DY262747

Overview
NameDY262747
Unique NameDY262747
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1028
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig995 contig Ccv1_Contig995:34..1061. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.852e-18
Identity = 76/258 (29.46%), Postives = 115/258 (44.57%), Query Frame = 1
Query:  139 EDIFSVKVWRASMAELLGTAVLVF-ALDTIVISSIQTDTKTPN---------LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            +++    ++RA++AE + T + ++  + TI+    Q+DTK P          L ++                ISGGHINP V+F   L    S  RA +Y++AQC G I GA   K     K  +N   GG             V  G     AL  EII +FV ++ +V+ A D ++      V V   +   +G  VF+    T      G G+NPAR  GPA++      WD  W++W GP +     A+Y + I
Sbjct:   31 DELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGF--QKSFYNRYGGGV----------NTVSDGYNKGTALGAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--VTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYI 271          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.852e-18
Identity = 73/245 (29.80%), Postives = 104/245 (42.45%), Query Frame = 1
Query:  121 KKILGFEDIFSVK-VWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACV 852
            KKI+G +DI   K +WR   AEL+GT +LV  + T   + +Q       + ++                +SG HINP V+    +TG  S  +A  YI+ QCVG I G+  LK +   +      +      V  P                 +E   +FV +     +  D R  K LG     + +G     L      + A K Y G+ +NPAR  GPA V G   W  HWV+WAGP +  V
Sbjct:   11 KKIIGIDDITDTKTIWRCLAAELIGTLLLVL-IGTGSCTGVQISEGDVVVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGTLCMTSLAPGVTPP-------------MGFLVEACITFVLILLVQSVCDDRR--KNLGNAAP-VAVG-----LAITCCHLAAIK-YTGSSMNPARSFGPA-VNGDDNWANHWVYWAGPIVGGV 231          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.643e-18
Identity = 62/192 (32.29%), Postives = 90/192 (46.88%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVIPSQNLH 897
            ISGGH+NP V+F A + G  S  +A +Y +AQ +G +   L LK          FSL                  G+G   A+  EI+ +F  ++     A D ++   LG V   I IG ++G        + A   + GA +NPA   GPA+V G  +WD HWV+W GP + A +A  +Y  +   Q  H
Sbjct:   79 ISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSA----------------GVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGD-LG-VIAPIAIGFIVG------ANILAGGAFDGASMNPAVSFGPAVVTG--VWDNHWVYWLGPFVGAAIAALIYDIIFIGQRPH 244          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.643e-18
Identity = 65/186 (34.95%), Postives = 89/186 (47.85%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGH-LWDRHWVFWAGPAIACVAFALYTKVI 879
            ISGGHINP V+F   L    S  RA  Y++AQC+G I G   +KA +         LGG             V  G  T  AL  EII +FV ++ +V+ A D +++     V V   +   +G  VF+    T      G G+NPAR  G A++      WD HW+FW GP +  +A A Y + I
Sbjct:   92 ISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKR---LGGGA---------NTVADGYSTGTALGAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYI 260          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.643e-18
Identity = 73/251 (29.08%), Postives = 112/251 (44.62%), Query Frame = 1
Query:  142 DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXF---PISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ++ S   +RA +AE + T + ++     V+   ++ +K   + +               +    ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K          F  G   L +   G   +V  G      L  EI+ +F+     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H W+ HW+FW GP +     A+Y +VI
Sbjct:   47 ELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVK---------GFQQG---LYMGNGGGANVVASGYTKGDGLGAEIVGTFIL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVI 279          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 7.643e-18
Identity = 76/260 (29.23%), Postives = 114/260 (43.85%), Query Frame = 1
Query:  121 KKILGFEDIFSVK-VWRASMAELLGTAVLVFALDTIVISSIQT--DTKTPNLVMSXXXXXXXXXXXXXXFP-ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI----ACVAFALYTKV 876
            K+++G  DI   + +WR  +AE LGT  LV    +I I S         P +                 F  +SG HINP V+    +T   S  + A YI++QCVG I GA  +KA   + +     +GG  +  + P         L   Q + +E + +F+ +F  V    D+R++   G   + I +    G L  +         Y GA +NPAR  GPA+V G   W   WV+W GP +    A   + L+ KV
Sbjct:    8 KQLVGVADITENRNIWRMLVAEFLGTFFLV----SIGIGSTMGWGGDYAPTMTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDV-----IGGLGVTGIDP--------RLTAGQGVMIEALITFILVFV-VHGVCDNRRSDIKGSAPLAIGLSITAGHLSAIK--------YTGASMNPARSFGPAVVMGN--WTDQWVYWVGPIVGGILAGAVYRLFFKV 239          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 9.983e-18
Identity = 74/257 (28.79%), Postives = 113/257 (43.97%), Query Frame = 1
Query:  124 KILGFEDIF-SVKVWRASMAELLGTAVLVFA-LDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGP----AIACVAFALYTKV 876
