DY262705

Overview
NameDY262705
Unique NameDY262705
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1178
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: HSV2_EMENI (SVP1-like protein 2 OS=Emericella nidulans GN=hsv2 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.930e-23
Identity = 73/216 (33.80%), Postives = 107/216 (49.54%), Query Frame = 2
Query:  503 MLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVD-LKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRVKISSPGLRGLEGPLSPPFTLSQ 1147
            ML + N LALVG G   ++P  K++IWDD + + +    FR+ V  V+LS+ RIVV L + I+ + F    K L   ET  NP GL CL       VLA PG   GQV++       + +I AH + +                  GTL+RIF T    ++A++ +GVD   I S A+SP+   LA   DK  + + +     L  P + P++  Q
Sbjct:    1 MLGQSNYLALVGGGRQPKFPQNKLVIWDDAKQKVVITLEFRTSVLGVRLSKSRIVVALLNSIHTFVFSSPPKKLAVFETTDNPLGLACLGQ----KVLAFPGRSPGQVQLVELETGNVSIIPAHSTPLRAMALSPDGEVLATASEAGTLVRIFATSNCAKMAELRRGVDHAIIFSLAISPSNNLLAVTSDKSTLHVFN-----LPHPRNAPYSNQQ 207          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: WIPI4_RAT (WD repeat domain phosphoinositide-interacting protein 4 OS=Rattus norvegicus GN=Wdr45 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.520e-23
Identity = 62/161 (38.51%), Postives = 90/161 (55.90%), Query Frame = 2
Query:  371 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDD------HQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVD-LKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRI 829
            S+ +NQD  CF      G RIYN EP  E    D +  G   +VEML R N+LALVG G + ++    V+IWDD       + + + EF F   V +V++  D+IV+VL ++IYVYSF D  + L + +T  NP+GLC L       +L  PG + G +++
Sbjct:   11 SLHFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSVGLVEMLHRSNLLALVGGGSSPKFSEISVLIWDDAREGKDSKDKLVLEFTFTKPVLAVRMRHDKIVIVLRNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQL 171          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_KLULA (Autophagy-related protein 18 OS=Kluyveromyces lactis GN=ATG18 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.520e-23
Identity = 54/143 (37.76%), Postives = 90/143 (62.94%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 802
            +++NQ+  C + GTS GF+I+NCEPF   ++ +   GG  IVEMLF  ++LA+VG GDN    P ++ + +  +   I E  F + + SVK+++ R+ V+L+ +IY+Y   +++LLH IET  N +G+  +S +S  + L  P
Sbjct:   10 INFNQNGSCISMGTSQGFKIFNCEPFGRFYQDE--EGGCGIVEMLFSTSLLAVVGMGDNPAMSPRRLRMLNTKRHSVICEVTFPTTILSVKMNKSRLAVLLQEQIYIYDISNMRLLHTIETSMNAQGIMSMSPNSENNYLVYP 150          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_ASPFU (Autophagy-related protein 18 OS=Aspergillus fumigatus GN=atg18 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.520e-23
Identity = 85/286 (29.72%), Postives = 132/286 (46.15%), Query Frame = 2
Query:  374 VSWNQDYGCFAAG-------TSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPTVQWLAGARDKGRV---KISSPGLRGLEGPLSP 1129
            V++NQDY   A G       TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +V+L+R R+V+VLE +IY+Y    +KLL+ I+T  NP  +C LS  S    LA P  Q+                       G+V I +   L  I +I AH S +AC               +GT+IR+F+   G +L +  +G   + I S + + T   L  +     +   K+S P       P SP
Sbjct:    6 VTFNQDYSYLAVGSVSPPSATSKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVRLNRKRLVIVLEDQIYLYDIQTMKLLYTIQTSPNPNAICALSPSSDNCYLAYPLPQKAPPSSFNPPSHTPPGTTHVSPTSGEVLIFDTLKLEAINVIEAHRSPLACITLNSDGTLLATASDKGTIIRVFSVPDGHKLYQFRRGSMPSRIFSMSFNTTSTLLCVSSSTETIHLFKLSHPTSSPDTSPSSP 282          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_SCLS1 (Autophagy-related protein 18 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg18 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.299e-23
Identity = 82/279 (29.39%), Postives = 134/279 (48.03%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP--------GLQR---------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNA--LSPTVQWLAGARDKGRV-KISSPGLRGLEGPLSP 1129
