DY262680

Overview
NameDY262680
Unique NameDY262680
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1144
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262680 vs. ExPASy Swiss-Prot
Match: SCRK1_ORYSJ (Fructokinase-1 OS=Oryza sativa subsp. japonica GN=FRK1 PE=1 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 1.184e-70
Identity = 140/240 (58.33%), Postives = 168/240 (70.00%), Query Frame = 1
Query:  316 SPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT*GEDPYDDAVVYKLFHANLKLLLVHEGPEGCRYYTKD 1035
            S LVV FGEMLIDFVPTV+G+SLAE+                   RLGG +AF+GK+G DEFG MLA IL++N V+  G+ FD GARTALAFVTLR+DGEREFMFYRNPSADMLL  AEL++ LI +A +FHYGSISLI EPC              G +LSYDPNLR  LWPS ++AR  ILSIW+ ADI+K+SE E+ FLT G D  +D VV KL+   +KLLLV  G +GC+YY +D
Sbjct:    5 SELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEFGRMLAAILRDNGVDDGGVVFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTKILSIWDQADIVKVSEVELEFLT-GIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARD 243          
BLAST of DY262680 vs. ExPASy Swiss-Prot
Match: SCRK1_ORYSI (Fructokinase-1 OS=Oryza sativa subsp. indica GN=FRK1 PE=1 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.546e-70
Identity = 140/240 (58.33%), Postives = 168/240 (70.00%), Query Frame = 1
Query:  316 SPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT*GEDPYDDAVVYKLFHANLKLLLVHEGPEGCRYYTKD 1035
            S LVV FGEMLIDFVPTV+G+SLAE+                   RLGG +AF+GK+G DEFG MLA IL++N V+  G+ FD GARTALAFVTLR+DGEREFMFYRNPSADMLL  AEL++ LI +A +FHYGSISLI EPC              G +LSYDPNLR  LWPS ++AR  ILSIW+ ADI+K+SE E+ FLT G D  +D VV KL+   +KLLLV  G +GC+YY +D
Sbjct:    5 SELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEFGRMLAAILRDNGVDDGGVVFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTKILSIWDHADIVKVSEVELEFLT-GIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARD 243          
BLAST of DY262680 vs. ExPASy Swiss-Prot
Match: SCRK1_MAIZE (Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.709e-69
Identity = 138/238 (57.98%), Postives = 166/238 (69.75%), Query Frame = 1
Query:  322 LVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT*GEDPYDDAVVYKLFHANLKLLLVHEGPEGCRYYTKD 1035
            LVV FGEMLIDFVPTV+G+SLAE+                   RLGG +AF+GK+G DEFG MLA IL++N V+  G+ FD GARTALAFVTLR+DGEREFMFYRNPSADMLL   EL++ LI +A +FHYGSISLI EPC              G +LSYDPNLR  LWPS ++AR  ILSIW+ ADI+K+SE E+ FLT G D  +D VV KL+   +KLLLV  G +GC+YY +D
Sbjct:    7 LVVSFGEMLIDFVPTVAGVSLAEAPAFLKAPGGAPANVAIAVSRLGGGAAFVGKLGDDEFGRMLAAILRDNGVDDGGVVFDSGARTALAFVTLRADGEREFMFYRNPSADMLLTADELNVELIKRAAVFHYGSISLIAEPCRTAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTQILSIWDQADIVKVSEVELEFLT-GIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARD 243          
