DY262682

Overview
NameDY262682
Unique NameDY262682
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1148
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 9.226e-23
Identity = 77/216 (35.65%), Postives = 112/216 (51.85%), Query Frame = 1
Query:  259 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            EL S SF+RA  AEF AT  +++      +G S   +    + +  +A AFG  +  LV     ISG H+NPAVTF   +  ++SL RA  YM  Q LGA+ GAAV+  +  +   + G  A N L  G S       EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   A++    +++ +HW++
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVY 204          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 9.226e-23
Identity = 62/167 (37.13%), Postives = 92/167 (55.09%), Query Frame = 1
Query:  382 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVV-------KGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAL 861
            +G+ G+A+AFG  +  + +    ISG H+NPAV+FGL +  +      + Y+I Q +GAI  A V+        GF+ S      G A+    GY+ G G  +E+V T + +  +  ATDA+  A        AP+ IG A+ L+HL +IP+T T +NPARS G AL
Sbjct:   35 IGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPAL 195          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.574e-22
Identity = 73/199 (36.68%), Postives = 109/199 (54.77%), Query Frame = 1
Query:  283 RAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVK---GFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAL 861
            +A +AEF++T +F++  V + +  +K    +     G+  +A   G  +F  V   A ISGGH+NPAVTFGL L  ++++   VFY I Q LGAI GA +V+   G     + + G GA          +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L   P +G  +NPARS G A+
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGA---------FEGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAV 205          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.574e-22
Identity = 75/216 (34.72%), Postives = 110/216 (50.93%), Query Frame = 1
Query:  259 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            EL S SF+RA  AEF AT  +++  +      S  +     + +  +A AFG  +  LV     ISG H+NPAVTF   +  ++SL RA  YM  Q LGA+ GAAV+  +  +   + G  A N L    S G     EI  T   V  +F+  D +RN +   V     L +GF++ L HL  +  TG G+NPARS   A++     ++ +HW++
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGL-----GSSLRWAPGPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTG---NFTNHWVY 204          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.218e-22
Identity = 75/223 (33.63%), Postives = 108/223 (48.43%), Query Frame = 1
Query:  253 PGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG---GANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            PGE S     RA  AEF +  +F++    + M   K       +  G+   + +    +F  V   A +SGGH+NPAVTFG F+   ++L RA+ Y I Q LGA+    ++K          GG    A  LS G +  + +  EIV TF LVYTV+ +A D K+      + I+APL IG  V    L      G  +NPA S G A++      W +HW++
Sbjct:   11 PGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLK-------VSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVY 219          

HSP 2 Score: 23.483 bits (49), Expect = 3.218e-22
Identity = 11/30 (36.67%), Postives = 16/30 (53.33%), Query Frame = 2
Query:  902 FWAGPFIGSSACS------FISSNCDQAHP 973
            +W GPFIG++  +      FI SN  +  P
Sbjct:  219 YWVGPFIGAAIAAIVYDTIFIGSNGHEPLP 248          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 3.506e-22
Identity = 71/206 (34.47%), Postives = 110/206 (53.40%), Query Frame = 1
Query:  256 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALI 864
            G+  S +  +A ++EF+AT LF++  V + +  +K  S +     G+  +A A    +F  V   A ISGGH+NPAVT GL +   +++    FY I QCLG+I    ++      +     G    ++ G    +G+  EIV TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A++
Sbjct:   10 GDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHG----VAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 207          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.579e-22
Identity = 66/181 (36.46%), Postives = 97/181 (53.59%), Query Frame = 1
Query:  382 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAV--VKGFQKSQYEMLGGGANMLSK----GYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            +G+ G+++AFG  +  + Y   GISGGH NPAV+ GL +A ++     V Y++ Q  GAI  AAV  V    K+ +++ G  AN   +    GYS    L  E+V T   +  +  +T        S VP+  AP+ IG  + L+HL +IP+T T +NPARS G AL    D +    W+F
Sbjct:   34 IGLLGVSFAFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGST-------HSRVPVGFAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGQALFVG-DWAISQLWLF 206          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 5.448e-22
Identity = 71/219 (32.42%), Postives = 113/219 (51.60%), Query Frame = 1
Query:  256 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            G+  S    +A +AEF+AT LF++  V + +  +K  + +     G+  +A A    +F  V   A ISGGH+NPAVT GL +   +++    FY I Q LG+     ++K         L    + ++ G +   G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A++      +  +WI+
Sbjct:   10 GDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNG----LAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAG---DFSQNWIY 217          

