DY262701

Overview
NameDY262701
Unique NameDY262701
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1283
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262701 vs. ExPASy Swiss-Prot
Match: TMN1_YEAST (Transmembrane 9 superfamily member 1 OS=Saccharomyces cerevisiae GN=EMP70 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 1.884e-35
Identity = 102/359 (28.41%), Postives = 162/359 (45.13%), Query Frame = 1
Query:  130 SFYLPGVAPQDFVKGDELYVKVNKLTSTKT--------------------QLPYSYYSIPYCRPKKIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMILDNLPLVFPIRRLDQESPTVYQLGFHVGL-------------KGQYTGTKD---------------EKYFIHNHLAFTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNTPQEVAENKEIIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRKLYRDLFQYNELETQEELQKKRVGNLFMG-MFQAP 1059
            +FYLPGVAP  + + D + + VN LT +                         Y Y    +C+P+K+    E+LG V+ GDRI NSP+   M + + C  +C+ ++    AK   + I + +  N ++D LP    +    +   + Y  GF++G              KG  T  KD               E  +  NH    ++YH   + +Y R+VG  V+P S+K    G         TC+      +++         + E+ FTY V+F ES   WA+RWD YL + D  I WFS++N  ++V+ LS +V   +LR L  D  +YNEL   ++ Q+     L  G +F++P
Sbjct:   22 AFYLPGVAPTTYRENDNIPLLVNHLTPSMNYQHKDEDGNNVSGDKENFLYSYDYYYNRFHFCQPEKVEKQPESLGSVIFGDRIYNSPFQLNMLQEKECESLCKTVIPGDDAKFINKLIKNGFFQNWLIDGLPAAREVYD-GRTKTSFYGAGFNLGFVQVTQGTDIEATPKGAETTDKDVELETRNDRNMVKTYELPYFANHFDIMIEYHDRGEGNY-RVVGVIVEPVSIKRSSPG---------TCETTGSPLMLDEGN------DNEVYFTYSVKFNESATSWATRWDKYLHVYDPSIQWFSLINFSLVVVLLSSVVIHSLLRALKSDFARYNELNLDDDFQEDSGWKLNHGDVFRSP 363          
BLAST of DY262701 vs. ExPASy Swiss-Prot
Match: YON8_SCHPO (Transmembrane 9 superfamily protein C1105.08 OS=Schizosaccharomyces pombe GN=SPBC1105.08 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.798e-33
Identity = 92/316 (29.11%), Postives = 156/316 (49.37%), Query Frame = 1
Query:  103 VLLLIHGSHSFYLPGVAPQDFVKGDELYVKVNKLTST------KTQLPYSYYS--IPYCRPKKIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMILDNLPLVFPIRRLDQESPTVYQLGFHVGLKGQYTGTKDEKYFIHNHLAFTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNTPQEVAENKE--IIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRKLYRDLFQYNE-LETQEELQK 1017
            V +L+    SF L  ++P+++  G  +   VN ++             Y YY     +CRP+ I   +E+LG VL GDR+ NSP   KM E Q C  +C  I+ +      ++ I   Y VN  +DNLP+   +   + ++ ++   GF +G         ++   + NH    ++YH    +D  R+VG  VKP S          +++ L   +P       +S+ PQ + E  +  ++ +Y V ++ SD  WA+RWD Y+ +   QI W  I++S +I  FL  +V++I+ R L RD+ +YN     QE++Q+
Sbjct:   17 VSVLLQTCFSFQLTPLSPKNYPPGASIDTTVNTISPFIGDGRGSDIFNYEYYDERFHFCRPENIAKQSESLGSVLFGDRLYNSPIEIKMLENQDCVPLCASIIPSSDVSFIRDLISKNYVVNWNIDNLPVATYLEGTNSKNYSL-SPGFPLG------KNTEKGVILFNHYDIVIEYH-TTSSDQHRVVGAYVKPVS----------KESTLVDGNP----VCSSSSNPQYLPEGADLTLVTSYSVSWKYSDTPWATRWDKYMHIESRQIRWIFIIHSAIIDTFLIFVVSIILYRTLNRDINKYNSAFVDQEDVQE 310          