BLAST of DY262680 vs. ExPASy Swiss-Prot
Match: SCRK_SOLTU (Fructokinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 5.147e-66
Identity = 138/239 (57.74%), Postives = 156/239 (65.27%), Query Frame = 1
Query:  316 SPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT*GEDPYDDAVVYKLFHANLKLLLVHEGPEGCRYYTK 1032
            S L+V FGEMLIDFVPTVSG+SLAE+                   RLGG SAF+GK+G DEFG+MLA ILK N V   G+ FD GARTALAFVTLR+DGEREFMFYRNPSADMLL   EL+L LI  AK+FHYGSISLI EPC              G +LSYDPNLRLPLW S  +AR+           IK+S+ E+ FLT G D  DD     L+H NLKLLLV  G +GC YYTK
Sbjct:   10 SGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGKSAFVGKLGDDEFGHMLAGILKTNGVQADGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPDELNLDLIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWSSEAEARKA----------IKVSDVELEFLT-GSDKIDDESAMSLWHPNLKLLLVTLGEKGCNYYTK 237          
BLAST of DY262680 vs. ExPASy Swiss-Prot
Match: YDJE_BACSU (Uncharacterized sugar kinase ydjE OS=Bacillus subtilis GN=ydjE PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.674e-22
Identity = 72/225 (32.00%), Postives = 108/225 (48.00%), Query Frame = 1
Query:  325 VVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGS-ISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPS-----ADKAREGILSIWETADIIKISEEEISFLT*GEDPYDDAVVYKLFHANL 981
            VVC GE+LIDF  T   + L E                    +LGG +AF GKVG D FGY L   L   +V+ + +  D  A T LAFV+L+ +GER+F+F  N  AD L    ++D   + +AKI H+GS  +L+++P               G  +S+DPN R  LW          A++ I      +D +K+S+EE+  ++  +D      +     AN+
Sbjct:    6 VVCIGELLIDFFCTDVDVDLMEGRQFLKSAGGAPANVSAAIAKLGGDAAFSGKVGKDPFGYFLKRTLDAVHVDTSMLVMDEKAPTTLAFVSLKQNGERDFVF--NRGADALFTLEDIDQEKLNEAKILHFGSATALLSDPFCSAYLRLMSIAKDNGQFISFDPNYREDLWRGRVSEFVSVAKKAI----AVSDFVKVSDEELEIISGVKDHEKGVAILHEIGANI 224          
BLAST of DY262680 vs. ExPASy Swiss-Prot
Match: SCRK_KLEPN (Fructokinase OS=Klebsiella pneumoniae GN=scrK PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 8.602e-21
Identity = 68/188 (36.17%), Postives = 88/188 (46.81%), Query Frame = 1
Query:  451 RLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT*GEDPYDDAVVYKLFHANLKLLLVHEGPEG 1014
            RLGG S FIG+VG D FG  +   L +  V+   MR D   RT+   V L S GER F F   PSAD+ LQ    DL      +  H  SI+L  EP               G  +S+DPN+R  LW      R+ +      AD IK+SEEE++F++ G D     +          LLLV +G  G
Sbjct:   40 RLGGDSGFIGRVGDDPFGRFMRHTLAQEQVDVNYMRLDAAQRTSTVVVDLDSHGERTFTFMVRPSADLFLQPE--DLPPFAAGQWLHVCSIALSAEPSRSTTFAALEAIKRAGGYVSFDPNIRSDLWQDPQDLRDCLDRALALADAIKLSEEELAFIS-GSDDIVSGIARLNARFQPTLLLVTQGKAG 224          
BLAST of DY262680 vs. ExPASy Swiss-Prot
Match: SCRK_VIBAL (Fructokinase OS=Vibrio alginolyticus GN=scrK PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.052e-18
