DY262672

Overview
NameDY262672
Unique NameDY262672
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1349
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP396_ARATH (Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 9.751e-14
Identity = 50/215 (23.26%), Postives = 97/215 (45.12%), Query Frame = 2
Query:  314 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG----SSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFR 943
            +L+    +AG  + A     +M E+G   + +S+N L+         DK   LF+ +  KY + P++++  +++ + C  G    ++ K LE + +                ++  +K GN  +A  +W EM +K V  D   YNV I      G+       + +M   G+ PD  +YN L++  CK    DEA  ++  ++  G + +  +++
Sbjct:  161 HLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTM-NKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYK 374          
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP194_ARATH (Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 9.751e-14
Identity = 52/201 (25.87%), Postives = 97/201 (48.26%), Query Frame = 2
Query:  302 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK-GXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 895
            PY+ N++ S  ++ + D A   +++M  +G     ++   L+ A  R R  ++   +F  +  +    PD + + L +++ C +     AL+LL EM  K G           +    K+GN EEA R+  EM   G+ + V A    + N Y  G +  +  +L + M + GL PD + ++ ++  +CKN  M++A + Y
Sbjct:  205 PYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSR-GAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAAT-SLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403          

HSP 2 Score: 72.0182 bits (175), Expect = 9.126e-12
Identity = 56/275 (20.36%), Postives = 122/275 (44.36%), Query Frame = 2
Query:  122 EFDPDKALEIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI--TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTF 940
            E  P++A++I+  V    A P    ++  L V+   K+        L+   +    +  +QE Y  ++I ++ + G  + A+R  D+M   G P SVI+  +L+    +     K   LF+ + ++  L+PDK+ + ++++  C +   +KA+E    M++             +    K  + E A  ++++  +  +        + +     G  +     +  M   G++P+ + YN +M  +C+ + MD A+ ++  + E G   N  T+
Sbjct:  252 ERKPEEAVKIFRRVMSRGAEPDGLLFS--LAVQAACKTPDLVMALDLLREMRGKLGVPASQETYT-SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE-GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522          
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP102_ARATH (Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 9.751e-14
Identity = 59/249 (23.69%), Postives = 99/249 (39.76%), Query Frame = 2
Query:  308 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN-----------------------------------EMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFRT 946
            L +L+  Y        A+   DQM E+G     I+F  L+          +   L D + ++    P+ ++YG+++   C  G  D A  LLN                                   EMENKG           ++CL       +A RL S+M ++ ++ +V  +N  I      G     ++L DEM    + PD  +Y+ L+  +C ++ +DEAK ++E +    C  N  T+ T
Sbjct:  158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405          

HSP 2 Score: 73.9442 bits (180), Expect = 2.402e-12
Identity = 48/203 (23.65%), Postives = 93/203 (45.81%), Query Frame = 2
Query:  341 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFRT 946
            G  D A    ++M+      +V+ ++ ++ +  + R  D    LF E+  K  + P+ I+Y  L+   C+      A  LL++M  +            ++   K+G   EAE+L+ EM K+ +D D+  Y+  I      D  +  K + + M      P+ ++YN L+  +CK + +DE  +++  + + G   N  T+ T
Sbjct:  239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440          

HSP 3 Score: 68.9366 bits (167), Expect = 7.726e-11
Identity = 55/218 (25.23%), Postives = 97/218 (44.50%), Query Frame = 2
Query:  308 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFRTWNII 958
            LCN  R       +  A R    M E     +V++FNAL+ A  +     +   L+DE+ K+ ++ PD  +Y  L+   C     D+A  +   M +K            +N   K    +E   L+ EM ++G+  +   Y   I   +   D +  + +  +M   G+ P+ ++YN L+   CKN  +++A  V+E L+    S+   T  T+NI+
Sbjct:  305 LCNYER-------WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR---SKMEPTIYTYNIM 511          
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP123_ARATH (Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.273e-13
Identity = 45/198 (22.73%), Postives = 99/198 (50.00%), Query Frame = 2
Query:  317 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 907
            ++ + G+A  F    +  D+M   G   + +++N L+ +  R+    +   +F+++ ++    PD+++Y  L+  H  +G  D A+++   M+  G           +NCL K G+   A RL+ EM  +G   ++  +N+ I  +    + E   +L  +M++AG +PD ++Y+ +M        ++EA+ V+  ++
Sbjct:  365 MVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM-QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQ 561          
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.663e-13
Identity = 59/245 (24.08%), Postives = 108/245 (44.08%), Query Frame = 2
Query:  206 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATT 937
            ++ +R+LA   +   ++ L++  K       E    ++I  Y Q G+ + A+  F ++ E G   SV  +N +L           + +++ ++ K+    P+  +Y +LLK+ C +   D A +LL EM NKG           ++ + + G  +E   L    E       V+ YN  I       D +   EL+ EM + G+ P+ ISY+ L+   C +  ++ A      + + GC  N  T
Sbjct:   80 EVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM-KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPV-----VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYT 318          
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PPR41_ARATH (Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana GN=At1g13630 PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.172e-13
Identity = 72/280 (25.71%), Postives = 121/280 (43.21%), Query Frame = 2
Query:  137 KALEIYSSVSKHYASPVSSRYAQDLTVRRLAK--------SKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP-RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFRT 946
            +ALE+ S ++KH   P S      +T   LAK        S  +  I  +++   +   IT    LC       Q G  D  +     M   G    S+I  + +L    ++   D+   LF+++ K   LSPD ++Y +++   C  G  D AL L +EM +K            L  L ++G   EA  L   +   G  LD+  YN+ I      G  E   EL   + + G+ P   ++N L+  YCK + + EA+K+ + ++  G + +  ++ T
Sbjct:  289 EALELASDMNKHGVEPDS------VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQC----QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 557          
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PPR27_ARATH (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.172e-13
Identity = 54/190 (28.42%), Postives = 94/190 (49.47%), Query Frame = 2
Query:  317 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEK-KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 880
            LI +Y + G  D      ++M+  G    V ++N L+    R+   +    LFD++  K    PD +++ +L++ +C  G S KA  LL EM   G           +    K+GN + A  + ++MEK + + ++VA+YNV +   +  G  E    L++EM + GL P+ I+Y  +     K EM+D+
Sbjct:  407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG--LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV-----KEEMVDQ 589          

