DY262705

Overview
NameDY262705
Unique NameDY262705
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1178
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_YEAS7 (Autophagy-related protein 18 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG18 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 7.086e-26
Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 802
            +++NQ   C + GTS GF+I+NCEPF + +  D  SGG+ IVEMLF  ++LALVG GD     P ++ I +  +   I E  F + + SVK+++ R+VV+L+ +IY+Y    ++LLH IET  NPRGL  +S   + S L  P
Sbjct:   11 INFNQTGTCISLGTSKGFKIFNCEPFGKFYSED--SGGYAIVEMLFSTSLLALVGIGDQPALSPRRLRIINTKKHSIICEVTFPTSILSVKMNKSRLVVLLQEQIYIYDINTMRLLHTIETNPNPRGLMAMSPSVANSYLVYP 151          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_USTMA (Autophagy-related protein 18 OS=Ustilago maydis GN=ATG18 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 7.086e-26
Identity = 88/279 (31.54%), Postives = 130/279 (46.59%), Query Frame = 2
Query:  365 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDN---SQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP---------------------GLQRGQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRV---KISSPGLRGLEG 1117
            L+SV++NQD+ C A GT  G+ I NCEPF   +  +  +G   +VEMLF  +++ALV   D    S   P ++ I +  +   I E  F + +  VKL+R R+VVVLE +IY+Y   ++KLLH IET  NP  +C LS  S    LA P                         G V I +   L++  +I AH + I+                +GT+IR+F+     +L +  +G     I S   +     LA + D   V   K+SS    G +G
Sbjct:   14 LLSVNFNQDHSCIAVGTRDGYSITNCEPFGRVYTNN--AGPTSLVEMLFCTSLVALVATSDTDPKSNASPRRLQIVNTKRQSVICELLFPTAILGVKLNRRRLVVVLEQEIYIYDISNMKLLHTIETSPNPMAICALSPSSENCFLAYPSPVASPTSPFSNSGASSSAEANTTAGDVLIFDLLSLSVTNVIQAHKTPISALALNATGTLLATASDKGTVIRVFSIPAAQKLHQFRRGSYAARIYSLNFNAVSTLLAVSSDTETVHIFKLSSGAGAGAKG 290          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_ASPNC (Autophagy-related protein 18 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg18 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.209e-25
Identity = 84/281 (29.89%), Postives = 132/281 (46.98%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRVKISSPGLRGLEGPLSPPFTLS 1144
            V++NQDY   A  TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R R+V+VLE +IY+Y    +KLL+ IET  NP  LC LS  S    LA P  Q+                       G+V I +   L  I +I AH S +AC               +GT+IR+F+   G +L +  +G   + I S + + T   L  +     + +    L+      +P  +L+
Sbjct:    6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLEDQIYLYDIQTMKLLYTIETSPNPNALCALSPSSDNCYLAYPLPQKAPPSTFQPPAHAPPGTTHVTPTSGEVLIFDTLKLEAINVIEAHRSPLACITLNSDGTLIATASDKGTIIRVFSVPDGRKLYQFRRGSIPSRIYSMSFNTTSTLLCVSSSTETIHLFKLSLQSQSPDATPSSSLT 277          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_ASPTN (Autophagy-related protein 18 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg18 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.517e-25
Identity = 79/247 (31.98%), Postives = 121/247 (48.99%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPT 1042
            V++NQDY   A  TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R R+V+VLE +IY+Y    +KLL+ IET  NP  +C LS  S    LA P  Q+                       G+V I +   L  I +I AH S +AC               +GT+IR+F+   G +L +  +G   + I S + + T
Sbjct:    6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLEDQIYLYDIQTMKLLYTIETSPNPNAICALSPSSDNCYLAYPLPQKAPPSSFNPPSHAPPGSTHVSPTTGEVLIFDALKLEAINVIEAHRSPLACITLNSDGTLIATASDKGTIIRVFSVPDGHKLYQFRRGSIPSRIYSMSFNTT 243          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_NEOFI (Autophagy-related protein 18 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg18 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 4.593e-25
Identity = 85/279 (30.47%), Postives = 131/279 (46.95%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRV---KISSPGLRGLEGPLSP 1129