Identity = 62/188 (32.98%), Postives = 88/188 (46.81%), Query Frame = 1
Query:  451 RLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT*GEDPYDDAVVYKLFHANLKLLLVHEGPEG 1014
            RL G SAF G+VG D FG  +  IL +  V    +  DP  RT+   V L   GER F F   PSAD  +     D+    +    H  SISL  EP               G  +S+DPNLR  +W    + +  ++     AD++K SEEE+ FLT  +       + ++   N+ L+LV +G +G
Sbjct:   39 RLSGKSAFFGRVGDDPFGRFMQSILDQEGVCTEFLIKDPEQRTSTVVVDLDDQGERSFTFMVKPSADQFMSVE--DMGNFKQGDWLHVCSISLANEPSRSSTFEAIKRAKAAGGFISFDPNLRDEVWQDQSEIQAVVMKAVAMADVVKFSEEELLFLT--DSTSMAQGLQQIAAMNIALVLVTQGAKG 222          
BLAST of DY262680 vs. ExPASy Swiss-Prot
Match: SCRK_ECOLX (Fructokinase OS=Escherichia coli GN=cscK PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 3.060e-18
Identity = 62/188 (32.98%), Postives = 89/188 (47.34%), Query Frame = 1
Query:  451 RLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT*GEDPYDDAVVYKLFHANLKLLLVHEGPEG 1014
            RLGG+S FIG+VG D FG ++   L    V+   ++ D   RT+   V L   GER F F   PSAD+ L+    DL      +  H  SI+L  EP               G  +S+DPN+R  LW      R  +    + AD++K+SEEE   ++ G+   D  +        + +LLV +G EG
Sbjct:   40 RLGGTSGFIGRVGDDPFGALMQRTLLTEGVDITYLKQDEWHRTSTVLVDLNDQGERSFTFMVRPSADLFLETT--DLPCWRHGEWLHLCSIALSAEPSRTSAFTAMTAIRHAGGFVSFDPNIREDLWQDEHLLRLCLRQALQLADVVKLSEEEWRLIS-GKTQNDRDICALAKEYEIAMLLVTKGAEG 224          
BLAST of DY262680 vs. ExPASy Swiss-Prot
Match: SCRK_SALTY (Fructokinase OS=Salmonella typhimurium GN=scrK PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.518e-17
Identity = 65/189 (34.39%), Postives = 89/189 (47.09%), Query Frame = 1
Query:  451 RLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT*GED-PYDDAVVYKLFHANLKLLLVHEGPEG 1014
            RLGG+S FIG VG D FG  +   L++  V+ + M  D   RT+   V L   GER F F   PSAD+ L   E DL      +  H  SI+L  EP               G  +S+DPN+R  LW         +      A+++K+SEEE+ F++   D  Y  A V + +    +LLLV  G  G
Sbjct:   40 RLGGNSGFIGAVGGDPFGRYMRHTLQQEQVDVSHMYLDDQHRTSTVVVDLDDQGERTFTFMVRPSADLFL--VEEDLPQFAAGQWLHVCSIALSAEPSRSTTFAAMESIRSAGGRVSFDPNIRPDLWQDQALLLACLDRALHMANVVKLSEEELVFISSSNDLAYGIASVTERYQP--ELLLVTRGKAG 224          
BLAST of DY262680 vs. ExPASy Swiss-Prot
Match: SCRK_RHILT (Fructokinase OS=Rhizobium leguminosarum bv. trifolii GN=frk PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.602e-13
Identity = 66/241 (27.39%), Postives = 104/241 (43.15%), Query Frame = 1
Query:  322 LVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT*GEDPYDDAVVYKLFHANLKLLLVHEGPEGCRYYTKDSAV 1044
            +++C GE LID +P  + L                        RLG  +AF   +  D  G +L + LK +NV+ +     P   T +AFV L  +G+  + FY   +A  ++  A+L   L    +  H+G+ISLI  PC               V+ S DPN+R             I  +   +DI+K S+E++ +   G     DA+     +   KL+++ +G EG   YTKD  V