HSP 2 Score: 74.3294 bits (181), Expect = 1.839e-12
Identity = 49/200 (24.50%), Postives = 91/200 (45.50%), Query Frame = 2
Query:  314 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 910
            +LI      G    A+   D+M   G   ++I++NAL+    ++ +  +   +F  + K     P    Y +L+ ++C  G  D    L  EME +G           +  L + GN E A++L+ ++  KG+  D+  +++ +      G+  +   L+ EM   GLKP  ++YN +M  YCK   +  A  +   +E+
Sbjct:  336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV-KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533          

HSP 3 Score: 73.559 bits (179), Expect = 3.137e-12
Identity = 74/337 (21.96%), Postives = 131/337 (38.87%), Query Frame = 2
Query:  113 LRSEFDPDKALEIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES----------HKNDPKITQEPYLC-------NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK----------------------------------YNLSPDKISYGLLLKSHCDSGSSDKALE---LLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFRTWNII 958
            + SE DPD  L  YS + K+    VS      L +  LA +KR+S I + ++           H     I+    +C        L+ +Y     F+     F +    G   S +S   L+ A  +      V  ++ E+ ++                                  Y  SP+ +SY  L+  +C  G + K  +   +L EM               ++  +K  N   + +++ EM  + V  +V +YN  I     GG       + D+M  AG++P+ I+YN L+  +CKN+M+ EA  ++  ++  G      T R +N++
Sbjct:   75 ISSELDPDLCLRYYSWLVKNSDISVSLELTFKL-LHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA---VPTTRMYNML 407          

HSP 4 Score: 68.9366 bits (167), Expect = 7.726e-11
Identity = 45/196 (22.96%), Postives = 90/196 (45.92%), Query Frame = 2
Query:  356 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTF 940
            +M+ F +M +     +VIS+N+L+          +   + D++     + P+ I+Y  L+   C +    +AL++   ++ +G           ++   K G  ++   L  EME++G+  DV  YN  I      G+ E  K+L D++   GL PD ++++ LM  YC+     +A  + + + + G      T+
Sbjct:  315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA-GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508          
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP105_ARATH (Pentatricopeptide repeat-containing protein At1g64580 OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.837e-13
Identity = 54/204 (26.47%), Postives = 96/204 (47.06%), Query Frame = 2
Query:  314 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 916
            +LI  +   G    A   FD M   G    V+++N L+    +S+  +    LF E+  +  L  D  +Y  L+  +C +G  + A ++ N M + G           L+CL   G  E+A  +  +++K  +D+D+  YN+ I      D  +LKE   L   +   G+KPD I+Y  +++  C+  +  EA K+   ++E+G
Sbjct:  294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD--KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494          
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP325_ARATH (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 3.705e-13
Identity = 54/212 (25.47%), Postives = 92/212 (43.40%), Query Frame = 2
Query:  308 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTF 940
            L  LI    + G    A+  + Q    G      + NALL     +   D+   +  EI  +     D++SY  L+   C     D+A   L+EM  +G           +  L+     EEA + W + ++ G+  DV  Y+V I      +  E  +E  DEM    ++P+T+ YN L+  YC++  +  A ++ E ++  G S N+ T+
Sbjct:  486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 696          

