DY262747

Overview
NameDY262747
Unique NameDY262747
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1028
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.807e-20
Identity = 80/257 (31.13%), Postives = 113/257 (43.97%), Query Frame = 1
Query:  139 EDIFSVKVWRASMAELLGTAVLVFALDTIVIS--SIQTDTKTPN--LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLV--FVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYT-KVIPS 885
            ED       RA+++E L TA+ VFA +  ++S   +  D  TP   + +S                ISGGH+NP ++F A L G  S  RA  Y LAQ +G +   L L+          F+L                  G+G   A+ LE   +F  ++A      D ++            +GT+  L V   +   + A   + GAG+NPAR  GPALV  G  W  HWV+W GP + A +A  LY   VIPS
Sbjct:   18 EDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALAS----------------GVGDWHAVLLEATMTFGLMYAYYATVIDPKRGH----------VGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALV--GWRWRHHWVYWLGPFVGAGLAGLLYEYLVIPS 246          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.807e-20
Identity = 79/255 (30.98%), Postives = 112/255 (43.92%), Query Frame = 1
Query:  142 DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFP-------ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ++ S   +RA +AE + T + ++    I + ++    + PN+  S              F        ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K    N      +LGG             V  G      L  EII +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H WD HW+FW GP I     ALY +++
Sbjct:   44 ELSSWSFYRAGIAEFIATFLFLY----ITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQ---TLGGGA---------NTVAHGYTKGSGLGAEIIGTFVL----VYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLV 276          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.666e-20
Identity = 85/296 (28.72%), Postives = 125/296 (42.23%), Query Frame = 1
Query:   49 QPFATPKQEQRLMDEEKKQNPSTWKKILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFP-------ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVV----------TNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            QP  T  Q     D++ K+ P     +    ++ S   +RA +AE + T + ++    I + ++    + PN+  S              F        ISGGHINP V+F   L    S +RA  Y++ QC+G I GA  +K              N +AH ++ G                 GLG       EII +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H WD HW+FW GP I     ALY +++
Sbjct:   19 QPIGTSAQST---DKDYKEPPPA--PLFEPGELSSWSFYRAGIAEFIATFLFLY----ITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGS----------------GLGA------EIIGTFVL----VYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIV 277          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.788e-20
Identity = 79/255 (30.98%), Postives = 116/255 (45.49%), Query Frame = 1
Query:  166 RASMAELLGTAVLVFALDTIVIS--------SIQTDTKTPN--LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGL-VEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI--ACVAFALYTKVIPSQN 891
            RA++AE L T V VFA +  +++        +  T T TP   ++++                +SGGH+NP V+FAA + G  S  RA  Y +AQ +G I   L L+ + TN +                 P G  V  G+     L +EII +F  ++     A D +      R ++ I+    +GL+V  +  V     + GA +NPAR  GPALV  G  W  HW++W GP I  A  A      +IPS N
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLR-LATNGLR----------------PVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPK------RGSIGIIAPLAIGLIVGANILVGGP--FDGASMNPARAFGPALV--GWRWSNHWIYWVGPFIGGALAALIYEYMIIPSVN 251          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.166e-20
Identity = 81/282 (28.72%), Postives = 119/282 (42.20%), Query Frame = 1
Query:   49 QPFATPKQEQRLMDEEKKQNPSTWKKILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXF---PISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            QP  T  Q     D++K         +    ++ S   +RA +AE + T + ++     V+   ++ +K   + +               +    ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K         N    G   NVV P        G      L  EI+ +F+     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H W  HW+FW GP I     A+Y +VI
Sbjct:   19 QPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGN----GGGANVVAP--------GYTKGDGLGAEIVGTFIL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVI 282          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 8.166e-20
Identity = 83/282 (29.43%), Postives = 125/282 (44.33%), Query Frame = 1
Query:   49 QPFATPKQEQRLMDEEKKQNPSTWKKILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXF---PISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            QP  T  Q     D++ K+ P     +    ++ S   +RA +AE + T + ++     V+    + +K   + +               +    ISGGHINP V+F   L    S +RA  Y++ QC+G I GA  +K     K  +  + GG   NVV P        G      L  EI+ +F+     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++   GH WD HW+FW GP I     A+Y +V+
Sbjct:   19 QPIGTAAQGSD--DKDYKEPPPA--PLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF--QKGLYETTGGGA--NVVAP--------GYTKGDGLGAEIVGTFIL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVV 278          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 98.2117 bits (243), Expect = 8.166e-20
Identity = 79/253 (31.23%), Postives = 116/253 (45.85%), Query Frame = 1
