DY262705

Overview
NameDY262705
Unique NameDY262705
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1178
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: HSV2_PICAN (SVP1-like protein 2 OS=Pichia angusta GN=HSV2 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.601e-31
Identity = 86/251 (34.26%), Postives = 131/251 (52.19%), Query Frame = 2
Query:  356 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDL-KLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRI-----EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRVKI 1087
            E  +++ ++NQD  CFA     GF++YN +P +   +R   + GG  ++ ML R N +ALVG G   ++P  K+ IWDD + +      F S + +V LSR  IVVVL++K+ +++F    KLL Q ET  N  G+  LS +  TS LA PG   GQ+++      H   N+I +I AH S I C                GT+IRI +T   +   ++ +G+D+  +TS   SP    LA   DK  + +
Sbjct:   14 EPAVLNAAFNQDQTCFAVCHESGFQVYNTDPMELRMKRTFSTNGGVGLIAMLHRTNYVALVGGGRQPRFPVNKLCIWDDLKKKPSIMLEFMSPILNVLLSRILIVVVLKNKVLIHAFESKPKLLAQHETYDNEAGVAELSVNEQTSFLAFPGRAIGQIQLVDVSPAHRDRNLISIIKAHKSRIQCLAISNSGLLIASASQTGTIIRIHDTAKCSLRFELRRGLDRATVTSIKFSPDDSKLAVLSDKNTLHV 264          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: WIPI4_DANRE (WD repeat domain phosphoinositide-interacting protein 4 OS=Danio rerio GN=wdr45 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 7.315e-31
Identity = 84/253 (33.20%), Postives = 126/253 (49.80%), Query Frame = 2
Query:  371 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQS------RCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKL-LHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRIEHF-----GLNMIKL-INAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRVKI 1087
            S+ +NQD  CF      G RIYN EP  E    D +  G   +  ML R N+LA+VG G N ++    V+IWDD +       + + EF F   V +V++  D+I+++L+++IYVYSF D  + L + +T  NP+GLC L       +L  PG + G +++        G +     INAH S IAC               +GTLIR+F+T    +L ++ +G D   +     S    +L  + DKG V I
Sbjct:    9 SLQFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSIALCSMLHRSNLLAVVGGGVNPKFSEISVLIWDDAREVRDPKDKLVLEFTFTKPVLAVRMRHDKIIIILKNRIYVYSFPDNPVKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLSNTKPGTSSAPFTINAHQSEIACLALNQPGSVVASASRKGTLIRLFDTTTRDKLVELRRGTDPATLYCINFSHDSSFLCASSDKGTVHI 261          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: HSV2_YARLI (SVP1-like protein 2 OS=Yarrowia lipolytica GN=HSV2 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.630e-30
Identity = 77/250 (30.80%), Postives = 130/250 (52.00%), Query Frame = 2
Query:  344 SDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVD-LKLLHQIETLANPRGLCCLSHHSSTSVLACPG-LQRGQVRIEHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRVKI 1087
            + +++  +++ ++NQD  CFA   + GFR+Y  +P     +R+   GG  +++ML R N LA+VG G N ++P  K++IWDD +S+      F S V +V LSR +IVVVL++K++VY+F      +   +T  NP G+   S  +       PG +Q   +  E    N++ +I AH S + C                GTL+R+ +T     L +  +G+D+  + + A SP+   LA   DK  + +