HSP 2 Score: 72.4034 bits (176), Expect = 6.988e-12
Identity = 57/211 (27.01%), Postives = 96/211 (45.50%), Query Frame = 2
Query:  317 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTF 940
            LI+ Y + G  D+A R   +M  +G   +  SF +++       ++D       E+  + N+SP       L+   C  G   KALEL  +  NKG           L+ L + G  +EA R+  E+  +G  +D  +YN  I+   G   ++L E    +DEM   GLKPD  +Y+ L+        ++EA + ++  + NG   +  T+
Sbjct:  419 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG--KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 626          
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP190_ARATH (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.705e-13
Identity = 50/197 (25.38%), Postives = 94/197 (47.72%), Query Frame = 2
Query:  317 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 904
            LI SYG+AG+   +++ F +M +LG  R++ S+N+L     R   Y      F+++  +  + P + +Y L+L     S   + AL    +M+ +G           +N   +    +EAE+L+ EM+   +   V +Y   I      D  +    + +EMR +G++P+  +Y+ L+   C    M EAK + + +
Sbjct:  191 LIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE-GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386          
The following BLAST results are available for this feature:
BLAST of DY262672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
PP396_ARATH9.751e-1423.26Pentatricopeptide repeat-containing protein At5g24... [more]
PP194_ARATH9.751e-1425.87Pentatricopeptide repeat-containing protein At2g39... [more]
PP102_ARATH9.751e-1423.69Pentatricopeptide repeat-containing protein At1g63... [more]
PP123_ARATH1.273e-1322.73Pentatricopeptide repeat-containing protein At1g74... [more]
PP270_ARATH1.663e-1324.08Pentatricopeptide repeat-containing protein At3g48... [more]
PPR41_ARATH2.172e-1325.71Putative pentatricopeptide repeat-containing prote... [more]
PPR27_ARATH2.172e-1328.42Pentatricopeptide repeat-containing protein At1g09... [more]
PP105_ARATH2.837e-1326.47Pentatricopeptide repeat-containing protein At1g64... [more]
PP325_ARATH3.705e-1325.47Pentatricopeptide repeat-containing protein At4g19... [more]
PP190_ARATH3.705e-1325.38Pentatricopeptide repeat-containing protein At2g37... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CE04RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262672 ID=DY262672; Name=DY262672; organism=Citrus clementina; type=EST; length=1349bp
CTGAAAGGAAATGACCTCTCTCCGCCATATTCGCCGCCTTTGCACCGCCA
CCACCGCCGCCGGCAGCAGTACAACGGCATCCTCAATATCAGTATCCAAA
GCCAAATCGAAGCTTCGTTCAGAATTCGACCCTGACAAAGCCCTAGAAAT
CTACTCGTCCGTTTCCAAACACTACGCGTCTCCAGTCTCCTCTCGCTACG
CCCAAGACTTAACTGTTCGTCGTCTCGCCAAATCTAAGCGTTTCTCCGAC
ATCGAAACCCTAATTGAATCCCACAAAAATGACCCCAAGATCACCCAAGA
ACCTTACTTGTGCAATCTCATTCGATCCTACGGTCAAGCTGGCATGTTTG
ACCACGCCATGAGAACCTTTGACCAAATGGATGAATTGGGCACACCTAGA
TCGGTAATTTCTTTTAATGCCTTGTTATTTGCTTGTACTCGGTCCAGGCT
TTACGATAAAGTTCCTATTTTGTTTGATGAAATTCCAAAAAAATATAATC
TTTCGCCGGATAAGATATCGTATGGCCTTTTGTTAAAATCCCATTGTGAT
TCTGGGTCGTCTGATAAGGCTTTGGAGTTATTGAATGAGATGGAGAATAA
AGGTGTTGAAGTGACCACTGTTACTTACACAACAGTGTTGAATTGTTTAT
ATAAGCAAGGGAATGCTGAAGAGGCTGAGAGATTGTGGAGTGAGATGGAG
AAAAAGGGTGTTGACTTGGATGTTGCGGCTTATAATGTGAGGATCACCAA
TACTTATGGTGGTGATCCTGAGAGATTGAAGGAGTTGATTGATGAGATGC
GTGATGCGGGGTTGAAACCGGACACCATCAGTTATAACTTTCTCATGACT
TGTTATTGTAAAAATGAGATGATGGATGAAGCTAAGAAGGTGTACGAGGG
ATTGGAGGAAAATGGGTGTAGTCAAAATGCTACAACTTTTAGGACTTGGA
ATATCATCTGTGTGGGAAGGGGAAATTTGATAAGGCGTATAAGGGGTTTA
AGGAAATGTGATGTGCATAAAATTCCCGATTTAATACGGGGAAGCTTTTG
GGTGGAAGGTTGGGTGAAGAAAAAAAGAATTAGGGAGGCCAAAGGAGGAT
TTGGAATATTAAAAGAAATTCCCTCCCTAAGGTTTAAAAACTGGGAAAAA
AATTAAGGAGGAAGGGGGGGTGGGTCCTGGCCCCGGGGTTTGGGGGGGGG
TAAAAAACCCGGGGTTTAACCATTGGGGGAAACTCTTGTTTGGGGGGAAA
TAAGGTTTTACCTAATTTTTTGGGTGGTTTATTTTTAATTTTTTTGTAGG
GTGGTGGGGGGGGAGAAACCAATAATATTTTTTTTTTAATTTTAATTAT
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