HSP 2 Score: 33.8834 bits (76), Expect = 1.798e-33
Identity = 20/53 (37.74%), Postives = 29/53 (54.72%), Query Frame = 3
Query: 1014 EKTGWKLVHGDVSGPP----LIRINPGSCSKWGFVFWKDVGSIIFALLGFPSP 1160
            E  GWKLVHGDV  PP    L  I  G+ ++   + +   G ++FA+ G  +P
Sbjct:  310 EDFGWKLVHGDVFRPPRRPMLFSILLGTGAQ---LLFMSSGIVLFAIFGIVAP 359          
BLAST of DY262701 vs. ExPASy Swiss-Prot
Match: TMN2_YEAST (Transmembrane 9 superfamily member 2 OS=Saccharomyces cerevisiae GN=TMN2 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 6.701e-33
Identity = 108/369 (29.27%), Postives = 159/369 (43.09%), Query Frame = 1
Query:  133 FYLPGVAPQDFVKGDELYVKVNKLTST----------------KTQLPYSY----YSIPYCRPKKIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMILDNLPLVFPIRRLDQESPT-VYQLGFHVG--------------------------------------LKGQYTGTKDEKYFIHNHLAFTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNTPQEVAENKEIIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRKLYRDLFQYNELETQEELQKKRVGNLFMG-MFQAP 1059
            F LPG++P  +  GDE+ + VN+LT +                K    YSY        +CRP+ +    E+LG V+ GDRI NSP+   M E + C  +C+  +  K AK     I   +  N ++D LP     +  D  + T  Y  GF +G                                      +K     T +  YF+ NH    V++H D   D  R+VG  V P S++    G          C    K  +++ +      ++ E+ FTY V+F  SD  WA+RWD YL + D QI WFS++N  +IV+ LS +V   +LR L  DL +YNEL    E  +     L  G +F+ P
Sbjct:   19 FSLPGLSPTTYHSGDEIPLLVNRLTPSIYFQHQDEEGNDVSGDKEHFLYSYDYYNKRFHFCRPEHVEKQPESLGSVIFGDRIYNSPFQLNMLEEKECVALCKSTIPGKDAKFINTLIKSGFFQNWLVDGLPAA--RKAYDSRTKTNYYGTGFELGFTDVKQTVDGKAVPSTMEELTSEASNEDVILDARLPKNVKPNLVKTVELPYFV-NHFDIEVEFH-DRGNDNYRVVGVIVNPVSIERSSPG---------ACSTTGKPLILDED------KDNEVYFTYSVKFVASDTVWATRWDKYLHIYDPQIQWFSLINFSVIVILLSSVVMHSLLRALKSDLARYNELNLDNEFHEDSGWKLGHGDVFRTP 368          
BLAST of DY262701 vs. ExPASy Swiss-Prot
Match: TMN3_YEAST (Transmembrane 9 superfamily member 3 OS=Saccharomyces cerevisiae GN=TMN3 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.036e-25
Identity = 92/314 (29.30%), Postives = 149/314 (47.45%), Query Frame = 1
Query:  148 VAPQDFVKGDELYVKVNKLTSTKTQLPYSYYSIPYCRPKKIVDSA--ENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMILDN-LPLVFP-IRRLDQESPTVYQLGFHVGLKGQYTGTKDEKYFIHNHLAFTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNTPQEVAENKEIIFTYDVEFQES-DVKWASRWDAYL---LMSDD---QIHWFSIVNSLMIVLFLSGMVAMIMLRKLYRD---------LFQYNELETQEELQKKRVG 1029
            + P  + KGD L + VNK+ S  TQLPY+YY +P+  P  +       +L E++RGDR   S Y  K  E   C  +C      +  +   + + + Y V  ++D+ LP     I   D +    Y  GF +G    +     +K ++HNH+   +++H     D   IVGFEV P SV  +Y      K        + ++ +V    P++  E   + FTY V ++E  +V W  RWD +L    +SD+   Q HW S+ NS+ IVL +S +  +I +R +Y D         +     +ET+++L   + G
Sbjct:   52 ITPNFYRKGDPLELIVNKVESDLTQLPYAYYDLPFTCPPTMHKKPLHLSLNEIIRGDRKWESDYKLKFGEDNPCETLCARKTTKEGMQTLDKLVREGYVVQWLIDDELPAATTFISTTDHKK--YYASGFPLG----FIDPDTDKTYLHNHVMLVIRFHAS-DNDKNTIVGFEVYPRSVS-DYHCPGASKN-------YEQYEIV---IPEDENELTYLPFTYSVYWREEFEVDWNHRWDYFLNAGELSDEQSIQFHWMSLANSVGIVLSISFITLIIYVRVMYTDKSNSKSPKYMINIEGIETEDDLDDDKYG 347          