            K +G  DI  + K+WR  + EL+GT  L+F  + +    S+     T  L ++                +SG HINP V+    + G  S  +AA YI+ QCVG I GA  +K  +         + G  L V    P       L   QA+ +E + +F+ +F  V    D  +    G   + + +    G L  +          +GA +NPAR  GPA+V+G  +W  HWV+W GP     +A + + L  KV
Sbjct:    9 KFVGVADITENKKIWRMLLGELVGTFFLIFVGVGSTTSGSVPQIAFTFGLTVATIAQGLGH--------LSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALD-------GVAGGDLGVSSFDP------SLNCAQAVLIEALITFILVFV-VKAVSDPGRQDIKGSAPLAVGLAIAAGHLCAIK--------LSGASMNPARSFGPAVVQG--VWTYHWVYWVGPIAGGLLAGIIYRLIFKV 233          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.703e-17
Identity = 74/250 (29.60%), Postives = 111/250 (44.40%), Query Frame = 1
Query:  166 RASMAELLGTAVLVFA-LDTIVISSIQTD----TKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGP-AIACVAFALYTKVIPSQNLH 897
            +A++AE + T + VFA   + +  S  TD    T    +  S                ISGGH+NP V+F A + G  S  +A +Y +AQ +G +   L LK          FSL                  G+G   A+ LE++ +F  ++     A D ++   LG V   I IG ++G        + A   + GA +NPA   GPA+V G  +W+ HWV+W GP A A +A  +Y  +   Q  H
Sbjct:   21 KAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSA----------------GVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGD-LG-VIAPIAIGFIVG------ANILAGGAFDGASMNPAVSFGPAVVTG--VWENHWVYWVGPLAGAAIAALVYDIIFIGQRPH 244          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.703e-17
Identity = 79/261 (30.27%), Postives = 118/261 (45.21%), Query Frame = 1
Query:  136 FEDIFSVKVW---RASMAELLGTAVLVF-ALDTIVISSIQTDTKTPN--------LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            F D   +K W   RA +AE + T + ++  + T++   IQ+DT            L ++                ISGGHINP V+F   L    S  RA +YI+AQC+G I G   +KA    + ++    GG        G + L + G  T   L  EII +FV ++ +V+ A D +++     V V   +   +G  VF+    T      G G+NPAR  G A++      WD HW+FW GP I     A Y + +
Sbjct:   26 FIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAF---QSSYYTRYGG--------GANSLAD-GYSTGTGLAAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFV 269          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.904e-17
Identity = 74/259 (28.57%), Postives = 116/259 (44.79%), Query Frame = 1
Query:  139 EDIFSVKVWRASMAELLGTAVLVFALDT--IVISSIQTD-TKTPN--LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVIPSQNLH 897
            E+++     RA++AE + T + VFA     I  + I  +   TP+  +  +                ISGGH+NP V+F   L G  +  R  +Y +AQ +G +     L          +F+ GG       P P   +  G+G+  AL  EI+ +F  ++     A D +   +LG +   I IG ++G        + A   ++GA +NPA   GPA+V     W  HWV+WAGP I   +A  +Y  V   +N H
Sbjct:   13 EEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLL----------SFATGG------EPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNG-SLGTIAP-IAIGFIVG------ANILAGGAFSGASMNPAVAFGPAVV--SWTWTNHWVYWAGPLIGGGLAGIIYDFVFIDENAH 245          
The following BLAST results are available for this feature:
BLAST of DY262747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
PIP27_MAIZE5.852e-1829.46Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
AQP_CICVR5.852e-1829.80Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
TIP12_ORYSJ7.643e-1832.29Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
PIP28_ARATH7.643e-1834.95Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP11_ORYSJ7.643e-1829.08Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
AQP_AEDAE7.643e-1829.23Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP_DROME9.983e-1828.79Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
TIP12_MAIZE1.703e-1729.60Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
PIP21_ARATH1.703e-1730.27Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
TIP12_ARATH2.904e-1728.57Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262747 ID=DY262747; Name=DY262747; organism=Citrus clementina; type=EST; length=1028bp
TCGGAACTGGCCGGTGATATAGAGGGTGAATATGGTGGTAACAGAGTCCA
GCCTTTTGCTACACCAAAGCAAGAGCAGAGACTGATGGATGAAGAGAAGA
AACAGAATCCCTCCACATGGAAAAAGATTTTGGGATTTGAAGACATTTTT
TCTGTGAAAGTGTGGAGAGCATCAATGGCTGAGCTGCTTGGTACAGCAGT
GCTGGTTTTTGCACTGGACACAATTGTCATTTCCTCCATTCAAACAGACA
CAAAGACCCCAAATCTTGTAATGTCAACTTTGGTCGCAATCACAATAACA
ATCCTCCTACTTGCAACTTTTCCAATTTCTGGTGGCCACATCAACCCATT
AGTGTCCTTTGCTGCAGCACTCACTGGCATCGCGTCCTTCTCAAGGGCAG
CCATATACATTTTGGCTCAATGTGTTGGTGGCATTTTCGGTGCACTAGCG
CTGAAAGCTGTGGTGACCAACAAAATTGCACATAATTTTTCACTTGGAGG
CTGCACCCTGAATGTTGTGGTACCTGGGCCAGATGGGCTTGTTGAGATCG
GCTTGGGGACTAGGCAGGCCCTTTGGCTTGAGATAATTTGCTCGTTTGTG
TTCCTTTTTGCTTCTGTGTGGATGGCTTTTGACTCCAGACAAGCCAAGGC
TCTTGGCAGAGTTACCGTATGCATTGTCATTGGAACAGTGTTGGGTCTTC
TGGTTTTTGTCTCGACAACTGTTACTGCTCAAAAGGGCTATGCCGGAGCT
GGGCTCAACCCGGCAAGATGTTTGGGCCCAGCACTCGTTAGAGGAGGCCA
TCTCTGGGATCGCCACTGGGTTTTCTGGGCCGGGCCGGCTATCGCTTGCG
TGGCATTTGCTTTGTACACTAAGGTCATTCCAAGTCAGAATTTGCACACC
ATCAAGTGATGTAGCTTGAAATTCAATCACCCTTTATTGGCTTCTTAGGA
TTAATTTGAAGGTGTTTCATGTTTTTANGGGATTAAAAAAGTGAAATATC
TATTGAAAATTATATTTTATTGTCTAAT
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