HSP 2 Score: 23.8682 bits (50), Expect = 5.448e-22
Identity = 8/15 (53.33%), Postives = 9/15 (60.00%), Query Frame = 2
Query:  902 FWAGPFIGSSACSFI 946
            +WAGP IG     FI
Sbjct:  217 YWAGPLIGGGLAGFI 231          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 5.980e-22
Identity = 75/232 (32.33%), Postives = 108/232 (46.55%), Query Frame = 1
Query:  286 AGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVG------IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF-----LGRTIHWE--QRLQL 942
            A + EF  TF+FL+   +     +   +  +         +  IA  FG  +   ++C AG+SGG +NPAV+  L LAR +S TR V   + Q +  +            +       AN L  G S+  GL  E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+     LG  + W   Q LQ+
Sbjct:   51 AAVGEFCGTFMFLWCAYVICNVANHDVALVAAPDGSHPGQLIMIAIGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQIVAGMAAGGAASAMTPGEVLF----ANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGSILAWSVWQLLQI 271          
BLAST of DY262682 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.980e-22
Identity = 63/180 (35.00%), Postives = 91/180 (50.56%), Query Frame = 1
Query:  382 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGG------ANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQSWDDHWIF 903
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y + Q LGAI  AA++      +     GG        +   GYS   GL  EI+ T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G AL  ++  +    W+F
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADR-AALSQLWLF 206          
The following BLAST results are available for this feature:
BLAST of DY262682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
MIP_CAVPO9.226e-2335.65Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQPZ_PSEPK9.226e-2337.13Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
TIP22_ORYSJ1.574e-2236.68Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
MIP_HUMAN1.574e-2234.72Lens fiber major intrinsic protein OS=Homo sapiens... [more]
TIP13_ARATH3.218e-2233.63Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIP22_ARATH3.506e-2234.47Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
AQPZ1_RHIME4.579e-2236.46Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
TIP2_TOBAC5.448e-2232.42Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
AQY1_YEAST5.980e-2232.33Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
AQPZ_BRUAB5.980e-2235.00Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CF02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262682 ID=DY262682; Name=DY262682; organism=Citrus clementina; type=EST; length=1148bp
CACGTTACAAATACCCCCCGGCTCCCTCACTCTTAAATCGTGAGCCCGTT
GTGCCATTTATTGATTCAATTCACTCCCAAGAAACTTGAACCTATCTTGT
CTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGAGGATGTAAGA
GTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAACCGCGGCTCA
GACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCGCCGCTCTTTG
AGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGGCATTGCGGAG
TTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAACAGTGATGGG
CGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATCCAGGGCATCG
CTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTGCACTGCTGGC
ATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGCTGTTCTTGGC
CCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATAATGCAGTGTT
TAGGGGCCATATGCGGTGCCGCCGTTGTAAAGGGCTTTCAGAAAAGCCAA
TATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCAAAGGCTACAGCAA
GGGAGATGGCCTTGGAGCCGAGATTGTTGGTACCTTTGTTCTTGTTTACA
CTGTCTTCTCGGCCACTGATGCCAAGCGCAATGCCCGCGATTCTCATGTT
CCTATATTGGCACCCCTGCCCATTGGATTTGCTGTGTTTTTGGTGCACTT
GGCAACAATTCCTATCACAGGAACAGGCATTAACCCAGCTAGGAGTCTTG
GCGCAGCTCTGATATACAACAAGGACCAAAGCTGGGATGATCATTGGATT
TTTCTGGGCAGGACCATTCATTGGGAGCAGCGCTTGCAGCTTTATATCAT
CAAATTGTGATCAGGCCCATCCCATTCAATTCCAATGACTAATCATAATT
TCCATTCGTTCATTAATAACCATGGAAGGAATTAATTTGCCACCTGGCCC
TGGGTTTGCCTTTAATTATCCGCCGTAAAAGTTACAACCCTTCGGGGGTT
GGGGGTTTTTGAATTTGGTAAGAAAAAACATGGTCCAGGGCCAAATCC
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