DY262742

Overview
NameDY262742
Unique NameDY262742
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length776
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_BOVIN (Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV=4)

HSP 1 Score: 196.823 bits (499), Expect = 1.091e-49
Identity = 98/181 (54.14%), Postives = 118/181 (65.19%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNGRRITGKHETAEIKTF 533
            +EQEYTL+  D   P                    ADKA+GRDIV++HY+ACLYAGI I G N EVMP QWEFQ+GP  GI  GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G + I++AIEKL  RH  HI AY    G  N RR+TG HET+ I  F
Sbjct:  133 MEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDF 312          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_PIG (Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 1.861e-49
Identity = 98/181 (54.14%), Postives = 118/181 (65.19%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNGRRITGKHETAEIKTF 533
            +EQEYTL+  D   P                    ADKA+GRDIV++HY+ACLYAGI I G N EVMP QWEFQ+GP  GI  GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G + I++AIEKL  RH  HI AY    G  N RR+TG HET+ I  F
Sbjct:  133 MEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNTRRLTGFHETSNINDF 312          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_CANFA (Glutamine synthetase OS=Canis familiaris GN=GLUL PE=1 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 1.861e-49
Identity = 97/181 (53.59%), Postives = 119/181 (65.75%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNGRRITGKHETAEIKTF 533
            +EQEYTL+  D   P                    ADKA+GRDIV++HY+ACLYAGI I+G N EVMP QWEFQ+GP  GI  GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G + I+++IEKL  RH  HI AY    G  N RR+TG HET+ I  F
Sbjct:  133 MEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIAGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEESIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDF 312          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_ASHGO (Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.861e-49
Identity = 94/180 (52.22%), Postives = 116/180 (64.44%), Query Frame = 3
Query:    3 IEQEYTLLQKDVK---WPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNGRRITGKHETAEIKTF 533
            +EQEYTL   +     WP                    A K + RD+V++HY+ACLYAG+ ISGIN EVMP QWEFQVGP  GI+ GD+LWV RY+L R+ E  GV +SF PKP++GDWNGAG H N ST+ MR  GG   I++AI+KL  RH EHI  YG  N  R+TG+HETA + TF
Sbjct:  129 LEQEYTLFDHNDNVYGWP----KGGFPAPQGPYYCGVGAGKVYARDVVEAHYRACLYAGLRISGINAEVMPSQWEFQVGPCTGITMGDELWVGRYLLHRVAEEFGVKVSFHPKPLKGDWNGAGCHTNVSTREMRQPGGMRYIEEAIDKLSKRHKEHIKLYGSDNELRLTGRHETASMATF 304          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_TUBBO (Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.430e-49
Identity = 94/180 (52.22%), Postives = 118/180 (65.56%), Query Frame = 3
Query:    3 IEQEYTLLQ---KDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNGRRITGKHETAEIKTF 533
            +EQEYTL         WP                      K + RDIV++HYKACL+AGI ISGIN EV+P QWEFQVGP VGI  GD LW++RY+L R+ E  GV +SF PKPI GDWNG+G H N ST++MR++GG + I++AI+KL  RH+EHIA YG+ N  R+TG+HET  I  F
Sbjct:  132 LEQEYTLFDLYGNPYGWP----KGGFPGPQGPYYCGVGTGKVYCRDIVEAHYKACLFAGIKISGINAEVLPSQWEFQVGPCVGIEMGDHLWISRYLLHRVAEEFGVKISFHPKPIPGDWNGSGLHTNVSTQAMRDEGGMKAIEEAIQKLSTRHAEHIAVYGDDNTLRLTGRHETGNIDAF 307          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_KLULA (Glutamine synthetase OS=Kluyveromyces lactis GN=GLN1 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.430e-49
Identity = 95/180 (52.78%), Postives = 118/180 (65.56%), Query Frame = 3
Query:    3 IEQEYTLLQKDVK---WPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNGRRITGKHETAEIKTF 533
            +EQEYTL  +  +   WP                    A K + RD++++HY+ACLYAG+NISGIN EVMP QWEFQVGP  GI+  DQLW+ARY L R+ E  GV +S  PKP++GDWNGAG H N STK MR  GG + I+ AIEKL  RH+EHI  YG  N +R+TG+HETA + TF
Sbjct:  132 LEQEYTLFDQYDQVYGWP----KGGFPAPQGPYYCGVGAGKVFARDVIEAHYRACLYAGVNISGINAEVMPSQWEFQVGPCEGIAMADQLWIARYFLHRVAEEFGVKVSLHPKPLKGDWNGAGCHTNVSTKLMRAPGGMKYIEDAIEKLSKRHNEHIKLYGADNEQRLTGRHETASMSTF 307          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_XENLA (Glutamine synthetase OS=Xenopus laevis GN=glul PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.174e-49
Identity = 99/181 (54.70%), Postives = 118/181 (65.19%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNGRRITGKHETAEIKTF 533
            +EQEYTLL  +   P                    ADK +GRD+V+SHYKACLYAGI I G N EVMP QWEFQVGP  GI  GD LW+AR+IL R+ E  GVV + DPKP+ G+WNGAG H NYST+SMR +GG + I+ AIEKLG RH  HI  Y    G+ N RR+TG+HET+ I  F
Sbjct:  133 MEQEYTLLGINGH-PYGWPENGFPGPQGPYYCGVGADKVYGRDVVESHYKACLYAGIKICGTNAEVMPSQWEFQVGPCEGIDMGDHLWMARFILHRVCEDFGVVATLDPKPMTGNWNGAGCHTNYSTESMRVEGGLKHIEDAIEKLGKRHDYHICVYDPRGGKDNSRRLTGQHETSSIHEF 312          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_RAT (Glutamine synthetase OS=Rattus norvegicus GN=Glul PE=1 SV=3)