            V++NQDY C A GT+ GFRIY+ +PF + F  D ++    I+EMLF  +++A+       +  P  ++I +  +   I E  F S V +V+L+R R  V+LE +IY+Y   ++ LL+ I T ANP  +C LS  S    LA P        G +R               G+V I +   L  + ++ AH + ++C                GT+IR+F+   G +L +  +G   + I S +  +S T+  ++   D   + ++  P     E P SP
Sbjct:    4 VTFNQDYTCLAVGTAKGFRIYHTDPFSKIFTGDNEN--VTIIEMLFSTSLVAI-------KQSPRHIVIQNTKRGTVICELTFPSAVLAVRLNRKRFAVLLEEEIYLYDIQNMGLLYTISTSANPNAICALSASSENCYLAYPLPKPREETGDKRPAHAPPLSPYVAPTSGEVLIFDAKSLKAVNVVEAHRAPLSCIALNNDGTLLATASETGTIIRVFSVPDGQKLYQFRRGTYPSTIFSLSFNMSSTLLCVSSNSDTIHIFRLGGPVTGMPESPRSP 273          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_EMENI (Autophagy-related protein 18 OS=Emericella nidulans GN=atg18 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.299e-23
Identity = 81/262 (30.92%), Postives = 122/262 (46.56%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRG---------------LCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITSNALSPT 1042
            V++NQDY   A  TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R R+V+VLE +IY+Y    +KLL+ IET  NP G               LC LS  S    LA P  Q+                       G+V I +   L  I +I AH S +AC               +GT+IR+F+   G +L +  +G   + I S + + T
Sbjct:    6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKDGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLEDQIYLYDIQTMKLLYTIETSPNPNGKVSVQLNEPSLTPTALCALSPSSENCYLAYPLPQKAAPSSFNPPAHAPPGNTHVSPTSGEVLIFDTLKLEAINVIEAHRSPLACITLNSDGTLIATASDKGTIIRVFSVPDGHKLYQFRRGSIPSRIFSMSFNTT 258          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_PICPA (Autophagy-related protein 18 OS=Pichia pastoris GN=ATG18 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 7.332e-23
Identity = 70/252 (27.78%), Postives = 117/252 (46.43%), Query Frame = 2
Query:  377 SWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP-------------------------------------GLQRGQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEI 1018
            ++NQD  C + G   G++I+N EPF +     L      IVEMLF  +++A+VG G+     P K+ +++  +   I E  F + + +VK++R+R+VV+LE  IY+Y    +++LH IET +NP GL  LS  +  ++LA P                                      L+ G V I     L  I +I AH + ++                +GT++R+F+   G +L +  +G   T+I
Sbjct:   26 NFNQDSTCVSVGYQSGYKIFNVEPFTKCL--SLADTSIGIVEMLFSSSLVAIVGLGELPDSSPRKLKVFNTKRRSIICELTFPTSILAVKMNRERMVVLLEDTIYIYDINTMRILHTIETPSNPEGLIALSSSTENNILAYPSPPKLPNRQETSTKGTTNDNDRSHLENIPENVNANSSNLRNGDVIIFNSHTLQPISVIEAHKAQLSAIALSSDGTLLATASNKGTIVRVFDVETGVKLYQFRRGTYPTKI 275          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_ASHGO (Autophagy-related protein 18 OS=Ashbya gossypii GN=ATG18 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 7.332e-23
Identity = 56/143 (39.16%), Postives = 88/143 (61.54%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 802
            +++NQ   C + GTS G +I+NC+PF   +  +   GG  IVEMLF  ++LA+VG GDN    P ++ I +  +   I E  F + + +VK++R R+VV+L+ +IY+Y    ++LL+ IET +NPRGL  +S     + LA P
Sbjct:   12 INFNQTGTCISMGTSEGLKIFNCDPFGRFYSDE--DGGCGIVEMLFSTSLLAVVGIGDNPSMSPRRLRILNTKRHSVICEVTFPTTILAVKMNRSRLVVLLQEQIYIYDINSMRLLYTIETSSNPRGLISMSPSLENNYLAYP 152          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_COCIM (Autophagy-related protein 18 OS=Coccidioides immitis GN=ATG18 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.786e-22
Identity = 74/277 (26.71%), Postives = 130/277 (46.93%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKG------------VDKTEITSNALSPTVQWLAGARDKGRVKISSP 1096
            V++NQDY   A GTS GFRI+  +PF +++  + K G   I+EMLF  +++A++         P ++ I +  +   I E  F + V +++L+R R+V+VLE +IY+Y    +KL++ IET  NP  +C L+  S    LA P  Q+                       G+V I + + L  + ++ AH S ++                +GT+IR+F+     +L +  +G            +  T +  ++ + T+      + +G  K SSP
