DY262682

Overview
NameDY262682
Unique NameDY262682
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1148
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.050e-30
Identity = 80/211 (37.91%), Postives = 125/211 (59.24%), Query Frame = 1
Query:  274 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            +F++A  AEF+A  +F+ ++V + +    S++    V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I     +W++HWI+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIY 233          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 2.050e-30
Identity = 80/211 (37.91%), Postives = 126/211 (59.72%), Query Frame = 1
Query:  274 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            +F++A  AEF+A  +F+ +++ + +    ++ K   V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G  M+    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I     +W++HWI+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIY 233          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.678e-30
Identity = 80/211 (37.91%), Postives = 125/211 (59.24%), Query Frame = 1
Query:  274 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            +F++A  AEF+A  +F+ ++V + +    S++    V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I     +W++HWI+
Sbjct:   36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIY 236          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.018e-29
Identity = 79/211 (37.44%), Postives = 123/211 (58.29%), Query Frame = 1
Query:  274 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            +F++A  AEF+A  +F+ +++ + +     K     V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I     +W++HWI+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWG-GKENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIY 233          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 5.051e-29
Identity = 78/211 (36.97%), Postives = 124/211 (58.77%), Query Frame = 1
Query:  274 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            +F++A  AEF+A  +F+ +++ + +    ++ K   V +  I+  FG  I  +V C   ISGGHINPAVT  +   R++S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    S G GL  E++ TF LV+T+F++ D+KR    + V     L IG +V + HL  I  TG  +NPARS G A+I     +W++HWI+
Sbjct:   33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIY 233          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 6.734e-28
Identity = 81/216 (37.50%), Postives = 118/216 (54.63%), Query Frame = 1
Query:  259 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKS-KSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            EL S SF+RA +AEF+ + L+      T++G+  S +      G+ G A AFG     LV     +SGGHINPA+T    LA +LSL RA+ Y++ Q LGA+ GA V+ G   +       G + L      G G   E++ T   +  VF++ D + + R    P  A LP+GF++ L HL  IP TG G+NPARS   A+I    +++ +HW+F
Sbjct:    3 ELRSSSFWRAILAEFLGSLLY------TLLGLGASLRWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGT-LGLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVF 204          

HSP 2 Score: 22.3274 bits (46), Expect = 6.734e-28
Identity = 6/15 (40.00%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  902 FWAGPFIGSSACSFI 946
            FWAGP +G++  + +
Sbjct:  204 FWAGPLLGAALAALL 218          

HSP 3 Score: 21.9422 bits (45), Expect = 6.734e-28
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  921 LGAALAALYHQIVIRP 968
            LGAALAAL +++ + P
Sbjct:  210 LGAALAALLYELALCP 225          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.931e-28
Identity = 79/217 (36.41%), Postives = 122/217 (56.22%), Query Frame = 1
Query:  259 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            E+ S +F +A  AEF+AT +F++  + + +     K   +   +  I+ AFG  I  +      +SGGH+NPA+T  L +  ++SL RAVFY++ Q +GAI GAA++ G   + Y        N L+   + G  + AE++ TF L   VFS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A+I ++  S   HW+F
Sbjct:    4 EVCSAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL--APYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSS--AHWVF 206          

HSP 2 Score: 22.3274 bits (46), Expect = 7.931e-28
Identity = 6/15 (40.00%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  902 FWAGPFIGSSACSFI 946
            FW GP +G++  + I
Sbjct:  206 FWVGPIVGAATAAII 220          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.344e-27
Identity = 78/216 (36.11%), Postives = 117/216 (54.17%), Query Frame = 1
Query:  259 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            E+ S +F +A  AEF+AT +F++  + + +     K   +   I  IA AFG  I  L      +SGGHINPA+T  L +  ++SL RAVFY++ Q +GAI GA ++ G             N L+   + G  +  E++ TF L   +FS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N+      HW+F
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARG-NLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVF 206          

