DY262682

Overview
NameDY262682
Unique NameDY262682
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1148
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQP9_MOUSE (Aquaporin-9 OS=Mus musculus GN=Aqp9 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.132e-11
Identity = 62/226 (27.43%), Postives = 97/226 (42.92%), Query Frame = 1
Query:  292 IAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKG--------FQKSQYEMLG-GGANMLSKGYSK-----GDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIFLGRTIHW 924
            ++EF+ TF+ + +   ++     S+ K    GI  I   F   +   +Y T G+SGGHINPAV+F +    ++   +  FY+  Q LGA  GAA V G        F   +  + G  G   +   Y K           ++V T  L+  VF+  D    +R+  VP  L P+ IG  + ++  +    +G  +NPAR L   L +     W       G    W
Sbjct:   27 LSEFLGTFIMIVLGCGSIAQAVLSREKAG--GIITINIGFATAVVMALYATFGVSGGHINPAVSFAMCTFGRMEWFKFPFYVGAQLLGAFVGAATVFGIYYDGLMAFADGKLLITGENGTAFIFATYPKPFVSVPGAFVDQVVSTMFLLLIVFAIFD----SRNLGVPRGLEPIVIGLLIIVISCSLGLNSGCAMNPARDLSPRL-FTALAGWGFEVFTFGNNFWW 245          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: GLPF_STRCO (Probable glycerol uptake facilitator protein OS=Streptomyces coelicolor GN=glpF PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 67/240 (27.92%), Postives = 99/240 (41.25%), Query Frame = 1
Query:  292 IAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQY-------EMLGG----------------GANMLSKGYSKG-------DGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIY------NKDQS-WDDHWI 900
            I E + T L + +       V+   SK    G   IA+ +G  +    Y +  +SG H+NPAVT G+ + +    +    Y   Q LGA+ GA +V      Q+       E++GG                GA  +   +S G         L  EI+GTFVL+  + +      N   + + IL  L  GF V  + L+    TG  INP R LG  +++      NK  S W   WI
Sbjct:    8 IGETIGTALLILLGGGVCAAVTLKASKARNAGWLAIAFGWGFAVMTAAYISGPLSGAHLNPAVTVGIAI-KDGDWSNTPTYFAGQLLGAMIGAVLVWVAYYGQFQAHLTDREIVGGPGAQDTTAKSVEAQEKGAGPVLGVFSTGPEIRHTVQNLATEIIGTFVLLLAILT---QGLNDEGNGLGILGALITGFVVVSIGLSLGGPTGYAINPVRDLGPRIVHALLPLPNKGGSDWSYAWI 243          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQP9_HUMAN (Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.636e-11
Identity = 54/210 (25.71%), Postives = 89/210 (42.38%), Query Frame = 1
Query:  274 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGG--------------ANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAL 861
            S  +  ++EF+ TF+ + +    V     S+ +    G+  I   F   +   +Y   G+SGGHINPAV+  + L  ++   +  FY+  Q LGA  GAA V G          GG              A   +   S  +    ++V T +L+  VF+  D++          L P+ IG  + ++  +    +G  +NPAR L   L
Sbjct:   21 SLAKETLSEFLGTFILIVLGCGCVAQAILSRGRFG--GVITINVGFSMAVAMAIYVAGGVSGGHINPAVSLAMCLFGRMKWFKLPFYVGAQFLGAFVGAATVFGIYYDGLMSFAGGKLLIVGENATAHIFATYPAPYLSLANAFADQVVATMILLIIVFAIFDSRNLGAPRG---LEPIAIGLLIIVIASSLGLNSGCAMNPARDLSPRL 225          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.203e-11
Identity = 54/196 (27.55%), Postives = 91/196 (46.43%), Query Frame = 1
Query:  292 IAEFVATFLFLY----ITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALI 864
            IAE + T+  ++    + V+ V+          T+   GI   +G ++  ++Y T  ISG H NPAVT    + R+    +   Y+  Q  G++  +  ++   K   E   G     +   S    L AEI+ +F+L++ +   ATD +       V  LA + +G  + +      PI+G  +NPARSLG AL+
Sbjct:   46 IAEMIGTYFIVFSGCGVVVVNVL-------YGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFG----TTPADSPARALVAEIIISFLLMFVISGVATDNRA------VGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALV 224          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.203e-11
Identity = 60/208 (28.85%), Postives = 96/208 (46.15%), Query Frame = 1
Query:  295 AEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIFLGRT 915
            AEF  TF  ++  + T++   + K   S +GI   A + G  +  LV     ISG H+NPAV+  + +   L     + Y+  Q LG+I  +  VKG     Y  +  G   + K     +    E V TFVL++ + + ATD       + V  L  + +G  + +  L   P TG  +NPAR+LG A+   +   +   W++L  T
