVRGDDLRLDFKLNFREAVFGGEKEIRIRHLETCQVCEGSGAKPGTGSRTCSTCSGSGQVRRATRTPFGTFAQVSVCPTCN---GSGEVIEEK--CEACGGSGRKQETKKLKITIPAGVDNGTRLRVSREGDAGQRGGPPGDLYVYLSVETDEEFQREGIDIKSEISISYLQAILGCRL 287          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.179e-18
Identity = 43/69 (62.32%), Postives = 59/69 (85.51%), Query Frame = 3
Query:   75 TKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALK 278
            TK Y++LGVS +A++ +LKK YRKAA+K HPDK  GD EKFKE+++A+E+L+DP+KREIYDQYG +A +
Sbjct:    5 TKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAAR 73          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJA3_MOUSE (DnaJ homolog subfamily A member 3, mitochondrial OS=Mus musculus GN=Dnaja3 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.011e-18
Identity = 76/284 (26.76%), Postives = 122/284 (42.96%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAH-------DPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLS-RNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCG 896
            YY+ILGV +NASQ D+KKAY + A K HPD   D     EKF +LA+AYEVLSD  KR+ YD YG              +       DP ++                       ++ I  ++++      G +K+ +++  +                       GSGM+    + GP +   M+  C  C G G  I +   C  C+G    ++KK + + V  G+++GQ +  P    E        I    + ++ P F+R G D+  +  +S+ +A+ G
Sbjct:   94 YYQILGVPRNASQKDIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGTSSSGQGYWRGGPSVDPEELFRKIFGEFSSSPFGDFQNVFDQPQEYI--MELTFNQAAKGVNKEFTVNIMDTCERCDGKGNEPGTKVQHCHYCGGSGMETI--NTGPFV---MRSTCRRCGGRGSIITNP--CVVCRGAGQAKQKKRVTIPVPAGVEDGQTVRMPVGKRE--------IFVTFRVQKSPVFRRDGADIHSDLFISIAQAILG 360          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP4 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.480e-18
Identity = 81/308 (26.30%), Postives = 125/308 (40.58%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDP---FDI--XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE----------TINDKDRCPQCKGE-KVIQEK-------------KVLEVIVEKGMQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFHL 905
            YY+ILGVS++A Q+DLK+AYR+ A K HPD   + G  E+FKE+ +AYEVLSDPE R  YD++GE  +           D     DI                         +D+   LK+   +   G  K++ ++                         GSG K   +             C  C G G+          +      CP C G+ +VI++K             K L++ +  G+  G ++    E D        GD+   L  +E P+F+R+G ++  E  +S  +A+ G  L
Sbjct:    5 YYDILGVSRDAGQEDLKQAYRRLARKYHPDVNKEAGAEERFKEINRAYEVLSDPETRARYDRFGEAGVSGAAAGYGDMGDMGGFADIFESIFSGFGGVGAGTSRRRTGPSRGDDLRFDLKLEFREAIFGGEKQIRITH----------------LETCTTCNGSGAKPGTK----------PRTCGTCGGAGQVRRATRTPFGSFTQVSVCPTCNGKGQVIEDKCETCGGNGQAQVTKKLKITIPAGVDTGTRLRVSNEGDAGQQGGPAGDLYVYLFVQEDPEFRREGINILSEVKISYLQAILGSRL 286          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNJA (Chaperone protein dnaJ OS=Synechococcus sp. (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.641e-18
Identity = 74/284 (26.06%), Postives = 117/284 (41.20%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI--------XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCG 896
            YYEILGVS+++S++++K+AYR+ A K HPD   +P   ++FKE+ +AYEVLSD E R  YD++GE  L           D   I                               +D+   LK+   +   G  K++ +S   +                     G   +V      P         C  C G G  +  ++ C  C GE + Q  K L + +  G+ +G ++   GE D        GD+   L  +  P F+R G  +F +  +S  +A+ G
Sbjct:    5 YYEILGVSRDSSKEEIKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDDELRARYDRFGEAGLSGAAAAASGFQDFAGIGGFADLFESFFTNFAGGGVGYSRSRQGPVRGDDLRFDLKLEFLEAIFGGEKQIRISHLEVCPVCGGSGAKPGTDVKVCPTCGGAGQVRRATRTPFGNFTQVSICPTCGGAGRVL--EEPCYNCNGEGLAQTTKKLRINIPAGVDSGTRLRVSGEGDAGRRGGPPGDLYVYLFVEPDPDFQRDGLTIFSQVRVSYLQAILG 286          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 9.980e-18
Identity = 40/69 (57.97%), Postives = 57/69 (82.61%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 278
            YY+ LG+++ AS D++K+AYR+ A++ HPDK  +P   EKFKE+A+AY+VLSDP KREI+D+YGE+ LK
Sbjct:    5 YYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73          

HSP 2 Score: 74.3294 bits (181), Expect = 1.649e-12
Identity = 50/166 (30.12%), Postives = 70/166 (42.17%), Query Frame = 3
Query:  399 VIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCG 896
            V H L+VSLE++Y+G +KK                                MK+S + L P                              G+ +  E K+L + V++G + G KITFP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG
Sbjct:  164 VTHDLRVSLEEIYSGCTKK--------------------------------MKISHKRLNPD-----------------------------GKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCG 268          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGE (Chaperone protein dnaJ OS=Mycoplasma genitalium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.303e-17