HSP 1 Score: 195.282 bits (495), Expect = 3.174e-49
Identity = 97/181 (53.59%), Postives = 118/181 (65.19%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNGRRITGKHETAEIKTF 533
            +EQEYTL+  D   P                    ADKA+GRDIV++HY+ACLYAGI I+G N EVMP QWEFQ+GP  GI  GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G   I++AI+KL  RH  HI AY    G  N RR+TG HET+ I  F
Sbjct:  133 MEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLRCIEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDF 312          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_ACOCA (Glutamine synthetase OS=Acomys cahirinus GN=GLUL PE=2 SV=3)

HSP 1 Score: 195.282 bits (495), Expect = 3.174e-49
Identity = 96/181 (53.04%), Postives = 119/181 (65.75%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNGRRITGKHETAEIKTF 533
            +EQEYTL+  D   P                    ADKA+GRDIV++HY+ACLYAG+ I+G N EVMP QWEFQ+GP  GI  GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G + I++AI+KL  RH  HI AY    G  N RR+TG HET+ I  F
Sbjct:  133 MEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDF 312          
BLAST of DY262742 vs. ExPASy Swiss-Prot
Match: GLNA_MOUSE (Glutamine synthetase OS=Mus musculus GN=Glul PE=1 SV=6)

HSP 1 Score: 194.897 bits (494), Expect = 4.145e-49
Identity = 95/181 (52.49%), Postives = 119/181 (65.75%), Query Frame = 3
Query:    3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNGRRITGKHETAEIKTF 533
            +EQEYTL+  D   P                    ADKA+GRDIV++HY+ACLYAG+ I+G N EVMP QWEFQ+GP  GI  GD LW+AR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G + I++AI+KL  RH  HI AY    G  N RR+TG HET+ I  F
Sbjct:  133 MEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWIARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKCIEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDF 312          
The following BLAST results are available for this feature:
BLAST of DY262742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA_BOVIN1.091e-4954.14Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV... [more]
GLNA_PIG1.861e-4954.14Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV... [more]
GLNA_CANFA1.861e-4953.59Glutamine synthetase OS=Canis familiaris GN=GLUL P... [more]
GLNA_ASHGO1.861e-4952.22Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE... [more]
GLNA_TUBBO2.430e-4952.22Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2... [more]
GLNA_KLULA2.430e-4952.78Glutamine synthetase OS=Kluyveromyces lactis GN=GL... [more]
GLNA_XENLA3.174e-4954.70Glutamine synthetase OS=Xenopus laevis GN=glul PE=... [more]
GLNA_RAT3.174e-4953.59Glutamine synthetase OS=Rattus norvegicus GN=Glul ... [more]
GLNA_ACOCA3.174e-4953.04Glutamine synthetase OS=Acomys cahirinus GN=GLUL P... [more]
GLNA_MOUSE4.145e-4952.49Glutamine synthetase OS=Mus musculus GN=Glul PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DC09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262742 ID=DY262742; Name=DY262742; organism=Citrus clementina; type=EST; length=776bp
GTATTGAGCAGGAATACACCTTACTGCAGAAGGATGTTAAATGGCCTCTT
GGCTGGCCCATCGGTGGTTATCCTGGGCCTCAGGGACCATACTACTGTGG
TGTTGGTGCTGACAAAGCTTGGGGGCGTGACATTGTGGACTCCCATTACA
AGGCCTGTCTATATGCAGGAATCAACATCAGTGGCATCAATGGAGAAGTC
ATGCCGGGGCAGTGGGAGTTCCAAGTTGGTCCCGCTGTTGGAATTTCTGC
TGGAGATCAGTTGTGGGTTGCCCGCTATATTTTAGAGAGGATTACAGAGA
TTGCTGGAGTTGTGCTTTCTTTCGATCCCAAGCCAATTCAGGGTGACTGG
AATGGAGCTGGTGCTCACGCAAATTACAGCACCAAGTCGATGAGGAACGA
TGGAGGCTTTGAGGTTATTAAGAAAGCAATTGAGAAACTTGGACTGAGGC
ACAGTGAGCACATTGCCGCATATGGTGAAGGCAATGGACGCCGAATCACT
GGGAAACATGAAACAGCTGAAATCAAAACTTTCCAAGGGGGGGGTTGCTA
ACGGGGGGGCATCAACCGGGGTGGGACAAAACCAAAAAAAAAAAAGGAAA
GGGTACCTTTGAGGAAGGGGAACCGGGTTTCAACCGGGATCCCTATGTTG
GCCCCCCCCCGAAATGGCAAAACCCCCTTTTCGGGGAGAAACCTGAAGGG
GCCCCTCACCACACCCTTTAAAAAATTTTTTTTTGGTGCTGGGGGGCTTT
TTATTACGGGGATCCCCAGAATCCCC
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