Sbjct:   99 AEFFGTFTLIFTVLSTIIMDEQHKGVESLLGI---ATSAGLAVTVLVLSLIHISGCHLNPAVSIAMTVFGHLPPAHLLPYIAAQILGSITASFAVKG----MYHPVNPGIVTVPK-VGTVEAFFLEFVTTFVLLFIITALATD------PNAVKELIAVAVGATIMMNALVAGPSTGASMNPARTLGPAIATGR---YTQIWVYLVAT 289          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: GLPF_BACSU (Glycerol uptake facilitator protein OS=Bacillus subtilis GN=glpF PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 6.203e-11
Identity = 52/197 (26.40%), Postives = 82/197 (41.62%), Query Frame = 1
Query:  298 EFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLG-------AEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIY 867
            E + T L +        GV+  KS     G   + + +G  +    Y   GISG H+NPA+T  L             Y+  Q +GAI GA ++       ++     A  L   +S G  +        +E++GTFVLV  + +         +     L PL +GF +  + ++    TG  INPAR LG  + +
Sbjct:    7 EVIGTMLLIIFGAGVCAGVNLKKSLSFQSGWIVVVFGWGLGVAMAAYAVGGISGAHLNPALTIALAFVGDFPWKEVPVYIAAQMIGAIIGAVIIYLHYLPHWKSTDDPAAKLGV-FSTGPSIPHTFANVLSEVIGTFVLVLGILAI------GANQFTEGLNPLIVGFLIVAIGISLGGTTGYAINPARDLGPRIAH 196          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: NIP21_ARATH (Aquaporin NIP2-1 OS=Arabidopsis thaliana GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 8.101e-11
Identity = 59/218 (27.06%), Postives = 98/218 (44.95%), Query Frame = 1
Query:  262 LSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGA---EIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIFL 906
            L S  F +  +AE V T+   Y+       ++ +      V + GIA  +G +I  LVYC   +S  H NPAVT  L  +++  L +   Y+ +Q +G+   +A ++       ++     ++       G  L A   E + T  L+  V + T  KR   +     L  L IG  V L  +    ++G  +NPARS+G AL++     +   WI+L
Sbjct:   41 LLSVHFLQKLLAELVGTY---YLIFAGCAAIAVNAQHNHVVTLVGIAVVWGIVIMVLVYCLGHLSA-HFNPAVTLALASSQRFPLNQVPAYITVQVIGSTLASATLRLLFDLNNDVCSKKHDVFLGSSPSGSDLQAFVMEFIITGFLMLVVCAVTTTKRTTEE-----LEGLIIGATVTLNVIFAGEVSGASMNPARSIGPALVWG---CYKGIWIYL 246          
The following BLAST results are available for this feature:
BLAST of DY262682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
AQP9_MOUSE2.132e-1127.43Aquaporin-9 OS=Mus musculus GN=Aqp9 PE=2 SV=1[more]
GLPF_STRCO2.784e-1127.92Probable glycerol uptake facilitator protein OS=St... [more]
AQP9_HUMAN3.636e-1125.71Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=1 SV=1[more]
NIP41_ARATH6.203e-1127.55Putative aquaporin NIP4-1 OS=Arabidopsis thaliana ... [more]
NIP32_ORYSJ6.203e-1128.85Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica G... [more]
GLPF_BACSU6.203e-1126.40Glycerol uptake facilitator protein OS=Bacillus su... [more]
NIP21_ARATH8.101e-1127.06Aquaporin NIP2-1 OS=Arabidopsis thaliana GN=NIP2-1... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CF02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262682 ID=DY262682; Name=DY262682; organism=Citrus clementina; type=EST; length=1148bp
CACGTTACAAATACCCCCCGGCTCCCTCACTCTTAAATCGTGAGCCCGTT
GTGCCATTTATTGATTCAATTCACTCCCAAGAAACTTGAACCTATCTTGT
CTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGAGGATGTAAGA
GTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAACCGCGGCTCA
GACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCGCCGCTCTTTG
AGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGGCATTGCGGAG
TTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAACAGTGATGGG
CGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATCCAGGGCATCG
CTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTGCACTGCTGGC
ATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGCTGTTCTTGGC
CCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATAATGCAGTGTT
TAGGGGCCATATGCGGTGCCGCCGTTGTAAAGGGCTTTCAGAAAAGCCAA
TATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCAAAGGCTACAGCAA
GGGAGATGGCCTTGGAGCCGAGATTGTTGGTACCTTTGTTCTTGTTTACA
CTGTCTTCTCGGCCACTGATGCCAAGCGCAATGCCCGCGATTCTCATGTT
CCTATATTGGCACCCCTGCCCATTGGATTTGCTGTGTTTTTGGTGCACTT
GGCAACAATTCCTATCACAGGAACAGGCATTAACCCAGCTAGGAGTCTTG
GCGCAGCTCTGATATACAACAAGGACCAAAGCTGGGATGATCATTGGATT
TTTCTGGGCAGGACCATTCATTGGGAGCAGCGCTTGCAGCTTTATATCAT
CAAATTGTGATCAGGCCCATCCCATTCAATTCCAATGACTAATCATAATT
TCCATTCGTTCATTAATAACCATGGAAGGAATTAATTTGCCACCTGGCCC
TGGGTTTGCCTTTAATTATCCGCCGTAAAAGTTACAACCCTTCGGGGGTT
GGGGGTTTTTGAATTTGGTAAGAAAAAACATGGTCCAGGGCCAAATCC
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