HSP 2 Score: 21.557 bits (44), Expect = 1.344e-27
Identity = 5/15 (33.33%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  902 FWAGPFIGSSACSFI 946
            FW GP +G++  + +
Sbjct:  206 FWVGPIVGAAVAAIL 220          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 2.122e-27
Identity = 73/211 (34.60%), Postives = 114/211 (54.03%), Query Frame = 1
Query:  274 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            + +R  +AEF+ TF  + I + + MG     +   T     IA+ FG ++  L      +SG HINPAVT GL +   +S+ +  FY++ QC+GAI GAA++K    S  +++GG G   +    + G G+  E + TF+LV+ V    D +R    S +   APL IG ++   HL+ I  TG  +NPARS G A++     +W D W++
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPTMTQ----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPS--DVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRR----SDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMG---NWTDQWVY 218          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.174e-27
Identity = 76/212 (35.85%), Postives = 116/212 (54.72%), Query Frame = 1
Query:  274 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANM--LSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            + +R   AE + T L + I   +  GV  S+       +  IA  FG +I  +V C   +SG HINPAVT GL +   +S+ +A+FY+I+QC+GAI G+A++K    +++    G   M  L+ G +   G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARS G A+  N D +W +HW++
Sbjct:   24 TIWRCLAAELIGTLLLVLIGTGSCTGVQISEGDV----VVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFR---GTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRR----KNLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVY 222          
The following BLAST results are available for this feature:
BLAST of DY262682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
AQP4_RAT2.050e-3037.91Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_HUMAN2.050e-3037.91Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_NOTAL2.678e-3037.91Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_DIPME1.018e-2937.44Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_BOVIN5.051e-2936.97Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
MIP_CHICK6.734e-2837.50Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP5_SHEEP7.931e-2836.41Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP5_PIG1.344e-2736.11Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP_AEDAE2.122e-2734.60Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP_CICVR6.174e-2735.85Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CF02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262682 ID=DY262682; Name=DY262682; organism=Citrus clementina; type=EST; length=1148bp
CACGTTACAAATACCCCCCGGCTCCCTCACTCTTAAATCGTGAGCCCGTT
GTGCCATTTATTGATTCAATTCACTCCCAAGAAACTTGAACCTATCTTGT
CTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGAGGATGTAAGA
GTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAACCGCGGCTCA
GACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCGCCGCTCTTTG
AGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGGCATTGCGGAG
TTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAACAGTGATGGG
CGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATCCAGGGCATCG
CTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTGCACTGCTGGC
ATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGCTGTTCTTGGC
CCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATAATGCAGTGTT
TAGGGGCCATATGCGGTGCCGCCGTTGTAAAGGGCTTTCAGAAAAGCCAA
TATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCAAAGGCTACAGCAA
GGGAGATGGCCTTGGAGCCGAGATTGTTGGTACCTTTGTTCTTGTTTACA
CTGTCTTCTCGGCCACTGATGCCAAGCGCAATGCCCGCGATTCTCATGTT
CCTATATTGGCACCCCTGCCCATTGGATTTGCTGTGTTTTTGGTGCACTT
GGCAACAATTCCTATCACAGGAACAGGCATTAACCCAGCTAGGAGTCTTG
GCGCAGCTCTGATATACAACAAGGACCAAAGCTGGGATGATCATTGGATT
TTTCTGGGCAGGACCATTCATTGGGAGCAGCGCTTGCAGCTTTATATCAT
CAAATTGTGATCAGGCCCATCCCATTCAATTCCAATGACTAATCATAATT
TCCATTCGTTCATTAATAACCATGGAAGGAATTAATTTGCCACCTGGCCC
TGGGTTTGCCTTTAATTATCCGCCGTAAAAGTTACAACCCTTCGGGGGTT
GGGGGTTTTTGAATTTGGTAAGAAAAAACATGGTCCAGGGCCAAATCC
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