BLAST of DY262701 vs. ExPASy Swiss-Prot
Match: TM9S1_MOUSE (Transmembrane 9 superfamily member 1 OS=Mus musculus GN=Tm9sf1 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 7.543e-20
Identity = 79/303 (26.07%), Postives = 138/303 (45.54%), Query Frame = 1
Query:  100 VVLLLIHGSHSFYLPGVAPQDFVKGDELYVKVNKLTSTKT-QLPYSYYSIPYCRPKKIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMILDNLPLVFPIRRLDQES--PTVYQLGFHVGLKGQYTGTKDEKYFIHNHLAFTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNTPQEVAENKEIIFTYDVEFQESDVKWASRW----DAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRKLYRDLFQYN 987
            V++LL+   H  ++ GV    +  GD + + VNK+      Q  Y YY +P C P+KI   + +LGEVL GDR+  S Y  + RE     ++C + L +   +  ++ I++ Y    ++D+LP+   +  +++    P  +++G                  +  HL F +++H D +  +A +   +VKP    H  +G  ++                         E   +  TY V + E+ V+  S      D        +IHW SI+NS+++V  L G VA+I++R L  DL +YN
Sbjct:   17 VLILLLGIGHGPWVEGVT--HYKPGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIG------------------LWTHLDFHLEFHGD-RIIFANVSVRDVKP----HSLDGLRSD-------------------------ELLGLTHTYSVRWSETSVEHRSDRRRGDDGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYN 269          

HSP 2 Score: 22.3274 bits (46), Expect = 7.543e-20
Identity = 19/55 (34.55%), Postives = 25/55 (45.45%), Query Frame = 3
Query: 1002 GGASEK-----TGWKLVHGDVSGPPLIRINPGSCSKWGFVFWK-DVGSIIFALLG 1148
            GG+S+       GWK++H DV   P  R    +    G  F     G I+ ALLG
Sbjct:  277 GGSSDDFDQGDNGWKIIHTDVFRFPPYRGLLCAVLGVGAQFLALGTGIIVMALLG 331          
BLAST of DY262701 vs. ExPASy Swiss-Prot
Match: TM9S1_RAT (Transmembrane 9 superfamily member 1 OS=Rattus norvegicus GN=Tm9sf1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.159e-19
Identity = 79/303 (26.07%), Postives = 137/303 (45.21%), Query Frame = 1
Query:  100 VVLLLIHGSHSFYLPGVAPQDFVKGDELYVKVNKLTSTKT-QLPYSYYSIPYCRPKKIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMILDNLPLVFPIRRLDQES--PTVYQLGFHVGLKGQYTGTKDEKYFIHNHLAFTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNTPQEVAENKEIIFTYDVEFQESDVKWASRW----DAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRKLYRDLFQYN 987
            V++LL+   H   + GV    +  GD + + VNK+      Q  Y YY +P C P+KI   + +LGEVL GDR+  S Y  + RE     ++C + L +   +  ++ I++ Y    ++D+LP+   +  +++    P  +++G                  +  HL F +++H D +  +A +   +VKP    H  +G  ++                         E   +  TY V + E+ V+  S      D        +IHW SI+NS+++V  L G VA+I++R L  DL +YN
Sbjct:   17 VLILLLGIGHGPRVEGVT--HYKPGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIG------------------LWTHLDFHLEFHGD-RIIFANVSVRDVKP----HSLDGLRSD-------------------------ELLGLTHTYSVRWSETSVEHRSDRRRADDGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYN 269          

