DY262670

Overview
NameDY262670
Unique NameDY262670
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1249
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLCV (Chaperone protein dnaJ OS=Chlamydophila caviae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.882e-16
Identity = 41/67 (61.19%), Postives = 56/67 (83.58%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGED 269
            YY++LGVSK AS +++KK+YRK A+K HPDK  GD E   +FKE+++AYEVLSDP+KRE YD+YG++
Sbjct:    3 YYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKN 69          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJB6_PONAB (DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.458e-16
Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD 320
            YYE+LGV ++AS +D+KKAYRK A+K HPDK  +       KFK++A+AYEVLSD +KR+IYD+YG++ L            PF+
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJB6_MACFA (DnaJ homolog subfamily B member 6 OS=Macaca fascicularis GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.458e-16
Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD 320
            YYE+LGV ++AS +D+KKAYRK A+K HPDK  +       KFK++A+AYEVLSD +KR+IYD+YG++ L            PF+
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJB6_HUMAN (DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 2.458e-16
Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD 320
            YYE+LGV ++AS +D+KKAYRK A+K HPDK  +       KFK++A+AYEVLSD +KR+IYD+YG++ L            PF+
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJB6_BOVIN (DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.458e-16
Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD 320
            YYE+LGV ++AS +D+KKAYRK A+K HPDK  +       KFK++A+AYEVLSD +KR+IYD+YG++ L            PF+
Sbjct:    4 YYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDRYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLC (Chaperone protein dnaJ OS=Lactococcus lactis subsp. cremoris GN=dnaJ PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.458e-16
Identity = 42/69 (60.87%), Postives = 53/69 (76.81%), Query Frame = 3
Query:   69 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGE 266
            +NT+YYE LGV KNASQD++KKAYRK + K HPD   + G  +K+KE+ +AYE LSD +KR  YDQYGE
Sbjct:    2 NNTEYYERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEDKYKEVQEAYETLSDEQKRAAYDQYGE 70          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_RALEJ (Chaperone protein dnaJ OS=Ralstonia eutropha (strain JMP134) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.210e-16
Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 263
            YYE+LGV KNAS D++KKAYRK A+K HPD+  D     EKFKE+ +AYE+LSD EK+  YDQYG
Sbjct:    6 YYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPDSKESEEKFKEVKEAYEMLSDAEKKAAYDQYG 70          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DJB10_MOUSE (DnaJ homolog subfamily B member 10 OS=Mus musculus GN=Dnajb10 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 3.210e-16
Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDAL 275
            YYEIL V ++AS DD+KKAYRK A++ HPDK  D      +KFKE+A+AYEVLSD  KREIYD+YG + L
Sbjct:    4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL 73          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJB6_RAT (DnaJ homolog subfamily B member 6 OS=Rattus norvegicus GN=Dnajb6 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.476e-16
Identity = 40/70 (57.14%), Postives = 55/70 (78.57%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDAL 275
            YYE+LGV ++AS +D+KKAYRK A+K HPDK  +       KFK++A+AYEVLSD +KR+IYD+YG++ L
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKQALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGL 73          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJB6_MOUSE (DnaJ homolog subfamily B member 6 OS=Mus musculus GN=Dnajb6 PE=1 SV=4)

HSP 1 Score: 85.8853 bits (211), Expect = 5.476e-16
Identity = 40/70 (57.14%), Postives = 55/70 (78.57%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDAL 275
            YYE+LGV ++AS +D+KKAYRK A+K HPDK  +       KFK++A+AYEVLSD +KR+IYD+YG++ L
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKQALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGL 73          
The following BLAST results are available for this feature:
BLAST of DY262670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CHLCV1.882e-1661.19Chaperone protein dnaJ OS=Chlamydophila caviae GN=... [more]
DNJB6_PONAB2.458e-1649.41DnaJ homolog subfamily B member 6 OS=Pongo abelii ... [more]
DNJB6_MACFA2.458e-1649.41DnaJ homolog subfamily B member 6 OS=Macaca fascic... [more]
DNJB6_HUMAN2.458e-1649.41DnaJ homolog subfamily B member 6 OS=Homo sapiens ... [more]
DNJB6_BOVIN2.458e-1649.41DnaJ homolog subfamily B member 6 OS=Bos taurus GN... [more]
DNAJ_LACLC2.458e-1660.87Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]
DNAJ_RALEJ3.210e-1663.08Chaperone protein dnaJ OS=Ralstonia eutropha (stra... [more]
DJB10_MOUSE3.210e-1661.43DnaJ homolog subfamily B member 10 OS=Mus musculus... [more]
DNJB6_RAT5.476e-1657.14DnaJ homolog subfamily B member 6 OS=Rattus norveg... [more]
DNJB6_MOUSE5.476e-1657.14DnaJ homolog subfamily B member 6 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CE02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262670 ID=DY262670; Name=DY262670; organism=Citrus clementina; type=EST; length=1249bp
TCTCGCGTCTACTCTGAAGATCTGAAATTTTTTAGTACAAGATGTTCGGA
AGAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAGATTCTCGGAGT
CTCAAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTATAGGAAAGCCG
CCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAGTTTAAAGAG
TTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCGTGAAATATA
TGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGGTGGTGGTGGTG
GTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGTGGCAGCCCA
TTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGGGGAGAGGATGT
AATCCATCCCCTCAAGGTTTCTTTGGAGGATCTCTACAATGGGACATCTA
AGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGTGCAAAGGGAAG
GGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGCCAGGGATCTGG
AATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGATTCAACAAATGC
AGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAATCAATGACAAG
GATCGCTGCCCACAATGTAAGGGTGAGAAGGTCATTCAGGAGAAAAAAGT
CTTGGAGGTTATTGTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGT
TCCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTGACATTGTA
TTTGTTCTACAACAGAAAGAGCACCCGAAATTTAAGCGAAAGGGTGATGA
CCTATTTGTTGAGCACACCCTGTCACTGACAGAAGCTCTCTGTGGCTTTC
ATTTGTAATAACTCATTTGAATGGGCGGCACTCCTCATCAAATCCAACCT
GGGGGAAGTAGTCCAGGCGGACCAATTCAGGCCATAAATGAAGAAAGGAT
GGCCTATGTATCAGAGGGCATTTAATAAAGGGGAAACTGTACTTTCTTTT
CCCTGGTGAATTTCCCTGAATTCCCGGGCCCAAAACCAGGGCAGAAAGCT
GGAAAACCGTACTACCTCCAGGGGACCTCATCCAGCCTCCCCAAATTGGG
GAACGTGATAAAGGGGGAAAAAAACCCCCCTCAGGGAGGGGAAATTTTGG
GGGAGAAAAAGGGCAAGAAGAACAACAAAAACAATCCTCCGGGAGGGAT
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