DY262747

Overview
NameDY262747
Unique NameDY262747
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1028
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.069e-11
Identity = 64/227 (28.19%), Postives = 94/227 (41.41%), Query Frame = 1
Query:  184 LLGTAVLVFALDTIVISSIQTDTKTPN--------LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVL-GLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGP 837
            +LG  VL F    I + +  TD  T            ++              F ISGGH+NP V+ + A+ G  +  R+++YI AQ +        L+          +  GG    V       L E G+G  Q +  E + +F  LF       D R+        +    G +L GLLV  ++   A    +GA +NPAR  GPA+  G  +W  HWV+W GP
Sbjct:   21 VLGELVLTFLFVFIGVGAAMTDGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLR----------WLTGGLATPV-----HALAE-GVGPLQGVVAEAVFTFSLLFVIYATILDPRK--------LLPGAGPLLTGLLVGANSVAGA--ALSGASMNPARSFGPAVASG--VWTHHWVYWVGP 219          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.069e-11
Identity = 57/185 (30.81%), Postives = 75/185 (40.54%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ISGGH NP VS   A+ G    +    Y++AQ  G I  A  L  + T K   +F LG    N       G    G     AL  E++ +F FL   + +    R+  A       I IG  L L+  VS  VT         +NPAR  G AL  GG    + W+FW  P        +  K +
Sbjct:   57 ISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKA--DFQLGSFAANGYGEHSPG----GYSLTAALVTEVVMTFFFLI--IILGSTHRRVPA---GFAPIAIGLALTLIHLVSIPVT------NTSVNPARSTGQALFVGGWALSQLWLFWIAPLFGAAIAGIVWKSV 224          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 2.382e-11
Identity = 73/251 (29.08%), Postives = 108/251 (43.03%), Query Frame = 1
Query:  148 FSVKVWRASMAELLGTAVLVF-ALDTIVISSIQTDTKTPN----LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEI-GLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGR------VTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFAL 864
            FS    RA  AE   T + VF A+ + + + + T  +T +    +  +                +SGGH+NP V+FA A+ G  +   A  Y  +Q +G  F  L L         H  S G       VP     VE+ G G   A  LE + +F+ ++ +V +A D R     GR          +V+G V G  V  + ++T      GA +NPAR  GPA+V G   +    V+WAGP +     AL
Sbjct:   12 FSPPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVL---------HYISAG-----QAVPTTRIAVEMTGFG---AGILEGVLTFMVVY-TVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLT------GASMNPARSFGPAVVSGH--YSNQAVYWAGPMVGAAVAAL 236          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.382e-11
Identity = 54/173 (31.21%), Postives = 74/173 (42.77%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            ISGGH+NP V+    L G  S  RA +Y + Q +        L          ++  GG      +  P   +  G+   Q +  EII +F  LF       D ++    G        G +L   V V   + A   ++GA +NPAR  GPALV G   W  HWV+W GP I
Sbjct:   73 ISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLL----------SYLTGG------MGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDG-------FGPLLTGFV-VGANILAGGAFSGASMNPARSFGPALVSGN--WTDHWVYWVGPLI 219          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.382e-11
Identity = 50/173 (28.90%), Postives = 80/173 (46.24%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            ISGGH+NP V+F  A+ G  +      Y +AQ +G     L LK V   K             +   G  G+ E+     + + +EI+ +F  ++     A D ++  +LG +   I IG ++G        + A   ++G  +NPAR  GPA+  G   +  +WV+W GP I