HSP 2 Score: 22.3274 bits (46), Expect = 2.159e-19
Identity = 19/55 (34.55%), Postives = 25/55 (45.45%), Query Frame = 3
Query: 1002 GGASEK-----TGWKLVHGDVSGPPLIRINPGSCSKWGFVFWK-DVGSIIFALLG 1148
            GG+S+       GWK++H DV   P  R    +    G  F     G I+ ALLG
Sbjct:  277 GGSSDDFDQGDNGWKIIHTDVFRFPPCRGLLCAVLGVGAQFLALGTGIIVMALLG 331          
BLAST of DY262701 vs. ExPASy Swiss-Prot
Match: TM9S1_HUMAN (Transmembrane 9 superfamily member 1 OS=Homo sapiens GN=TM9SF1 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.806e-19
Identity = 81/303 (26.73%), Postives = 136/303 (44.88%), Query Frame = 1
Query:  100 VVLLLIHGSHSFYLPGVAPQDFVKGDELYVKVNKLTSTKT-QLPYSYYSIPYCRPKKIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMILDNLPLVFPIRRLDQES--PTVYQLGFHVGLKGQYTGTKDEKYFIHNHLAFTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNTPQEVAENKEIIFTYDVEFQESDVKWASRW----DAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRKLYRDLFQYN 987
            +++LL+   H   + GV    +  GD + + VNK+      Q  Y YY +P C P+KI   + +LGEVL GDR+  S Y  + RE     ++C + L +   +  ++ I++ Y    ++D+LP+   +  +++    P  +++G                  +  HL F +++H D      RI+   V    VK                 PHS    ++   P E      +  TY V + E+ V+  S      D        +IHW SI+NS+++V  L G VA+I++R L  DL +YN
Sbjct:   17 ILILLLGTGHGPGVEGVT--HYKAGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIG------------------LWTHLDFHLEFHGD------RIIFANVSVRDVK-----------------PHS----LDGLRPDEFLG---LTHTYSVRWSETSVERRSDRRRGDDGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYN 269          

HSP 2 Score: 21.557 bits (44), Expect = 2.806e-19
Identity = 16/43 (37.21%), Postives = 20/43 (46.51%), Query Frame = 3
Query: 1023 GWKLVHGDVSGPPLIRINPGSCSKWGFVFWK-DVGSIIFALLG 1148
            GWK++H DV   P  R    +    G  F     G I+ ALLG
Sbjct:  289 GWKIIHTDVFRFPPYRGLLCAVLGVGAQFLALGTGIIVMALLG 331          
BLAST of DY262701 vs. ExPASy Swiss-Prot
Match: TM9S3_MOUSE (Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.808e-19
Identity = 71/270 (26.30%), Postives = 117/270 (43.33%), Query Frame = 1
Query:  220 QLPYSYYSIPYC--RPKKIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMILDNLPLVFPIRRLDQESPTVYQLGFHVGLKGQYTGTKDEKYFIHNHLAFTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNTPQEVAENKEIIFTYDVEFQESDVKWASRWDAYLLMS--DDQIHWFSIVNSLMIVLFLSGMVAMIMLRKLYRDLFQYNELETQEELQK 1017
            Q  Y Y+S+P+C    K I    E LGE L+G  +E S    K ++  M    C + LD +   AF   I + Y   M +D+LP+   +   D+                       E Y++  +    + ++                         GN      LT            S    ++  N +I  +Y V++++SDVK+  R+D YL  S    +IHWFSI NS M+V+FL G+V+MI++R L +D  +Y++ E  +++ +
Sbjct:   53 QETYKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFKDDVMPGTYCEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIWGIVGEADENG---------------------EDYYLWTYKKLEIGFN-------------------------GNRIVDVNLT------------SEGKVKLVPNTKIQMSYSVKWKKSDVKFEDRFDKYLDPSFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDR 264          

