DY262670

Overview
NameDY262670
Unique NameDY262670
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1249
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCH (Chaperone protein dnaJ OS=Burkholderia cenocepacia (strain HI2424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.718e-15
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 263
            YYE+LGV+KNAS D++KKAYRK A+K HPD+  D     E FKE  +AYE+LSD +KR  YDQYG
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYG 70          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCC (Chaperone protein dnaJ OS=Burkholderia cenocepacia (strain MC0-3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.718e-15
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 263
            YYE+LGV+KNAS D++KKAYRK A+K HPD+  D     E FKE  +AYE+LSD +KR  YDQYG
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYG 70          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCA (Chaperone protein dnaJ OS=Burkholderia cenocepacia (strain AU 1054) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.718e-15
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 263
            YYE+LGV+KNAS D++KKAYRK A+K HPD+  D     E FKE  +AYE+LSD +KR  YDQYG
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYG 70          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_BURA4 (Chaperone protein dnaJ OS=Burkholderia ambifaria (strain MC40-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.718e-15
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 263
            YYE+LGV+KNAS D++KKAYRK A+K HPD+  D     E FKE  +AYE+LSD +KR  YDQYG
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYG 70          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.636e-15
Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYG 263
            YYE+LG+SK+AS D++KKAYRK + + HPD   + G  EKFKE+++AYEVLSD +KR  YDQYG
Sbjct:    6 YYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYDQYG 69          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOSW (Chaperone protein dnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.636e-15
Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYG 263
            YYEILGVSKNA+++++KKAYRK + K HPD   +P   EKFKE+ +AYEVLSD +KR  YDQ+G
Sbjct:    6 YYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFG 69          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTR (Chaperone protein dnaJ OS=Chlamydia trachomatis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.636e-15
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGED 269
            YY ILGV+K A+ +++KKAYRK A+K HPDK  GD E   +FKE+++AYEVL D +KRE YD+YG+D
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKD 69          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTB (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.636e-15
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGED 269
            YY ILGV+K A+ +++KKAYRK A+K HPDK  GD E   +FKE+++AYEVL D +KRE YD+YG+D
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKD 69          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTA (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.636e-15
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGED 269
            YY ILGV+K A+ +++KKAYRK A+K HPDK  GD E   +FKE+++AYEVL D +KRE YD+YG+D
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKD 69          
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLT2 (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.636e-15
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 3
Query:   81 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGED 269
            YY ILGV+K A+ +++KKAYRK A+K HPDK  GD E   +FKE+++AYEVL D +KRE YD+YG+D
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKD 69          
The following BLAST results are available for this feature:
BLAST of DY262670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BURCH2.718e-1561.54Chaperone protein dnaJ OS=Burkholderia cenocepacia... [more]
DNAJ_BURCC2.718e-1561.54Chaperone protein dnaJ OS=Burkholderia cenocepacia... [more]
DNAJ_BURCA2.718e-1561.54Chaperone protein dnaJ OS=Burkholderia cenocepacia... [more]
DNAJ_BURA42.718e-1561.54Chaperone protein dnaJ OS=Burkholderia ambifaria (... [more]
DNAJ_LISW64.636e-1560.94Chaperone protein dnaJ OS=Listeria welshimeri sero... [more]
DNAJ_GEOSW4.636e-1562.50Chaperone protein dnaJ OS=Geobacillus sp. (strain ... [more]
DNAJ_CHLTR4.636e-1559.70Chaperone protein dnaJ OS=Chlamydia trachomatis GN... [more]
DNAJ_CHLTB4.636e-1559.70Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]
DNAJ_CHLTA4.636e-1559.70Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]
DNAJ_CHLT24.636e-1559.70Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CE02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262670 ID=DY262670; Name=DY262670; organism=Citrus clementina; type=EST; length=1249bp
TCTCGCGTCTACTCTGAAGATCTGAAATTTTTTAGTACAAGATGTTCGGA
AGAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAGATTCTCGGAGT
CTCAAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTATAGGAAAGCCG
CCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAGTTTAAAGAG
TTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCGTGAAATATA
TGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGGTGGTGGTGGTG
GTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGTGGCAGCCCA
TTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGGGGAGAGGATGT
AATCCATCCCCTCAAGGTTTCTTTGGAGGATCTCTACAATGGGACATCTA
AGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGTGCAAAGGGAAG
GGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGCCAGGGATCTGG
AATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGATTCAACAAATGC
AGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAATCAATGACAAG
GATCGCTGCCCACAATGTAAGGGTGAGAAGGTCATTCAGGAGAAAAAAGT
CTTGGAGGTTATTGTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGT
TCCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTGACATTGTA
TTTGTTCTACAACAGAAAGAGCACCCGAAATTTAAGCGAAAGGGTGATGA
CCTATTTGTTGAGCACACCCTGTCACTGACAGAAGCTCTCTGTGGCTTTC
ATTTGTAATAACTCATTTGAATGGGCGGCACTCCTCATCAAATCCAACCT
GGGGGAAGTAGTCCAGGCGGACCAATTCAGGCCATAAATGAAGAAAGGAT
GGCCTATGTATCAGAGGGCATTTAATAAAGGGGAAACTGTACTTTCTTTT
CCCTGGTGAATTTCCCTGAATTCCCGGGCCCAAAACCAGGGCAGAAAGCT
GGAAAACCGTACTACCTCCAGGGGACCTCATCCAGCCTCCCCAAATTGGG
GAACGTGATAAAGGGGGAAAAAAACCCCCCTCAGGGAGGGGAAATTTTGG
GGGAGAAAAAGGGCAAGAAGAACAACAAAAACAATCCTCCGGGAGGGAT
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