            V++NQDY   A  TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R R+V+VLE +IY+Y    +KLL+ I+T  NP  +C LS  S    LA P  Q+                       G+V I +   L  I +I AH S +AC               +GT+IR+F+   G +L +  +G   + I S + + T   L  +     +   K+S P       P SP
Sbjct:    6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLEDQIYLYDIQTMKLLYTIQTSPNPNAICALSPSSDNCYLAYPLPQKAPPSSFNPPSHTPPGSTHVSPTSGEVLIFDTLKLEAINVIEAHRSPLACITLNSDGTLLATASDKGTIIRVFSVPDGHKLYQFRRGSMPSRIFSMSFNTTSTLLCVSSSTETIHLFKLSHPTSSPDASPSSP 275          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_ASPCL (Autophagy-related protein 18 OS=Aspergillus clavatus GN=atg18 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.023e-24
Identity = 78/247 (31.58%), Postives = 121/247 (48.99%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPT 1042
            V++NQDY   A  TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R R+V+VLE +IY+Y    +KLL+ I+T  NP  +C LS  S    LA P  Q+                       G+V I +   L  I +I AH S +AC               +GT+IR+F+   G +L +  +G   + I S + + T
Sbjct:    6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKEGHIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLEDQIYLYDIQTMKLLYTIQTSPNPNAICALSPSSDNCYLAYPLPQKAPPSSFTPPSHAPPGNTHVSPTSGEVLIFDSLKLEAINVIEAHRSPLACITLNSDGTLLATASDKGTIIRVFSVPDGHKLYQFRRGSMPSRIFSMSFNTT 243          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_DICDI (Autophagy-related protein 18 OS=Dictyostelium discoideum GN=atg18 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.745e-24
Identity = 74/243 (30.45%), Postives = 129/243 (53.09%), Query Frame = 2
Query:  365 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQ-RGQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRVKI 1087
            ++ +++NQD+ C A GT  G++I+N +P+  T      +GG  +VEMLF  +++++VG+GD +     +++I +   +  I +  F + + SVK++R RIVV++E KI++Y   ++KLL   E  +NP+GLC LS  S+T+ +  P  Q  G + + +   L  + LI AH S I+                +GT+IR+F      +     +G     I S   S   ++L  + D G + I
Sbjct:   11 ILFLNFNQDFSCIAVGTPEGYKIFNSDPY--TLYYSQSNGGAGLVEMLFSTSLVSIVGSGDGNT-SQRRLLINNIKNNIPICDLNFVTAILSVKMNRKRIVVIMETKIHIYDINNMKLLETREIASNPKGLCALS-PSNTNYIVYPASQNNGNILVMDVLTLETVNLIQAHKSQISALALSQDGTLLATASDKGTVIRVFALPYANKSLSFRRGSIPAIIHSMTFSLDGRYLCVSSDTGTIHI 249          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_MAGGR (Autophagy-related protein 18 OS=Magnaporthe grisea GN=ATG18 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.888e-24
Identity = 81/258 (31.40%), Postives = 120/258 (46.51%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP-----------------------GLQRGQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNA--LSPTVQWLAGARD 1069
            +++NQD+GC A GTS GFRIY+ EPF + F  +   G   I+EMLF  +++AL+         P  +II +  +   I E  F S V +V+L+R R+ VVLE +IY+Y   ++ LL  I T  NP  +C LS  S    LA P                           G V I +   L  + +I AH S ++C                GT+IR+F    G +L +  +G   + I S +  LS T+  ++   D
Sbjct:    9 ITFNQDHGCLAVGTSRGFRIYHTEPFSKIFSSE--DGNVSIIEMLFSTSLVALI-------LSPRHLIIQNTKRGSVICELTFPSAVLAVRLNRKRLAVVLEDEIYLYDIANMSLLFTIATSPNPSAICALSPSSENCFLAYPLPKPREDKDDKRPSHAPPLPTYIPPTSGDVLIFDAITLKAVNVIEAHRSPLSCIAINSEGTLLATASETGTIIRVFTVPKGQKLYQFRRGTYPSTIYSMSFNLSSTLLCVSSTSD 257          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_ASPOR (Autophagy-related protein 18 OS=Aspergillus oryzae GN=atg18 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.888e-24
Identity = 77/247 (31.17%), Postives = 120/247 (48.58%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPT 1042
            V++NQDY   A  T+ GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R R+V+VLE +IY+Y    +KLL+ IET  NP  +C LS  S    LA P   +                       G+V I +   L  I +I AH S +AC               +GT+IR+F+   G +L +  +G   + I S + + T