HSP 2 Score: 25.0238 bits (53), Expect = 2.808e-19
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 3
Query: 1014 EKTGWKLVHGDVSGP---PLI 1067
            ++ GWK VHGDV  P   PLI
Sbjct:  268 DEYGWKQVHGDVFRPSSHPLI 288          
BLAST of DY262701 vs. ExPASy Swiss-Prot
Match: TM9S1_BOVIN (Transmembrane 9 superfamily member 1 OS=Bos taurus GN=TM9SF1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.745e-19
Identity = 85/304 (27.96%), Postives = 136/304 (44.74%), Query Frame = 1
Query:  100 VVLLLIHGSHSFYLPGVAPQDFVK-GDELYVKVNKLTSTKT-QLPYSYYSIPYCRPKKIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMILDNLPLVFPIRRLDQES--PTVYQLGFHVGLKGQYTGTKDEKYFIHNHLAFTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNTPQEVAENKEIIFTYDVEFQESDVKWASRW----DAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRKLYRDLFQYN 987
            ++LLL+ G      PGV      K GD + + VNK+      Q  Y YY +P C P+KI   + +LGEVL GDR+  S Y  + RE     V+C + L +   +  ++ I++ Y    ++D+LP+   +  +++    P  +++G                  +  HL F +++H D      RI+   V    VK                 PHS    ++   P E      +  TY V + E+ V+  S      D        +IHW SI+NS+++V  L G VA+I++R L  DL +YN
Sbjct:   18 LLLLLLTGRE----PGVEGVTHYKAGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRVLCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIG------------------LWTHLDFHLEFHGD------RIIFANVSVRDVK-----------------PHS----LDGLRPDEFLG---LTHTYSVRWSETSVERRSDRRRGDDGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYN 269          

HSP 2 Score: 21.557 bits (44), Expect = 4.745e-19
Identity = 16/43 (37.21%), Postives = 20/43 (46.51%), Query Frame = 3
Query: 1023 GWKLVHGDVSGPPLIRINPGSCSKWGFVFWK-DVGSIIFALLG 1148
            GWK++H DV   P  R    +    G  F     G I+ ALLG
Sbjct:  289 GWKIIHTDVFRFPPYRGLLCAVLGVGAQFLALGTGIIVMALLG 331          
BLAST of DY262701 vs. ExPASy Swiss-Prot
Match: TM9S3_HUMAN (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.748e-19
Identity = 71/270 (26.30%), Postives = 117/270 (43.33%), Query Frame = 1
Query:  220 QLPYSYYSIPYC--RPKKIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMILDNLPLVFPIRRLDQESPTVYQLGFHVGLKGQYTGTKDEKYFIHNHLAFTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNTPQEVAENKEIIFTYDVEFQESDVKWASRWDAYLLMS--DDQIHWFSIVNSLMIVLFLSGMVAMIMLRKLYRDLFQYNELETQEELQK 1017
            Q  Y Y+S+P+C    K I    E LGE L+G  +E S    K ++  M    C + LD +   AF   I + Y   M +D+LP+   +   D+                       E Y++  +    + ++                         GN      LT            S    ++  N +I  +Y V++++SDVK+  R+D YL  S    +IHWFSI NS M+V+FL G+V+MI++R L +D  +Y++ E  +++ +
Sbjct:   55 QETYKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFKDDVMPATYCEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIWGIVGEADENG---------------------EDYYLWTYKKLEIGFN-------------------------GNRIVDVNLT------------SEGKVKLVPNTKIQMSYSVKWKKSDVKFEDRFDKYLDPSFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDR 266          