Sbjct:    6 VTFNQDYSYLAVGTSKGFRIFTTDPFGKSY--ETKEGNIAILEMLFSTSLVAVI-------LSPRRLQIMNTKRQSVICELTFPTTVLAIRLNRKRLVIVLEDQIYIYDIQTMKLVYTIETSPNPNAICALAPSSDNCYLAYPLPQKAPPPSFSPPSHGPPSNTHIPPTSGEVLIFDAYKLEAVNVVEAHKSPLSFLALNSEGTLLATASDKGTIIRVFSVPAAHKLYQFRRGSMPSRIYSMSFNITSTLLCVSSATETIHIFKLGQQQGLSKTSSP 273          
BLAST of DY262705 vs. ExPASy Swiss-Prot
Match: ATG18_CANAL (Autophagy-related protein 18 OS=Candida albicans GN=ATG18 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.786e-22
Identity = 80/256 (31.25%), Postives = 115/256 (44.92%), Query Frame = 2
Query:  374 VSWNQDYGCFAAGTSCGFRIYNCEP-FKETF--RRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------------------GQVRIEHF-GLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGGTRLAKVPKGVDKTEITS 1024
            +S+NQD  C   G   G++I+NC+P F  +F  + D  +G   IVEML+  ++LA V  G+     P K+ I +      I +  F S +  VKL+  R++VVLE +IY+Y    +KLLH IET  N  GL  +S+  S S LA P   +                                   G V I +   L  I +I AH S IA                +GT++RIF    GT+L +  +G   T+I S
Sbjct:   47 ISFNQDASCITIGLKNGYKIFNCQPNFGRSFQFKNDESTG---IVEMLYCTSLLATVAQGEEIGSSPRKLKIINTKTKSTICDLIFPSTILQVKLTNTRLIVVLEDQIYLYDITTMKLLHTIETSPNLSGLSAISYDDSNSYLAYPSPPKTITHDSLLASGINTNGGSNSTQNNISSVSNTPNRVGDVIIFNLTSLQPISVIEAHKSTIASMAFSNNGLYLATASDKGTIVRIFEVATGTKLYQFRRGTYPTKIYS 299          
The following BLAST results are available for this feature:
BLAST of DY262705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
HSV2_EMENI1.930e-2333.80SVP1-like protein 2 OS=Emericella nidulans GN=hsv2... [more]
WIPI4_RAT2.520e-2338.51WD repeat domain phosphoinositide-interacting prot... [more]
ATG18_KLULA2.520e-2337.76Autophagy-related protein 18 OS=Kluyveromyces lact... [more]
ATG18_ASPFU2.520e-2329.72Autophagy-related protein 18 OS=Aspergillus fumiga... [more]
ATG18_SCLS14.299e-2329.39Autophagy-related protein 18 OS=Sclerotinia sclero... [more]
ATG18_EMENI4.299e-2330.92Autophagy-related protein 18 OS=Emericella nidulan... [more]
ATG18_PICPA7.332e-2327.78Autophagy-related protein 18 OS=Pichia pastoris GN... [more]
ATG18_ASHGO7.332e-2339.16Autophagy-related protein 18 OS=Ashbya gossypii GN... [more]
ATG18_COCIM2.786e-2226.71Autophagy-related protein 18 OS=Coccidioides immit... [more]
ATG18_CANAL2.786e-2231.25Autophagy-related protein 18 OS=Candida albicans G... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CH02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262705 ID=DY262705; Name=DY262705; organism=Citrus clementina; type=EST; length=1178bp
TTCCTTTACGTCTCTCTCTGTGAGTCGGGATGAATTGAATCTCTCTCTCT
CTCTCTCTCTCTCTCTTTCAGATCTCTCACAAAGCGAAAGAGAAAATTTG
ATCTGATGATCATTAATTTGATTTCTCATATCACAGCATCAAGGGGGTGC
CACTGAAATTATTCACAATCGAGAAGATTTTCATCTTTGATTGCTGCTGC
TGCTGCTGACCGTTTCTTCGTCCCACATGACTTCAACTGTTTCGACATCT
CGAGAAATTCTTCCACCGGGCCCCTTTGGATCCCCCAATGCTGGCGCTTC
GGCTTCGGCTTCGGCTTCATTTGGCCACCCGCAAACGGCGTTCAGTGATG
TTGATGAAATTGAGTTGATCTCTGTGTCTTGGAACCAGGACTATGGTTGT
TTTGCCGCTGGAACTAGTTGTGGGTTTCGAATTTATAATTGTGAGCCGTT
TAAGGAAACTTTTAGACGTGATTTGAAAAGTGGTGGGTTTAGGATTGTTG
AGATGTTGTTTCGTTGTAATATATTGGCACTCGTTGGTGCTGGGGATAAT
TCTCAGTATCCTCCTACTAAAGTTATTATTTGGGATGATCATCAGAGCAG
GTGCATTGGTGAGTTTGCGTTTAGGTCTGATGTTCGCTCTGTGAAATTGA
GTAGGGATCGAATTGTGGTTGTTCTTGAGCATAAGATATATGTTTATAGT
TTTGTTGATCTCAAGTTGCTTCATCAGATTGAGACTCTTGCGAATCCGAG
GGGGCTTTGTTGTCTTTCTCATCATTCGAGTACTTCTGTGTTGGCTTGCC
CGGGTCTCCAACGTGGACAGGTTCGCATTGAGCACTTTGGGCTCAATATG
ATAAAGCTAATAAATGCTCATGATTCTCATATTGCGTGCTTTACCCTCAC
ATTGGATGGCCTGCTTCTTGCTACTGCTAGTACCAGGGGCACTTTGATAA
GAATTTTCAACACCGTGGGAGGTACTCGCTTGGCAAAAGTTCCAAAAGGT
GTTGACAAAACAGAGATTACCAGTAATGCTCTGTCCCCAACCGTCCAATG
GTTGGCGGGGGCAAGGGACAAAGGCCGGGTCAAAATTTCGTCCCCGGGGT
TAAGGGGGTTGGAAGGACCCCTCTCCCCCCCTTTTACCCTTTCCCAAAAG
ACAAAATTTCTAAACCTTTCTTTTCTTT
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