DY262716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: RME6_DROPS (Receptor-mediated endocytosis protein 6 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA14078 PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 7.466e-18 Identity = 60/171 (35.09%), Postives = 89/171 (52.05%), Query Frame = 1 Query: 331 ELDSAGEGLEKYVMTKLFTRV-FASIPDDVKTDEQLSEKIALVQQFVRPEN--LDIKASFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVGEAAYFFTNMLSAESFISNID 834 ++D+A E +E+ ++ ++ +V F + DV D LS I +Q+FV P + L I + E W AQ++L + YK PR+KL CI+NC P AD+ LPVLIYV I ANPP L S + YI + + +L GE +++T S FI +D Sbjct: 1606 QVDAAREAIERMLLELMYQQVMFPNEDADVSRDTVLSAHIGKLQRFVHPAHPALCIAQEYLGEAPWTFAQQQLCHMAAYKTPREKLQCIINCISSIMSLLRMSCGRV----PAADDLLPVLIYVVIMANPPYLLSTVEYISCFLGR-KLDGENEFYWTLFGSVVKFIKTMD 1771
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: RME6_CAEEL (Receptor-mediated endocytosis protein 6 OS=Caenorhabditis elegans GN=rme-6 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.721e-14 Identity = 54/177 (30.51%), Postives = 81/177 (45.76%), Query Frame = 1 Query: 310 WAGCSEEELDSAGEGLEKYVMTKLFTRVFASIPD-DVKTDEQLSEKIALVQQFVRPEN--LDIKASFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVGEAAYFFTNMLSAESFISNI 831 W ++ + A +E+YV+ ++ F D D D+ L IA V V P N L I E W AQ EL +++Y +DKL C++ CC V + AD+ PVL++V IKANP L SN+ +++ + G AY++ N SA +I I Sbjct: 919 WNFATDTMMSRAMTTIERYVIFAVYDNAFYPNRDADHHRDKLLRGTIAKVSDVVTPVNDFLKIPEHLHGEAPWPSAQAELSMLDIYVTAQDKLNCVVRCCDVINNLVALSSKNAVAS---ADDLTPVLVFVIIKANPRALLSNVQFVETFAGDRIESGRDAYYWVNFKSAVEYIKTI 1092
BLAST of DY262716 vs. ExPASy Swiss-Prot
Match: RME6_CAEBR (Receptor-mediated endocytosis protein 6 OS=Caenorhabditis briggsae GN=rme-6 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.485e-13 Identity = 56/194 (28.87%), Postives = 85/194 (43.81%), Query Frame = 1 Query: 259 VQSFLANMEAAFRAHPLWAGCSEEELDSAGEGLEKYVMTKLFTRVFASIPD-DVKTDEQLSEKIALVQQFVRP--ENLDIKASFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVGEAAYFFTNMLSAESFISNI 831 +Q+ L + + W +E + A +E++VM ++ F + D K D+ L I V P E L I E W AQ EL ++ Y ++KL C++ CC V + AD+ PVL++V IKANP L SNL +I+ + G AY++ N SA +I I Sbjct: 913 LQNLLTYLRERLMQNYDWNFATESMIARAMTTMERFVMFAVYEIAFWPNREMDQKKDKLLQSVIGKASSSVTPVHEALKIPEHLLGEAPWPSAQAELSMLDNYVTAQEKLNCLVRCCDVINNLVALSSKNAVAS---ADDLTPVLVFVIIKANPRSLLSNLQFIETFAGDQIESGRDAYYWVNFKSAVEYIKTI 1103 The following BLAST results are available for this feature:
BLAST of DY262716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262716 ID=DY262716; Name=DY262716; organism=Citrus clementina; type=EST; length=1218bpback to top |