Sbjct:   10 ASMEDQPILNAAFNQDSACFAICHNRGFRVYVTDPMDLRVQREFDDGGIGVIQMLHRTNYLAVVGGGSNPKFPQNKLVIWDDLKSKPALSLEFLSPVLNVLLSRTKIVVVLQNKVHVYAFSSPPSRISTTDTADNPHGIAAFSGDTVVFPSRTPGQIQVVDLSQEGQARNLVSIIRAHKSPVRCVTLSADGSVVASCSDNGTLVRLHSTSNTALLHEFRRGLDRAVVYNMAFSPSGSRLAVLSDKNTMHV 259          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_PICAN (Autophagy-related protein 18 OS=Pichia angusta GN=ATG18 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.780e-30
Identity = 82/242 (33.88%), Postives = 124/242 (51.24%), Query Frame = 2
Query:  377 SWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR--------------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSP 1039
            ++NQD+ C + G S G++IYNCEPF + + +    G   IVEMLF  ++LA+VG G+     P ++ I +  +   I E  F   + +VKL+R+R+VV+LE  IY+Y   +++LLH IET +NP GL  LS  S  + LA P  Q+                    G V I +   L    +I AH + +A                +GT+IR+F+   G +L +  +G   T+I S A SP
Sbjct:   38 NFNQDFSCVSVGYSNGYKIYNCEPFGQCYSKS--DGSIGIVEMLFSSSLLAIVGMGEQHSLSPRRLKIINTKRQTTICELTFPGAILAVKLNRERLVVLLEETIYIYDINNMRLLHTIETPSNPNGLIALSPSSENNYLAYPSPQKLAPNPQTEVTLHSNPQTVRNGDVIIFDAKTLQPTSVIEAHRTSLAAIALSKDGLLLATASDKGTIIRVFSVATGIKLYQFRRGTYPTKIYSLAFSP 277          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: HSV2_SCHPO (SVP1-like protein 2 OS=Schizosaccharomyces pombe GN=hsv2 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.056e-29
Identity = 77/247 (31.17%), Postives = 122/247 (49.39%), Query Frame = 2
Query:  371 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSF-VDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRI-----EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRVKISS 1093
            +VS NQD  C +     G++I+   P K   +R    GG  IV+MLFR N+L LVG G N +Y P K+I+WDD + R + E     +++ +      + +    K+++Y F  +LKL   ++T  NP+GLC +      + +  P  + GQ++I     +H   +   ++ AHDS I+C                GTLIRI+N+  G ++ +  +G   T +   A SP    LA A  K  + I S
Sbjct:    6 TVSLNQDASCMSVALDTGYKIFQINPLKLRAQRQFNDGGLSIVKMLFRSNVLLLVGGGGNPKYAPNKLIVWDDVKERPVKELELNFEIKGICFDGKLLAIATASKLFLYQFGNNLKLQRCLDT-QNPKGLCAMVTTVEKTAIVFPSRKVGQLQILFLFKDHMNTS---IVPAHDSEISCLGISKTGSKIASSSTNGTLIRIWNSETGEKICEFRRGYQHTAVCQLAFSPDELLLACASKKETLHIFS 248          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_YARLI (Autophagy-related protein 18 OS=Yarrowia lipolytica GN=ATG18 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 4.014e-29
Identity = 80/240 (33.33%), Postives = 124/240 (51.67%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSS-------------TSVLACPG---------LQRGQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITS 1024
            VS+NQDY C + GT  G++IYNC+PF + F +    GG  IVEMLF  +++A+VG GD  Q  P ++ I +  +   I E  F + V  V+L+R R+VV+L+ +IY+Y   ++KL+H IET  NP  +C LS  SS             +S    PG          ++G V I +   L  + ++ AH + +AC               +GT+IR+F+     +L +  +G    +I S