Sbjct:   77 ISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKA------------IPTHGVAGISEL-----EGVVMEIVITFALVYTVYATAADPKKG-SLGTIAP-IAIGFIVG------ANILAAGPFSGGSMNPARSFGPAVAAGN--FAGNWVYWVGPLI 222          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: NIP33_ORYSJ (Aquaporin NIP3-3 OS=Oryza sativa subsp. japonica GN=NIP3-3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.382e-11
Identity = 66/261 (25.29%), Postives = 111/261 (42.53%), Query Frame = 1
Query:   82 LMDEEKKQNPSTWKKILGFEDIF--SVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEI-GLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVA 855
            L DE ++Q  S W   LG   I   SV + +   AE  GT +L+F + + +I   Q  +    L ++                ISG H+NP +S A A+ G    +    YI +Q +G +  + A+K +                    P   G+V +  +GT +A ++E I +F  LF    +A D    K L    + + +G  + + + V+   T      GA +NPAR +G A+  G   + + WV+     +  +A
Sbjct:   42 LSDETQQQ--SLWH--LGLRKIIPSSVPLLKKVSAEFFGTFILIFTVLSTIIMDEQHKSIETLLGIATSAGLAVTVLVLSLIHISGCHLNPAISIAMAVFGHLPSAHLLPYISSQILGAVAASFAVKGLYH------------------PVNPGIVTVPNVGTVEAFFVEFIITFFLLFIITALATDPNAVKEL----IAVAVGATVMMNILVAGPST------GASMNPARTIGAAIATG--RYTQIWVYLVATPLGAIA 268          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: NIP31_ORYSJ (Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.382e-11
Identity = 58/185 (31.35%), Postives = 82/185 (44.32%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFA-LYTKV 876
            ISG H+NP ++ A A      + +   Y+  Q +G I    ALK V      H F  GG    V VP P       + T QA + E I +F  LF    +A D+R    L  + V   +   L +L+   TT        G  +NP R LGPA+  G   + + W++   P +  VA A +YT V
Sbjct:  136 ISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSICAGFALKGVF-----HPFLSGG----VTVPDPT------ISTAQAFFTEFIITFNLLFVVTAVATDTRAVGELAGIAVGAAV--TLNILIAGPTT--------GGSMNPVRTLGPAVAAGN--YRQLWIYLIAPTLGAVAGAGVYTAV 293          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.382e-11
Identity = 56/182 (30.77%), Postives = 78/182 (42.86%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALY 867
            ISG H+NP VSF   + G         Y++AQ +G I  A  +  + + K     S G  +       P G   +G G       E++ + +FL   +  A D+R           I IG  L L+  +S  VT         +NPAR  GPAL  GG    + W+FW  P I A +  ALY
Sbjct:   58 ISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYT-LGAG----FVSEVVMTAMFLVV-IMGATDARAPAGFAP----IAIGLALTLIHLISIPVT------NTSVNPARSTGPALFVGGWALQQLWLFWVAPLIGAAIGGALY 223          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: NIP71_ARATH (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana GN=NIP7-1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.110e-11
Identity = 72/287 (25.09%), Postives = 123/287 (42.86%), Query Frame = 1
Query:   79 RLMDEEKKQNPSTWK--------KILGFEDI-FSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRH--WVFWAGPAIACV-------AFALYTKVIPS 885
            R++D+E    PST +        ++ G       +   R  MAEL+GT +L+F++  ++ S+  +      L  +                ISG H+NP ++ A A+ G   +S+  +YI AQ +G     L              S+ G   +++   P       L    A ++E+I + + +F +   A      + LG +T   VIGTV+ L V ++  +      +G  +NPAR LGPA+V     WD    W++   P I  +       + +L T+  PS