HSP 2 Score: 25.0238 bits (53), Expect = 4.748e-19
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 3
Query: 1014 EKTGWKLVHGDVSGP---PLI 1067
            ++ GWK VHGDV  P   PLI
Sbjct:  270 DEYGWKQVHGDVFRPSSHPLI 290          
The following BLAST results are available for this feature:
BLAST of DY262701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
TMN1_YEAST1.884e-3528.41Transmembrane 9 superfamily member 1 OS=Saccharomy... [more]
YON8_SCHPO1.798e-3329.11Transmembrane 9 superfamily protein C1105.08 OS=Sc... [more]
TMN2_YEAST6.701e-3329.27Transmembrane 9 superfamily member 2 OS=Saccharomy... [more]
TMN3_YEAST1.036e-2529.30Transmembrane 9 superfamily member 3 OS=Saccharomy... [more]
TM9S1_MOUSE7.543e-2026.07Transmembrane 9 superfamily member 1 OS=Mus muscul... [more]
TM9S1_RAT2.159e-1926.07Transmembrane 9 superfamily member 1 OS=Rattus nor... [more]
TM9S1_HUMAN2.806e-1926.73Transmembrane 9 superfamily member 1 OS=Homo sapie... [more]
TM9S3_MOUSE2.808e-1926.30Transmembrane 9 superfamily member 3 OS=Mus muscul... [more]
TM9S1_BOVIN4.745e-1927.96Transmembrane 9 superfamily member 1 OS=Bos taurus... [more]
TM9S3_HUMAN4.748e-1926.30Transmembrane 9 superfamily member 3 OS=Homo sapie... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA100CG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262701 ID=DY262701; Name=DY262701; organism=Citrus clementina; type=EST; length=1283bp
AGAGAGAGAGAGGGAGAGAGAGTCTCTTCTCTGAAAAAAAACACAAAAAT
GAAATCTCGAACGAGATCCACGTCGGCGACGACGGCGATCGTGACTTTCG
TTGTTCTCCTTCTGATCCACGGCTCCCACTCTTTCTACCTCCCCGGCGTC
GCTCCTCAGGACTTCGTGAAGGGAGATGAATTGTATGTGAAAGTCAACAA
ATTGACCTCTACGAAGACACAGCTTCCTTACTCGTATTACTCTATTCCAT
ACTGTCGACCAAAGAAAATCGTGGACAGTGCAGAGAACCTTGGAGAAGTG
CTTCGTGGTGACCGCATTGAAAACTCCCCTTATGTGTTTAAAATGAGGGA
ACCTCAAATGTGCAATGTTATTTGTCGGCTTATCCTTGACGCTAAAACTG
CAAAGGCATTCAAGGAAAAGATTGATGACGAATATCGGGTTAACATGATT
CTCGATAATCTTCCCCTCGTTTTTCCCATTAGAAGGTTGGATCAGGAATC
TCCTACTGTTTATCAGCTTGGCTTTCATGTTGGCCTGAAAGGCCAATATA
CGGGGACCAAGGATGAAAAGTATTTTATCCACAATCATTTGGCATTTACT
GTCAAGTATCATAGGGACATCCAAACAGATTATGCAAGAATTGTGGGATT
TGAAGTCAAACCATTCAGTGTGAAACATGAATATGAAGGGAACTGGAATG
AGAAGACTCGTTTAACAACCTGTGACCCCCATTCAAAACACACCGTTGTT
AATTCCAATACTCCGCAAGAAGTTGCAGAGAACAAAGAAATCATATTCAC
ATATGATGTTGAGTTCCAGGAGAGTGATGTGAAGTGGGCTTCTAGATGGG
ATGCATATCTTTTAATGAGCGACGATCAAATACACTGGTTCTCCATTGTC
AATTCATTGATGATTGTTCTCTTCTTGTCGGGCATGGTAGCAATGATAAT
GCTGCGGAAACTTTATCGTGACCTTTTCCAGTACAATGAACTTGAAACCC
AGGAGGAGCTTCAGAAAAAACGGGTTGGAAACTTGTTCATGGGGATGTTT
CAGGCCCCCCATTAATTCGGATCAACCCTGGGTCTTGTTCGAAATGGGGG
TTCGTTTTTTGGAAAGATGTTGGTTCCATAATTTTTGCCCTTCTGGGGTT
CCCCTCCCCCTTTCAAACCCGGGGGGGGGCTTAAGAAGGGGCCTGCCCCC
CCTTTCCGGGGCCCTTTCTGGGGGTTCTTTTTTTGGGGGGTTTGCGCCCC
CCTGCCCCCCCCGGTGAAAAAAAGGTTTGTTTT
back to top