Sbjct:    6 VTFNQDYSYLAVATAKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLEDQIYLYDIQTMKLLYTIETSPNPSAICALSPSSDNCYLAYPLPHKAPPTSFTPPSHAPPGNTHISPTSGEVLIFDTLKLEAINVIEAHRSPLACITLNSDGTLIATASDKGTIIRVFSVPDGHKLYQFRRGSIPSRIYSMSFNTT 243          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_BOTFB (Autophagy-related protein 18 OS=Botryotinia fuckeliana (strain B05.10) GN=atg18 PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 5.078e-24
Identity = 85/279 (30.47%), Postives = 134/279 (48.03%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP--------GLQR---------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRVKISSPG--LRGL-EGPLSP 1129
            V++NQDY C A GT+ GFRIY+ EPF + F  D ++    I+EMLF  +++A+       +  P  ++I +  +   I E  F S V +V+L+R R  V+LE +IY+Y   ++ LL+ I T ANP  +C LS  S    LA P        G +R               G+V I +   L  + +I AH + ++C                GT+IR+F+   G +L +  +G   + I S + + +   L  + +   + I   G  + GL E P SP
Sbjct:    4 VTFNQDYSCLAVGTAKGFRIYHTEPFSKIFTGDNEN--VTIIEMLFSTSLVAI-------KQSPRHIVIQNTKRGTVICELTFPSAVLAVRLNRKRFAVLLEEEIYLYDIQNMGLLYTISTSANPNAICSLSASSDNCYLAYPLPKPREETGDKRPAHAPPLSPYVAPTSGEVLIFDAKSLKAVNVIEAHRAPLSCIALNNDGTLLATASETGTIIRVFSVPDGQKLYQFRRGTYPSSIFSLSFNMSSTLLCVSSNSDTIHIFRLGGPVTGLPESPQSP 273          
The following BLAST results are available for this feature:
BLAST of DY262705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
ATG18_YEAS77.086e-2642.66Autophagy-related protein 18 OS=Saccharomyces cere... [more]
ATG18_USTMA7.086e-2631.54Autophagy-related protein 18 OS=Ustilago maydis GN... [more]
ATG18_ASPNC1.209e-2529.89Autophagy-related protein 18 OS=Aspergillus niger ... [more]
ATG18_ASPTN3.517e-2531.98Autophagy-related protein 18 OS=Aspergillus terreu... [more]
ATG18_NEOFI4.593e-2530.47Autophagy-related protein 18 OS=Neosartorya fische... [more]
ATG18_ASPCL1.023e-2431.58Autophagy-related protein 18 OS=Aspergillus clavat... [more]
ATG18_DICDI1.745e-2430.45Autophagy-related protein 18 OS=Dictyostelium disc... [more]
ATG18_MAGGR3.888e-2431.40Autophagy-related protein 18 OS=Magnaporthe grisea... [more]
ATG18_ASPOR3.888e-2431.17Autophagy-related protein 18 OS=Aspergillus oryzae... [more]
ATG18_BOTFB5.078e-2430.47Autophagy-related protein 18 OS=Botryotinia fuckel... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CH02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262705 ID=DY262705; Name=DY262705; organism=Citrus clementina; type=EST; length=1178bp
TTCCTTTACGTCTCTCTCTGTGAGTCGGGATGAATTGAATCTCTCTCTCT
CTCTCTCTCTCTCTCTTTCAGATCTCTCACAAAGCGAAAGAGAAAATTTG
ATCTGATGATCATTAATTTGATTTCTCATATCACAGCATCAAGGGGGTGC
CACTGAAATTATTCACAATCGAGAAGATTTTCATCTTTGATTGCTGCTGC
TGCTGCTGACCGTTTCTTCGTCCCACATGACTTCAACTGTTTCGACATCT
CGAGAAATTCTTCCACCGGGCCCCTTTGGATCCCCCAATGCTGGCGCTTC
GGCTTCGGCTTCGGCTTCATTTGGCCACCCGCAAACGGCGTTCAGTGATG
TTGATGAAATTGAGTTGATCTCTGTGTCTTGGAACCAGGACTATGGTTGT
TTTGCCGCTGGAACTAGTTGTGGGTTTCGAATTTATAATTGTGAGCCGTT
TAAGGAAACTTTTAGACGTGATTTGAAAAGTGGTGGGTTTAGGATTGTTG
AGATGTTGTTTCGTTGTAATATATTGGCACTCGTTGGTGCTGGGGATAAT
TCTCAGTATCCTCCTACTAAAGTTATTATTTGGGATGATCATCAGAGCAG
GTGCATTGGTGAGTTTGCGTTTAGGTCTGATGTTCGCTCTGTGAAATTGA
GTAGGGATCGAATTGTGGTTGTTCTTGAGCATAAGATATATGTTTATAGT
TTTGTTGATCTCAAGTTGCTTCATCAGATTGAGACTCTTGCGAATCCGAG
GGGGCTTTGTTGTCTTTCTCATCATTCGAGTACTTCTGTGTTGGCTTGCC
CGGGTCTCCAACGTGGACAGGTTCGCATTGAGCACTTTGGGCTCAATATG
ATAAAGCTAATAAATGCTCATGATTCTCATATTGCGTGCTTTACCCTCAC
ATTGGATGGCCTGCTTCTTGCTACTGCTAGTACCAGGGGCACTTTGATAA
GAATTTTCAACACCGTGGGAGGTACTCGCTTGGCAAAAGTTCCAAAAGGT
GTTGACAAAACAGAGATTACCAGTAATGCTCTGTCCCCAACCGTCCAATG
GTTGGCGGGGGCAAGGGACAAAGGCCGGGTCAAAATTTCGTCCCCGGGGT
TAAGGGGGTTGGAAGGACCCCTCTCCCCCCCTTTTACCCTTTCCCAAAAG
ACAAAATTTCTAAACCTTTCTTTTCTTT
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