DY262670

Overview
NameDY262670
Unique NameDY262670
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1249
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 90.1225 bits (222), Expect = 2.904e-17
Identity = 39/69 (56.52%), Postives = 57/69 (82.61%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 278
            YY+ LG+++ AS +++K+AYR+ A++ HPDK  +P   EKFKE+A+AY+VLSDP KREI+D+YGE+ LK
Sbjct:    5 YYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73          

HSP 2 Score: 75.485 bits (184), Expect = 7.401e-13
Identity = 51/166 (30.72%), Postives = 70/166 (42.17%), Query Frame = 3
Query:  399 VIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCG 896
            V H L+VSLE++Y+G +KK                                MK+S + L P                              G+ +  E K+L + V+KG + G KITFP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG
Sbjct:  164 VTHDLRVSLEEIYSGCTKK--------------------------------MKISHKRLNPD-----------------------------GKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCG 268          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 2.904e-17
Identity = 39/69 (56.52%), Postives = 57/69 (82.61%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 278
            YY+ LG+++ AS +++K+AYR+ A++ HPDK  +P   EKFKE+A+AY+VLSDP KREI+D+YGE+ LK
Sbjct:    5 YYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73          

HSP 2 Score: 74.3294 bits (181), Expect = 1.649e-12
Identity = 50/166 (30.12%), Postives = 70/166 (42.17%), Query Frame = 3
Query:  399 VIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCG 896
            V H L+VSLE++Y+G +KK                                MK+S + L P                              G+ +  E K+L + V++G + G KITFP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG
Sbjct:  164 VTHDLRVSLEEIYSGCTKK--------------------------------MKISHKRLNPD-----------------------------GKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCG 268          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLAB (Chaperone protein dnaJ OS=Chlamydophila abortus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.953e-17
Identity = 42/67 (62.69%), Postives = 56/67 (83.58%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGED 269
            YY++LGVSK AS +++KK+YRK A+K HPDK  GD E   +FKE+++AYEVLSDP+KRE YD+YG+D
Sbjct:    3 YYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKD 69          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJB6_XENTR (DnaJ homolog subfamily B member 6 OS=Xenopus tropicalis GN=dnajb6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 8.449e-17
Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 3
Query:   78 KYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDAL 275
            +YY++LGV +NAS +D+KKAYRK A+K HPDK  D       +FKE+A+AYEVLSD +KR+IYD+YG++ L
Sbjct:    3 EYYDVLGVQRNASPEDIKKAYRKLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGL 73          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCPE (Chaperone protein dnaJ OS=Mycoplasma penetrans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 8.449e-17
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 3
Query:   66 SDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI 323
            S    YYE+LGVSK+A+ D +K A+RK A++ HPD+  +P   EKFKE+ QAYEVLSDP+KR  YD++G + + +         DPFDI
Sbjct:    2 SSKRDYYEVLGVSKDATDDQIKSAFRKKAMQYHPDRNKEPDAEEKFKEVNQAYEVLSDPDKRANYDRFGHEGV-DGQFGGGAGFDPFDI 89          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_CUPTR (Chaperone protein dnaJ OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 8.449e-17
Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 263
            YYE+LGV KNAS D++KKAYRK A+K HPD+  D     EKFKE  +AYE+LSDPEK+  YDQYG
Sbjct:    6 YYEVLGVGKNASDDEIKKAYRKLAMKFHPDRNPDSKDAEEKFKEAKEAYEMLSDPEKKAAYDQYG 70          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLA (Chaperone protein dnaJ OS=Lactococcus lactis subsp. lactis GN=dnaJ PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.103e-16
Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 3
Query:   69 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGE 266
            +NT+YYE LGV KNASQD++KKAYRK + K HPD   + G  EK+KE+ +AYE LSD +KR  YDQYGE
Sbjct:    2 NNTEYYERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEEKYKEVQEAYETLSDEQKRAAYDQYGE 70          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJ6B_XENLA (DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-B PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.441e-16