Sbjct:    1 MILCCGEALIDMLPRDTTLG---EKGFAPYAGGAIFNTAIALGRLGIPTAFFTGIADDMMGEILLETLKASNVDYSPCAITPRPST-IAFVKL-VNGQATYAFYDEGTAGRMITTADLP-DLGDDCEALHFGAISLIPSPCGETYEALLDREAASRVI-SLDPNIRPGFIKDKPSHMARIKRMAAKSDIVKFSDEDLDWF--GLQGDHDALAAHWLNHGAKLVVITKGAEGASGYTKDRKV 232          
The following BLAST results are available for this feature:
BLAST of DY262680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
SCRK1_ORYSJ1.184e-7058.33Fructokinase-1 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK1_ORYSI1.546e-7058.33Fructokinase-1 OS=Oryza sativa subsp. indica GN=FR... [more]
SCRK1_MAIZE1.709e-6957.98Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1[more]
SCRK_SOLTU5.147e-6657.74Fructokinase OS=Solanum tuberosum PE=2 SV=1[more]
YDJE_BACSU2.674e-2232.00Uncharacterized sugar kinase ydjE OS=Bacillus subt... [more]
SCRK_KLEPN8.602e-2136.17Fructokinase OS=Klebsiella pneumoniae GN=scrK PE=3... [more]
SCRK_VIBAL1.052e-1832.98Fructokinase OS=Vibrio alginolyticus GN=scrK PE=3 ... [more]
SCRK_ECOLX3.060e-1832.98Fructokinase OS=Escherichia coli GN=cscK PE=3 SV=2[more]
SCRK_SALTY1.518e-1734.39Fructokinase OS=Salmonella typhimurium GN=scrK PE=... [more]
SCRK_RHILT6.602e-1327.39Fructokinase OS=Rhizobium leguminosarum bv. trifol... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CE12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262680 ID=DY262680; Name=DY262680; organism=Citrus clementina; type=EST; length=1144bp
CCACCACCACCACCAATCCACTCTAATGCTATTGCCAGCAGAAATCCCCA
CTATTTTATCCGTACATCAATCTTAACGCCTGATCAAATTTCAAAAACCT
TCATCAACCACCAATTAACTCAACGACTAGCTCTTGCTATGGCTCTTCAT
TCTACTGCATTTTGCTTCACTGGTGCTGTTTCTTCTTACTCTCACTCTTC
AGTTAAGCTCGGTACTCACCCAACGATCAAAGCTTCATCTCCGCTTCCTC
GGTTGAATGTTCGAGTGAAAGCACTTCCAGGTGATGGGTTACCTGAAACA
AAGGAAACAAGGGAATCTCCGCTCGTGGTTTGTTTTGGGGAAATGCTGAT
TGATTTTGTTCCAACTGTTAGTGGACTTTCATTGGCTGAGTCGCCAGCTT
TCAAGAAAGCTCCCGGCGGTGCACCTGCTAATGTGGCTGTTGGCATCGCT
CGCCTTGGAGGCTCATCCGCTTTTATTGGGAAGGTTGGTGCAGATGAATT
TGGTTACATGCTTGCTGATATATTGAAGGAGAACAATGTGAATGGTGCTG
GGATGCGCTTTGACCCTGGTGCACGTACGGCTTTAGCATTTGTTACACTA
AGGAGTGATGGGGAACGCGAGTTCATGTTTTACCGTAATCCTAGTGCTGA
TATGTTGCTTCAAGAAGCTGAACTTGATCTCAGTTTAATTACGAAGGCAA
AAATTTTTCATTATGGTTCTATAAGTCTAATTACAGAACCATGTAAGTCA
GCTCACATTGCTGCAGCAAAAGCTGCAAAGGATGCTGGTGTGGTTCTCTC
CTATGACCCCAATCTAAGGCTTCCCCTTTGGCCCTCAGCAGACAAAGCAA
GAGAAGGAATTCTGAGCATTTGGGAGACTGCTGACATTATCAAGATCAGT
GAAGAAGAGATTTCTTTTCTAACCTAAGGAGAGGATCCATATGATGATGC
AGTTGTTTATAAACTATTTCATGCGAATCTTAAATTGCTACTTGTCCACG
AGGGTCCAGAAGGTTGCAGGTACTACACAAAGGATTCAGCGGTAAAATGC
AGGGCTTAAGGGTAAAGGCTGGTGATGCCCCTGGTGGCAGGGAATGCTTT
GTTGCTGGGAAACATCCCAACCTTCCCCTGATTTTCCCCTGCTT
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