DY262742

Overview
NameDY262742
Unique NameDY262742
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length776
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_CANGA (Glutamine synthetase OS=Candida glabrata GN=GLN1 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.429e-51
Identity = 99/180 (55.00%), Postives = 119/180 (66.11%), Query Frame = 3
Query:    3 IEQEYTLLQ---KDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNGRRITGKHETAEIKTF 533
            IEQEYTL         WP                    A K + RD++++HY+ACLYAGINISGIN EVMP QWEFQVGP  GIS GDQLW+ARY L R+ E  GV +SF PKP++GDWNGAG H N STK MR  GG + I++AIEKL  RH+EHI  YG  N +R+TG+HETA + +F
Sbjct:  130 IEQEYTLFDMYDNVYAWP----KGGYPAPQGPYYCGVGAGKVYARDVIEAHYRACLYAGINISGINAEVMPSQWEFQVGPCEGISMGDQLWMARYFLHRVAEEFGVKISFHPKPLKGDWNGAGCHTNVSTKDMRVPGGMKYIEQAIEKLSKRHNEHIKLYGADNEQRLTGRHETASMTSF 305          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_EMENI (Glutamine synthetase OS=Emericella nidulans GN=glnA PE=3 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.683e-50
Identity = 95/177 (53.67%), Postives = 116/177 (65.54%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNGRRITGKHETAEIKTF 533
            +EQEYTLL  D  WP                      K + RDIV++HY+ACLYAG+ ISGIN EVMP QWE+QVGP  GI  GD LW++R++L R+ E  GV +SFDPKPI+GDWNGAG H N ST S R +GG + I+  ++KL  RH EHIA YGEGN  R+TG+HET  I  F
Sbjct:  118 LEQEYTLLGPD-GWPYGWPKGGFPGAQGPYYCGVGTGKVYCRDIVEAHYRACLYAGVKISGINAEVMPSQWEYQVGPCHGIEMGDHLWISRFLLHRVAEEFGVKISFDPKPIKGDWNGAGLHTNVSTTSTRAEGGIKAIESYMKKLEARHVEHIAVYGEGNEERLTGRHETGNIDKF 293          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA2_DROME (Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3)

HSP 1 Score: 199.134 bits (505), Expect = 2.198e-50
Identity = 100/181 (55.25%), Postives = 118/181 (65.19%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNGRRITGKHETAEIKTF 533
            IEQEYT L  D   PL                   A+K + RDIVD+HY+ACLYAGI +SG N EVMP QWEFQVGP  GIS GD LW+AR++L RI+E  G+V + DPKP+ GDWNGAGAH N STK+MR DGG   I+KA+ KL   H  HI AY    G+ N RR+TGKHET+ I  F
Sbjct:  139 IEQEYTFLDFDGH-PLGWPKNGFPGPQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVSGTNAEVMPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMPGDWNGAGAHTNVSTKAMREDGGIRDIEKAVAKLSKCHERHIRAYDPKQGQDNARRLTGKHETSSINDF 318          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_NEUCR (Glutamine synthetase OS=Neurospora crassa GN=gln-1 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.871e-50
Identity = 95/177 (53.67%), Postives = 118/177 (66.67%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNGRRITGKHETAEIKTF 533
            +EQEYTLL  + + P                      K   RDIV++HYK CLYAG+ ISG N EVMP QWEFQVGP  GI  GD LW+AR++L R++E  G  +SFDPKPI GDWNGAG H N+ST++MR +GG + I+ AI+KL  RH EHIA YGEGN +R+TG+HET  I +F
Sbjct:  134 LEQEYTLLDINDR-PYGWPRNGFPAPQGPYYCGVGTGKVVQRDIVEAHYKCCLYAGVKISGTNAEVMPAQWEFQVGPCDGIEMGDHLWLARFLLHRVSEEFGAKVSFDPKPIPGDWNGAGLHTNFSTENMRKEGGMKYIEDAIKKLEARHKEHIAVYGEGNDKRLTGRHETGSIDSF 309          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA1_CHLRE (Glutamine synthetase cytosolic isozyme OS=Chlamydomonas reinhardtii GN=GLN1 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.896e-50