Sbjct:    8 VSFNQDYSCVSVGTPQGYKIYNCDPFGKCFSK--ADGGMGIVEMLFCTSLIAVVGMGDQPQNSPRRLKIVNTKRQSTICELTFPTAVLGVRLNRQRLVVLLQDQIYIYDISNMKLVHTIETSPNPGAVCALSASSSDNNNYLVYPFPAPSSTAFNPGENNINDSSPNRKGDVTIFDCNSLQPVNVVEAHKTPLACLSLNSDGTLLATASDKGTIIRVFSVPKAQKLYEFRRGTYPAQIFS 245          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_CRYNE (Autophagy-related protein 18 OS=Cryptococcus neoformans GN=ATG18 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.093e-26
Identity = 83/265 (31.32%), Postives = 125/265 (47.17%), Query Frame = 2
Query:  362 ELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNS-QYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGL---------------------QRGQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRVKI 1087
            +L+S ++NQDY C A G   G+ I NC+PF +    +   G   IVEMLF  +++ALVGA +N     P K+ I +  +   I E  F + V +VK++R R++VVLE++IY+Y    +KLLH IET  NP  +C LS  S  S LA P                         G V + +   L  + +I AH + IA                +GT++R+F+     +L +  +G     I S   +     LA + D   + I
Sbjct:   10 DLLSCNFNQDYSCIAVGHKKGYTILNCDPFGKVHSNN-DQGATGIVEMLFCTSLVALVGAAENQPSNSPRKLQIVNTKRQSTICELIFPTSVLAVKMNRKRLIVVLENEIYIYDISTMKLLHTIETGPNPNAVCALSSSSERSYLAYPSPVPSASSTPLSSSAIPAPPPAPTTGDVLLFDTISLTALNVIQAHKTPIAALALNSTGTMLATASDKGTVVRVFSVPDAKKLWQFRRGSSSARIFSINFNLMSTLLAVSSDTSTIHI 273          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: HSV2_DEBHA (SVP1-like protein 2 OS=Debaryomyces hansenii GN=HSV2 PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.428e-26
Identity = 86/282 (30.50%), Postives = 128/282 (45.39%), Query Frame = 2
Query:  356 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPF----KETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDL-KLLHQIETLANPRGLCCLSHHSSTSV----------------------------LACPGLQRGQVRIEHFG-----LNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRVKI 1087
            E++++++++NQD GCFA G   GF +YN  P     K  F  +    G   + ML R N LALVG G N ++   K++IWDD + +      F S V +V LSR RI+VVL++++ VY F    K     ET+ N  GL  LS + + S+                            LA PG   GQ++I          N++ +I AH S I C                GT+IR+ +T     L +  +G+D+  +TS   S     LA   DK  + +
Sbjct:   15 ELQILNINFNQDQGCFAVGHEYGFLVYNTNPIDIRVKRNFNINGHGSGIAHITMLHRTNYLALVGGGKNPKFANNKLVIWDDLKRKNSLNLEFMSPVLNVLLSRIRIIVVLKNQVLVYGFSSPPKKFATYETIENEFGLADLSVNFTNSIGNNLSTSNSSISSLVSNQVSYDSNKYQTLAFPGRSIGQIQIVDVSPSGQEKNLVSIIKAHKSKIRCLALNRSGTLVASASETGTIIRVHSTHNTALLYEFRRGLDRAIVTSMKFSHDDSKLAVLSDKNTLHV 296          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_CANGA (Autophagy-related protein 18 OS=Candida glabrata GN=ATG18 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.154e-26
Identity = 63/148 (42.57%), Postives = 93/148 (62.84%), Query Frame = 2
Query:  359 IELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 802
            + +  +++NQ   C + GTS GF I+NC PF + +  D  SGG+ IVEMLF  ++LALVG GD     P ++ I +  +   I E  F + + SVK++R RIVVVL+ +IY+Y   +++LLH IE   NP GL  LS ++ T++LA P
Sbjct:    6 VSIYYLNFNQTGTCISMGTSNGFLIFNCAPFGKFYSED--SGGYGIVEMLFSTSLLALVGIGDQPMLSPRRLRIINTKKHSIICEVTFPTKILSVKMNRSRIVVVLKEQIYIYDINNMRLLHTIEIAPNPEGLVALSCNTDTNLLAYP 151          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_YEAST (Autophagy-related protein 18 OS=Saccharomyces cerevisiae GN=ATG18 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 7.086e-26
Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 802
            +++NQ   C + GTS GF+I+NCEPF + +  D  SGG+ IVEMLF  ++LALVG GD     P ++ I +  +   I E  F + + SVK+++ R+VV+L+ +IY+Y    ++LLH IET  NPRGL  +S   + S L  P
Sbjct:   11 INFNQTGTCISLGTSKGFKIFNCEPFGKFYSED--SGGYAIVEMLFSTSLLALVGIGDQPALSPRRLRIINTKKHSIICEVTFPTSILSVKMNKSRLVVLLQEQIYIYDINTMRLLHTIETNPNPRGLMAMSPSVANSYLVYP 151          
The following BLAST results are available for this feature:
BLAST of DY262705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
HSV2_PICAN5.601e-3134.26SVP1-like protein 2 OS=Pichia angusta GN=HSV2 PE=3... [more]
WIPI4_DANRE7.315e-3133.20WD repeat domain phosphoinositide-interacting prot... [more]
HSV2_YARLI1.630e-3030.80SVP1-like protein 2 OS=Yarrowia lipolytica GN=HSV2... [more]
ATG18_PICAN2.780e-3033.88Autophagy-related protein 18 OS=Pichia angusta GN=... [more]
HSV2_SCHPO1.056e-2931.17SVP1-like protein 2 OS=Schizosaccharomyces pombe G... [more]
ATG18_YARLI4.014e-2933.33Autophagy-related protein 18 OS=Yarrowia lipolytic... [more]
ATG18_CRYNE1.093e-2631.32Autophagy-related protein 18 OS=Cryptococcus neofo... [more]
HSV2_DEBHA1.428e-2630.50SVP1-like protein 2 OS=Debaryomyces hansenii GN=HS... [more]
ATG18_CANGA4.154e-2642.57Autophagy-related protein 18 OS=Candida glabrata G... [more]
ATG18_YEAST7.086e-2642.66Autophagy-related protein 18 OS=Saccharomyces cere... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CH02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262705 ID=DY262705; Name=DY262705; organism=Citrus clementina; type=EST; length=1178bp
TTCCTTTACGTCTCTCTCTGTGAGTCGGGATGAATTGAATCTCTCTCTCT
CTCTCTCTCTCTCTCTTTCAGATCTCTCACAAAGCGAAAGAGAAAATTTG
ATCTGATGATCATTAATTTGATTTCTCATATCACAGCATCAAGGGGGTGC
CACTGAAATTATTCACAATCGAGAAGATTTTCATCTTTGATTGCTGCTGC
TGCTGCTGACCGTTTCTTCGTCCCACATGACTTCAACTGTTTCGACATCT
CGAGAAATTCTTCCACCGGGCCCCTTTGGATCCCCCAATGCTGGCGCTTC
GGCTTCGGCTTCGGCTTCATTTGGCCACCCGCAAACGGCGTTCAGTGATG
TTGATGAAATTGAGTTGATCTCTGTGTCTTGGAACCAGGACTATGGTTGT
TTTGCCGCTGGAACTAGTTGTGGGTTTCGAATTTATAATTGTGAGCCGTT
TAAGGAAACTTTTAGACGTGATTTGAAAAGTGGTGGGTTTAGGATTGTTG
AGATGTTGTTTCGTTGTAATATATTGGCACTCGTTGGTGCTGGGGATAAT
TCTCAGTATCCTCCTACTAAAGTTATTATTTGGGATGATCATCAGAGCAG
GTGCATTGGTGAGTTTGCGTTTAGGTCTGATGTTCGCTCTGTGAAATTGA
GTAGGGATCGAATTGTGGTTGTTCTTGAGCATAAGATATATGTTTATAGT
TTTGTTGATCTCAAGTTGCTTCATCAGATTGAGACTCTTGCGAATCCGAG
GGGGCTTTGTTGTCTTTCTCATCATTCGAGTACTTCTGTGTTGGCTTGCC
CGGGTCTCCAACGTGGACAGGTTCGCATTGAGCACTTTGGGCTCAATATG
ATAAAGCTAATAAATGCTCATGATTCTCATATTGCGTGCTTTACCCTCAC
ATTGGATGGCCTGCTTCTTGCTACTGCTAGTACCAGGGGCACTTTGATAA
GAATTTTCAACACCGTGGGAGGTACTCGCTTGGCAAAAGTTCCAAAAGGT
GTTGACAAAACAGAGATTACCAGTAATGCTCTGTCCCCAACCGTCCAATG
GTTGGCGGGGGCAAGGGACAAAGGCCGGGTCAAAATTTCGTCCCCGGGGT
TAAGGGGGTTGGAAGGACCCCTCTCCCCCCCTTTTACCCTTTCCCAAAAG
ACAAAATTTCTAAACCTTTCTTTTCTTT
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