Query:  121 KKILGFEDIFSVK-VWRASMAELLGTAVLVFALDTIVISSIQTDTK-TPNLVMSXXXXXXXXXXXXXXFP-ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALY 867
            K+I+G  DI   + +WR  +AE LGT  LV     I I S    T  +P L                 F  +SG HINP V+    +T   S  + A YI++QC+G I GA  +KA   +++     +GG  +  + P        GL T Q + +E + +F+ +F  V    D+R+    G   + I +    G L  +         Y GA +NPAR  GPA+V G   +   WV+W GP +   VA A+Y
Sbjct:    8 KQIVGVSDITENRNIWRMLVAEFLGTFFLV----AIGIGSTTGWTDYSPTLTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEV-----VGGLGVTGIAP--------GLSTGQGVLIEALITFMLVFV-VHGVCDNRRTDVKGSAPLAIGLSITAGHLAAIK--------YTGASMNPARSFGPAVVMGN--YTDLWVYWVGPIVGGIVAGAVY 232          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.393e-19
Identity = 75/255 (29.41%), Postives = 110/255 (43.14%), Query Frame = 1
Query:  142 DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFP-------ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ++ S   +RA +AE + T + ++    + + ++    + PN+  S              F        ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K         N             G   +V  G      L  EI+ +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H WD HW+FW GP I     ALY +++
Sbjct:   45 ELKSWSFYRAGIAEFIATFLFLY----VTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTN------------GGGANVVAHGYTKGSGLGAEIVGTFVL----VYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIV 277          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.103e-19
Identity = 83/282 (29.43%), Postives = 125/282 (44.33%), Query Frame = 1
Query:   49 QPFATPKQEQRLMDEEKKQNPSTWKKILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXF---PISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            QP  T  Q     D++ K+ P     +    ++ S   +RA +AE + T + ++     V+   ++D+   ++ +               +    ISGGHINP V+F   L    S +RA  Y++ QC+G I GA  +K  +         LGG   NVV P        G      L  EII +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H W+ HW+FW GP I     A+Y ++I
Sbjct:   20 QPLGTAAQT----DKDYKEPPPA--PLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKRSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQR---LGG-GANVVNP--------GYTKGDGLGAEIIGTFVL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQII 277          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.053e-19
Identity = 74/253 (29.25%), Postives = 112/253 (44.27%), Query Frame = 1
Query:  166 RASMAELLGTAVLVFALDTIVIS--------SIQTDTKTPN--LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFALYTK--VIPSQ 888
            RA++AE L T V VFA +  ++S        +    T TP   ++++                +SGGH+NP V+F A + G  +  RA  Y +AQ +G I   L L+          F L                  G+G    L LEII +F  ++       D ++  +LG +   + IG ++G  + V         ++GA +NPAR  GPALV  G  W  HW++W GP I     AL  +  VIP++
Sbjct:   24 RATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGFRLAS----------------GVGAVNGLVLEIILTFGLVYVVYSTLIDPKRG-SLG-IIAPLAIGLIVGANILVGGP------FSGASMNPARAFGPALV--GWRWHDHWIYWVGPFIGSALAALIYEYMVIPTE 250          
The following BLAST results are available for this feature:
BLAST of DY262747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
TIP31_ORYSJ2.807e-2031.13Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
PIP13_ARATH2.807e-2030.98Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP14_ARATH3.666e-2028.72Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
TIP32_ARATH4.788e-2030.98Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
PIP13_MAIZE8.166e-2028.72Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP12_ORYSJ8.166e-2029.43Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
AQP_ANOGA8.166e-2031.23Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
PIP15_ARATH1.393e-1929.41Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP1_SOLLC3.103e-1929.43Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
TIP31_ARATH4.053e-1929.25Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA100DD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262747 ID=DY262747; Name=DY262747; organism=Citrus clementina; type=EST; length=1028bp
TCGGAACTGGCCGGTGATATAGAGGGTGAATATGGTGGTAACAGAGTCCA
GCCTTTTGCTACACCAAAGCAAGAGCAGAGACTGATGGATGAAGAGAAGA
AACAGAATCCCTCCACATGGAAAAAGATTTTGGGATTTGAAGACATTTTT
TCTGTGAAAGTGTGGAGAGCATCAATGGCTGAGCTGCTTGGTACAGCAGT
GCTGGTTTTTGCACTGGACACAATTGTCATTTCCTCCATTCAAACAGACA
CAAAGACCCCAAATCTTGTAATGTCAACTTTGGTCGCAATCACAATAACA
ATCCTCCTACTTGCAACTTTTCCAATTTCTGGTGGCCACATCAACCCATT
AGTGTCCTTTGCTGCAGCACTCACTGGCATCGCGTCCTTCTCAAGGGCAG
CCATATACATTTTGGCTCAATGTGTTGGTGGCATTTTCGGTGCACTAGCG
CTGAAAGCTGTGGTGACCAACAAAATTGCACATAATTTTTCACTTGGAGG
CTGCACCCTGAATGTTGTGGTACCTGGGCCAGATGGGCTTGTTGAGATCG
GCTTGGGGACTAGGCAGGCCCTTTGGCTTGAGATAATTTGCTCGTTTGTG
TTCCTTTTTGCTTCTGTGTGGATGGCTTTTGACTCCAGACAAGCCAAGGC
TCTTGGCAGAGTTACCGTATGCATTGTCATTGGAACAGTGTTGGGTCTTC
TGGTTTTTGTCTCGACAACTGTTACTGCTCAAAAGGGCTATGCCGGAGCT
GGGCTCAACCCGGCAAGATGTTTGGGCCCAGCACTCGTTAGAGGAGGCCA
TCTCTGGGATCGCCACTGGGTTTTCTGGGCCGGGCCGGCTATCGCTTGCG
TGGCATTTGCTTTGTACACTAAGGTCATTCCAAGTCAGAATTTGCACACC
ATCAAGTGATGTAGCTTGAAATTCAATCACCCTTTATTGGCTTCTTAGGA
TTAATTTGAAGGTGTTTCATGTTTTTANGGGATTAAAAAAGTGAAATATC
TATTGAAAATTATATTTTATTGTCTAAT
back to top