Identity = 40/71 (56.34%), Postives = 56/71 (78.87%), Query Frame = 3
Query:   78 KYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDAL 275
            +YY++LGV +N+S DD+KKAYR+ A+K HPDK  D       +FKE+A+AYEVLSD +KR+IYD+YG++ L
Sbjct:    3 EYYDVLGVQRNSSPDDIKKAYRRLALKWHPDKNPDNKEEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGL 73          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_RHILE (Chaperone protein dnaJ (Fragment) OS=Rhizobium leguminosarum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.441e-16
Identity = 62/234 (26.50%), Postives = 106/234 (45.30%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA-------HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNV-IXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKI 746
            +YE LGV+K+A + +LK A+RK A+K HPDK  D +    KFKE+ +AYE+L DP+KR  YD+YG  A +                 D F+                         D+ + ++++LE+ ++G + ++ +  ++                      QG+G     R         ++  C  C G G+ I   D CP+C G+  + E++ L V +  G+++G +I
Sbjct:    6 FYETLGVAKSADEKELKSAFRKLAMKFHPDKNPDDKDAERKFKEINEAYEMLKDPQKRAAYDRYGHAAFEHGGMGGGGGGFAGGGFSDIFE-DIFGEMMGGGAARQRSSGGRERGADLRYNMEITLEESFSGKTAQIRVPTSITCDVCTGSGAKPGTQPKNCGTCQGTG-----RVRAAQGFFSIERTCPTCHGRGQII--PDPCPKCHGQGRVTEERSLSVNIPAGIEDGTRI 231          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLFF (Chaperone protein dnaJ OS=Chlamydophila felis (strain Fe/C-56) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.882e-16
Identity = 42/67 (62.69%), Postives = 55/67 (82.09%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGED 269
            YY++LGVSK AS +++KKAYRK A+K HPDK  GD E   +FKE+++AYEVLSD +KRE YD+YG+D
Sbjct:    3 YYDVLGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKD 69          
The following BLAST results are available for this feature:
BLAST of DY262670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJB1_HUMAN2.904e-1756.52DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNJB1_BOVIN2.904e-1756.52DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
DNAJ_CHLAB4.953e-1762.69Chaperone protein dnaJ OS=Chlamydophila abortus GN... [more]
DNJB6_XENTR8.449e-1757.75DnaJ homolog subfamily B member 6 OS=Xenopus tropi... [more]
DNAJ_MYCPE8.449e-1749.44Chaperone protein dnaJ OS=Mycoplasma penetrans GN=... [more]
DNAJ_CUPTR8.449e-1764.62Chaperone protein dnaJ OS=Cupriavidus taiwanensis ... [more]
DNAJ_LACLA1.103e-1662.32Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]
DNJ6B_XENLA1.441e-1656.34DnaJ homolog subfamily B member 6-B OS=Xenopus lae... [more]
DNAJ_RHILE1.441e-1626.50Chaperone protein dnaJ (Fragment) OS=Rhizobium leg... [more]
DNAJ_CHLFF1.882e-1662.69Chaperone protein dnaJ OS=Chlamydophila felis (str... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA100CE02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262670 ID=DY262670; Name=DY262670; organism=Citrus clementina; type=EST; length=1249bp
TCTCGCGTCTACTCTGAAGATCTGAAATTTTTTAGTACAAGATGTTCGGA
AGAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAGATTCTCGGAGT
CTCAAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTATAGGAAAGCCG
CCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAGTTTAAAGAG
TTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCGTGAAATATA
TGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGGTGGTGGTGGTG
GTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGTGGCAGCCCA
TTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGGGGAGAGGATGT
AATCCATCCCCTCAAGGTTTCTTTGGAGGATCTCTACAATGGGACATCTA
AGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGTGCAAAGGGAAG
GGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGCCAGGGATCTGG
AATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGATTCAACAAATGC
AGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAATCAATGACAAG
GATCGCTGCCCACAATGTAAGGGTGAGAAGGTCATTCAGGAGAAAAAAGT
CTTGGAGGTTATTGTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGT
TCCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTGACATTGTA
TTTGTTCTACAACAGAAAGAGCACCCGAAATTTAAGCGAAAGGGTGATGA
CCTATTTGTTGAGCACACCCTGTCACTGACAGAAGCTCTCTGTGGCTTTC
ATTTGTAATAACTCATTTGAATGGGCGGCACTCCTCATCAAATCCAACCT
GGGGGAAGTAGTCCAGGCGGACCAATTCAGGCCATAAATGAAGAAAGGAT
GGCCTATGTATCAGAGGGCATTTAATAAAGGGGAAACTGTACTTTCTTTT
CCCTGGTGAATTTCCCTGAATTCCCGGGCCCAAAACCAGGGCAGAAAGCT
GGAAAACCGTACTACCTCCAGGGGACCTCATCCAGCCTCCCCAAATTGGG
GAACGTGATAAAGGGGGAAAAAAACCCCCCTCAGGGAGGGGAAATTTTGG
GGGAGAAAAAGGGCAAGAAGAACAACAAAAACAATCCTCCGGGAGGGAT
back to top