Identity = 94/178 (52.81%), Postives = 119/178 (66.85%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRN-DGGFEVIKKAIEKLGLRHSEHIAAYGEGNGRRITGKHETAEIKTF 533
            IEQEYTLL    KWPL                   A  A GRD+ + HY+ CL AG+NISG+N EV+P QWE+QVGP  GI+ GD +W++RYI+ R+ E+  V +SFDPKPI GDWNG+G H NYSTK+ R    G++VI++   KL  RH+ HIAAYGEGN RR+TGKHET+ +  F
Sbjct:  155 IEQEYTLLNAITKWPLGWPKGGYPAPQGPYYCSAGAGVAIGRDVAEVHYRLCLAAGVNISGVNAEVLPSQWEYQVGPCEGITMGDHMWMSRYIMYRVCEMFNVEVSFDPKPIPGDWNGSGGHTNYSTKATRTAPDGWKVIQEHCAKLEARHAVHIAAYGEGNERRLTGKHETSSMSDF 332          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_COLGL (Glutamine synthetase OS=Colletotrichum gloeosporioides GN=GLN1 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.395e-50
Identity = 98/177 (55.37%), Postives = 116/177 (65.54%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNGRRITGKHETAEIKTF 533
            +EQEYTLL    + P                      K   RDIVD+HYKACLY+G+ ISG N EVMP QWEFQVGP VGI  GD LW+AR++L RI E  G  +S DPKPI GDWNGAG H+N+STK MR +GG + I+ AI+KL  RH EHIA YGEGN +R+TG+HET  I  F
Sbjct:  132 LEQEYTLLDLSNR-PFGWPANGFPAPQGPYYCGVGTGKVVQRDIVDAHYKACLYSGVKISGTNAEVMPAQWEFQVGPCVGIEMGDHLWLARFLLARIAEEFGAKVSVDPKPIPGDWNGAGLHSNFSTKEMRVEGGMKHIEAAIKKLEGRHKEHIAVYGEGNEKRLTGRHETGAIDQF 307          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_YEAST (Glutamine synthetase OS=Saccharomyces cerevisiae GN=GLN1 PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 8.352e-50
Identity = 96/180 (53.33%), Postives = 118/180 (65.56%), Query Frame = 3
Query:    3 IEQEYTL--LQKDVK-WPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNGRRITGKHETAEIKTF 533
            +EQEYTL  +  DV  WP                    A K + RD++++HY+ACLYAG+ ISGIN EVMP QWEFQVGP  GI  GDQLW+ARY L R+ E  G+ +SF PKP++GDWNGAG H N STK MR  GG + I++AIEKL  RH+EHI  YG  N  R+TG+HETA +  F
Sbjct:  130 LEQEYTLFDMYDDVYGWP----KGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQPGGMKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETASMTAF 305          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_MACFA (Glutamine synthetase OS=Macaca fascicularis GN=GLUL PE=2 SV=3)

HSP 1 Score: 197.208 bits (500), Expect = 8.352e-50
Identity = 97/181 (53.59%), Postives = 120/181 (66.30%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNGRRITGKHETAEIKTF 533
            +EQEYTL+  D   P                    AD+A+GRDIV++HY+ACLYAG+ I+G N EVMP QWEFQ+GP  GIS GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G + I++AIEKL  RH  HI AY    G  N RR+TG HET+ I  F
Sbjct:  134 MEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDF 313          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_HUMAN (Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 SV=4)

HSP 1 Score: 197.208 bits (500), Expect = 8.352e-50
Identity = 97/181 (53.59%), Postives = 120/181 (66.30%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNGRRITGKHETAEIKTF 533
            +EQEYTL+  D   P                    AD+A+GRDIV++HY+ACLYAG+ I+G N EVMP QWEFQ+GP  GIS GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G + I++AIEKL  RH  HI AY    G  N RR+TG HET+ I  F
Sbjct:  133 MEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDF 312          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_SQUAC (Glutamine synthetase, mitochondrial OS=Squalus acanthias PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.091e-49
Identity = 97/181 (53.59%), Postives = 119/181 (65.75%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNGRRITGKHETAEIKTF 533
            +EQEYTLL  D   P                    ADKA+GRDIV++HY+ACLYAGI +SG N EVM  QWE+QVGP  GI  GD LW++R+IL R+ E  G++ SFDPKPI G+WNGAG H N+STK+MR+DGG + I+ +IEKLG RH  HI AY    G  N R +TG HET+ I  F
Sbjct:  162 MEQEYTLLGTDGH-PFGWPSNCFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIELSGTNAEVMAAQWEYQVGPCEGIQMGDHLWISRFILHRVCEDFGIIASFDPKPIPGNWNGAGCHTNFSTKAMRDDGGLKYIEDSIEKLGKRHQYHIRAYDPKGGLDNARALTGHHETSNINEF 341          
The following BLAST results are available for this feature:
BLAST of DY262742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA_CANGA4.429e-5155.00Glutamine synthetase OS=Candida glabrata GN=GLN1 P... [more]
GLNA_EMENI1.683e-5053.67Glutamine synthetase OS=Emericella nidulans GN=gln... [more]
GLNA2_DROME2.198e-5055.25Glutamine synthetase 2 cytoplasmic OS=Drosophila m... [more]
GLNA_NEUCR2.871e-5053.67Glutamine synthetase OS=Neurospora crassa GN=gln-1... [more]
GLNA1_CHLRE4.896e-5052.81Glutamine synthetase cytosolic isozyme OS=Chlamydo... [more]
GLNA_COLGL6.395e-5055.37Glutamine synthetase OS=Colletotrichum gloeosporio... [more]
GLNA_YEAST8.352e-5053.33Glutamine synthetase OS=Saccharomyces cerevisiae G... [more]
GLNA_MACFA8.352e-5053.59Glutamine synthetase OS=Macaca fascicularis GN=GLU... [more]
GLNA_HUMAN8.352e-5053.59Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 ... [more]
GLNA_SQUAC1.091e-4953.59Glutamine synthetase, mitochondrial OS=Squalus aca... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DC09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262742 ID=DY262742; Name=DY262742; organism=Citrus clementina; type=EST; length=776bp
GTATTGAGCAGGAATACACCTTACTGCAGAAGGATGTTAAATGGCCTCTT
GGCTGGCCCATCGGTGGTTATCCTGGGCCTCAGGGACCATACTACTGTGG
TGTTGGTGCTGACAAAGCTTGGGGGCGTGACATTGTGGACTCCCATTACA
AGGCCTGTCTATATGCAGGAATCAACATCAGTGGCATCAATGGAGAAGTC
ATGCCGGGGCAGTGGGAGTTCCAAGTTGGTCCCGCTGTTGGAATTTCTGC
TGGAGATCAGTTGTGGGTTGCCCGCTATATTTTAGAGAGGATTACAGAGA
TTGCTGGAGTTGTGCTTTCTTTCGATCCCAAGCCAATTCAGGGTGACTGG
AATGGAGCTGGTGCTCACGCAAATTACAGCACCAAGTCGATGAGGAACGA
TGGAGGCTTTGAGGTTATTAAGAAAGCAATTGAGAAACTTGGACTGAGGC
ACAGTGAGCACATTGCCGCATATGGTGAAGGCAATGGACGCCGAATCACT
GGGAAACATGAAACAGCTGAAATCAAAACTTTCCAAGGGGGGGGTTGCTA
ACGGGGGGGCATCAACCGGGGTGGGACAAAACCAAAAAAAAAAAAGGAAA
GGGTACCTTTGAGGAAGGGGAACCGGGTTTCAACCGGGATCCCTATGTTG
GCCCCCCCCCGAAATGGCAAAACCCCCTTTTCGGGGAGAAACCTGAAGGG
GCCCCTCACCACACCCTTTAAAAAATTTTTTTTTGGTGCTGGGGGGCTTT
TTATTACGGGGATCCCCAGAATCCCC
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