Identity = 66/247 (26.72%), Postives = 105/247 (42.51%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDK---------GGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE---------------DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSM-IQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKI 746
            YYE+LG+SKNAS  D+K+A+RK A++ HPD+           + EKFKE+ +AYEVLSD EKR++YDQ+G + L           +PFDI                                       D+   ++++  ++ NG +K +   R V                       +G    I++        Q Q  C+ C G G+ I  K +C  C+  K     ++ E+ +  GM +G+ +
Sbjct:    8 YYEVLGISKNASSQDIKRAFRKLAMQYHPDRHKAENETTQKQNEEKFKEVNEAYEVLSDEEKRKLYDQFGHEGL-NASGFHEAGFNPFDIFNSVFGEGFSFGMDGDSPFDFIFNRSKKRQQQIVVPYNLDIALVIEINFFEMTNGCNKTIKYERKVSCHSCNGFGAEGGESGLDLCKDCNGNGFVIKNQRSIFGTIQSQVLCSTCNGQGKQI--KVKCKTCRSNKYTVTNQIKEINIPAGMYSGEAL 251          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 1.303e-17
Identity = 42/69 (60.87%), Postives = 55/69 (79.71%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 278
            +Y+ILG+ + AS D++KKAYRK A+K HPDK   P   E+FKE+A+AYEVLSD +KR+I+D YGED LK
Sbjct:    5 FYKILGLERKASDDEIKKAYRKLALKYHPDKNKSPQAEERFKEIAEAYEVLSDKKKRDIFDNYGEDGLK 73          

HSP 2 Score: 70.8626 bits (172), Expect = 1.823e-11
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 3
Query:  687 QEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCG 896
            +E+KVL + V+ G + G KITFP E D AP+    DIVF+++ K H  FKR+G DL     +SL +ALCG
Sbjct:  192 KEEKVLRITVKPGWKAGTKITFPQEGDSAPNKTPADIVFIIRDKPHSLFKREGIDLKYTAQISLKQALCG 261          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJ6A_XENLA (DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-A PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.223e-17
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   78 KYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF 317
            +YYE+LGV +NAS DD+KKAYR+ A+K HPDK  D       +FKE+A+AYEVLSD +KR+IYD+YG++ L            PF
Sbjct:    3 EYYEVLGVQRNASADDIKKAYRRLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLTNRGGGSHFDEAPF 87          
The following BLAST results are available for this feature:
BLAST of DY262670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJB4_BOVIN6.911e-1965.22DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNAJ_CYAP79.027e-1926.74Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
SIS1_YEAST1.179e-1862.32Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DNJA3_MOUSE2.011e-1826.76DnaJ homolog subfamily A member 3, mitochondrial O... [more]
DNAJ_CYAP44.480e-1826.30Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_SYNJA7.641e-1826.06Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNJB1_MOUSE9.980e-1857.97DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]
DNAJ_MYCGE1.303e-1726.72Chaperone protein dnaJ OS=Mycoplasma genitalium GN... [more]
DNAJ1_DROME1.303e-1760.87DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNJ6A_XENLA2.223e-1751.76DnaJ homolog subfamily B member 6-A OS=Xenopus lae... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CE02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262670 ID=DY262670; Name=DY262670; organism=Citrus clementina; type=EST; length=1249bp
TCTCGCGTCTACTCTGAAGATCTGAAATTTTTTAGTACAAGATGTTCGGA
AGAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAGATTCTCGGAGT
CTCAAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTATAGGAAAGCCG
CCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAGTTTAAAGAG
TTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCGTGAAATATA
TGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGGTGGTGGTGGTG
GTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGTGGCAGCCCA
TTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGGGGAGAGGATGT
AATCCATCCCCTCAAGGTTTCTTTGGAGGATCTCTACAATGGGACATCTA
AGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGTGCAAAGGGAAG
GGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGCCAGGGATCTGG
AATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGATTCAACAAATGC
AGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAATCAATGACAAG
GATCGCTGCCCACAATGTAAGGGTGAGAAGGTCATTCAGGAGAAAAAAGT
CTTGGAGGTTATTGTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGT
TCCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTGACATTGTA
TTTGTTCTACAACAGAAAGAGCACCCGAAATTTAAGCGAAAGGGTGATGA
CCTATTTGTTGAGCACACCCTGTCACTGACAGAAGCTCTCTGTGGCTTTC
ATTTGTAATAACTCATTTGAATGGGCGGCACTCCTCATCAAATCCAACCT
GGGGGAAGTAGTCCAGGCGGACCAATTCAGGCCATAAATGAAGAAAGGAT
GGCCTATGTATCAGAGGGCATTTAATAAAGGGGAAACTGTACTTTCTTTT
CCCTGGTGAATTTCCCTGAATTCCCGGGCCCAAAACCAGGGCAGAAAGCT
GGAAAACCGTACTACCTCCAGGGGACCTCATCCAGCCTCCCCAAATTGGG
GAACGTGATAAAGGGGGAAAAAAACCCCCCTCAGGGAGGGGAAATTTTGG
GGGAGAAAAAGGGCAAGAAGAACAACAAAAACAATCCTCCGGGAGGGAT
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