Sbjct:    8 RVVDQEAGSTPSTLRDEDHPSRQRLFGCLPYDIDLNPLRIVMAELVGTFILMFSVCGVISSTQLSGGHVGLLEYAVTAGLSVVVVVYSIGHISGAHLNPSITIAFAVFGGFPWSQVPLYITAQTLGATAATLV-----------GVSVYGVNADIMATKP------ALSCVSAFFVELIATSIVVFLA--SALHCGPHQNLGNLT-GFVIGTVISLGVLITGPI------SGGSMNPARSLGPAVV----AWDFEDLWIYMTAPVIGAIIGVLTYRSISLKTRPCPS 264          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: NIP11_ARATH (Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.110e-11
Identity = 69/284 (24.30%), Postives = 119/284 (41.90%), Query Frame = 1
Query:   16 DIEGEYGGNRVQPFATPKQEQRLMDEEKKQNPSTWKKILGFEDIFSVKV--WRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFA 861
            DI G   GN  +       +  +  +++ ++    + +   + + SV V   +  +AE LGT  LVF     V+ ++Q D       ++                ISG HINP V+ A A  G     +   Y+++Q +G    A  L+ +    + H+   G   + +      G   +G    QA  +E I +F  +F    +A D+R   A+G +      G  +G  V ++  + A    + A +NP R LGPALV G   +   W++   P +  +A A
Sbjct:    3 DISGNGYGNAREEVVMVNLKDEVEHQQEMEDIHNPRPLKKQDSLLSVSVPFLQKLIAEFLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLF--GLDHDVCSGKHDVFI------GSSPVG-SDLQAFTMEFIVTFYLMFIISGVATDNR---AIGELA-----GLAIGSTVLLNVLIAAP--VSSASMNPGRSLGPALVYG--CYKGIWIYLVAPTLGAIAGA 265          
The following BLAST results are available for this feature:
BLAST of DY262747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
TIP43_MAIZE1.069e-1128.19Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
AQPZ2_RHIME1.069e-1130.81Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
TIP51_ORYSJ2.382e-1129.08Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
TIP41_ARATH2.382e-1131.21Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
TIP21_ORYSJ2.382e-1128.90Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
NIP33_ORYSJ2.382e-1125.29Aquaporin NIP3-3 OS=Oryza sativa subsp. japonica G... [more]
NIP31_ORYSJ2.382e-1131.35Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica G... [more]
AQPZ_PSEPK2.382e-1130.77Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
NIP71_ARATH3.110e-1125.09Probable aquaporin NIP7-1 OS=Arabidopsis thaliana ... [more]
NIP11_ARATH3.110e-1124.30Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262747 ID=DY262747; Name=DY262747; organism=Citrus clementina; type=EST; length=1028bp
TCGGAACTGGCCGGTGATATAGAGGGTGAATATGGTGGTAACAGAGTCCA
GCCTTTTGCTACACCAAAGCAAGAGCAGAGACTGATGGATGAAGAGAAGA
AACAGAATCCCTCCACATGGAAAAAGATTTTGGGATTTGAAGACATTTTT
TCTGTGAAAGTGTGGAGAGCATCAATGGCTGAGCTGCTTGGTACAGCAGT
GCTGGTTTTTGCACTGGACACAATTGTCATTTCCTCCATTCAAACAGACA
CAAAGACCCCAAATCTTGTAATGTCAACTTTGGTCGCAATCACAATAACA
ATCCTCCTACTTGCAACTTTTCCAATTTCTGGTGGCCACATCAACCCATT
AGTGTCCTTTGCTGCAGCACTCACTGGCATCGCGTCCTTCTCAAGGGCAG
CCATATACATTTTGGCTCAATGTGTTGGTGGCATTTTCGGTGCACTAGCG
CTGAAAGCTGTGGTGACCAACAAAATTGCACATAATTTTTCACTTGGAGG
CTGCACCCTGAATGTTGTGGTACCTGGGCCAGATGGGCTTGTTGAGATCG
GCTTGGGGACTAGGCAGGCCCTTTGGCTTGAGATAATTTGCTCGTTTGTG
TTCCTTTTTGCTTCTGTGTGGATGGCTTTTGACTCCAGACAAGCCAAGGC
TCTTGGCAGAGTTACCGTATGCATTGTCATTGGAACAGTGTTGGGTCTTC
TGGTTTTTGTCTCGACAACTGTTACTGCTCAAAAGGGCTATGCCGGAGCT
GGGCTCAACCCGGCAAGATGTTTGGGCCCAGCACTCGTTAGAGGAGGCCA
TCTCTGGGATCGCCACTGGGTTTTCTGGGCCGGGCCGGCTATCGCTTGCG
TGGCATTTGCTTTGTACACTAAGGTCATTCCAAGTCAGAATTTGCACACC
ATCAAGTGATGTAGCTTGAAATTCAATCACCCTTTATTGGCTTCTTAGGA
TTAATTTGAAGGTGTTTCATGTTTTTANGGGATTAAAAAAGTGAAATATC
TATTGAAAATTATATTTTATTGTCTAAT
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