DY262747

Overview
NameDY262747
Unique NameDY262747
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1028
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.904e-17
Identity = 75/257 (29.18%), Postives = 118/257 (45.91%), Query Frame = 1
Query:  139 EDIFSVKVWRASMAELLGTAVLVF-ALDTIVISSIQTDTKTPN--------LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            +++    ++RA +AE + T + ++  + T++   IQ+DTK           L ++                ISGGHINP V+F   L    S  RA +Y++AQC+G I G   +KA    + ++    GG        G + L + G  T   L  EII +FV ++ +V+ A D ++      V V   +   +G  VF+    T      G G+NPAR  G A++      WD HW+FW GP I     A Y + +
Sbjct:   28 DELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAF---QSSYYDRYGG--------GANSLAD-GYNTGTGLAAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFV 267          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.793e-17
Identity = 60/174 (34.48%), Postives = 84/174 (48.28%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQA-KALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            +SGGHINP V+   A  G  +  R+A+Y  AQ +G     L L A+   + A         + V  P P      G+G  +A+ +E + +F  LFA      D R+A  ALG + V +V+G            + A   Y+GA +NPAR  GPAL  G   W  HW++W GP I
Sbjct:   76 VSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEA---------VPVHAPAP------GVGAARAVAMEAVLTFSLLFAVYATVVDRRRAVGALGPLLVGLVVG----------ANILAGGPYSGASMNPARSFGPALAAGE--WADHWIYWVGPLI 222          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.793e-17
Identity = 75/260 (28.85%), Postives = 116/260 (44.62%), Query Frame = 1
Query:  136 FEDIFSVKVWRASMAELLGTAVLVFAL--DTIVISSIQTDTK--TPNLV-MSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVIPSQNLH 897
            F+D FS+   RA +AE + T + VFA     I  + + +D    TP LV ++                ISGGH+NP V+F  A+ G  +      Y +AQ +G       LK V           GG  +      P   V  GLG+ + + +EII +F  ++     A D ++  +LG +   + IG ++G        + A   ++G  +NPAR  GPA+  G   +  HWV+W GP I   +A  +Y  V    + H
Sbjct:    9 FDDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVT----------GGLAV------PTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKG-SLGTIAP-LAIGLIVG------ANILAAGPFSGGSMNPARSFGPAVAAGD--FSGHWVYWVGPLIGGGLAGLIYGNVFMGSSEH 242          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.793e-17
Identity = 78/282 (27.66%), Postives = 119/282 (42.20%), Query Frame = 1
Query:   49 QPFATPKQEQRLMDEEKKQNPSTWKKILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXF---PISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHL-WDRHWVFWAGPAIACVAFALYTKVI 879
            QP     Q Q   DE K         +    ++ S   +RA +AE + T + ++     V+  ++  +K   + +               +    ISGGHINP V+F   L    S +RA  Y++ Q +G I GA  +K     +   + + G    N V P        G      L  EI+ +F+     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A+V    + W+ HW+FW GP I     ALY +V+
Sbjct:   19 QPLGIAAQSQ---DEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGA---NFVAP--------GYTKGDGLGAEIVGTFIL----VYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVV 280          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.793e-17
Identity = 72/250 (28.80%), Postives = 108/250 (43.20%), Query Frame = 1
Query:  142 DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISG--GHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ++ S   +R  +AE + T + ++     V+   ++ +K   + +               +  +G  GHINP V+F   L    S +RA  YI+ QC+G I G   +K         N    G   NVV P        G      L  EI+ +F+     V+  F +  AK   R + V I+    +G  VF+    T   G  G G+NPAR LG A++    H W  HW+FW GP I     A+Y +VI
Sbjct:   46 ELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGISGHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGN----GGRRNVVAP--------GYTKGDGLGAEIVGTFIL----VYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLAT--MGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQVI 277          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 6.471e-17
Identity = 69/259 (26.64%), Postives = 111/259 (42.86%), Query Frame = 1
Query:  127 ILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVI------SSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGH-LWDRHWVFWAGPAIACVAFALYTKVI 879
            +L   ++    ++RA +AE + T + ++     VI      +++   T    L ++                +SGGHINP V+         S  R  +Y++AQC+G I GA  +K ++        +LGG             V  G     AL  EI+ +F+     V+  F +   K   R + + +++   +G  VFV    T      G G+NPAR LG A++   H  W  HW+FW GP I     A Y K++
Sbjct:   31 LLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYD---ALGGGA---------NTVSDGYSAAGALGAEIVGTFIL----VYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIP--ITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLV 271          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.471e-17
Identity = 68/251 (27.09%), Postives = 107/251 (42.63%), Query Frame = 1
Query:  142 DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXF---PISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGG-HLWDRHWVFWAGPAIACVAFALYTKVI 879
            ++ S   +RA +AE + T + ++     V+   ++ +K   + +               +    +SGGHINP V+F   L    S +RA  Y++ QC+G + GA  +KA             G  L     G    V  G      L  E++ +FV     V+  F +  AK   R + V  +    +G  VF+    T      G G+NPAR LG A++    H W  HW+FW GP       A+Y +V+
Sbjct:   52 ELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAF------------GSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVL----VYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQVV 284          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.451e-17
Identity = 70/234 (29.91%), Postives = 104/234 (44.44%), Query Frame = 1
Query:  166 RASMAELLGTAVLVFA-----LDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGA--LALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQA-KALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            RA +AEL+ T + VFA     + T  ++    DT      ++                +SGGHINP V+   A TG  +  R+A+Y+ AQ +G       LA  AV  + +                 P   +  G+G  + + +E + +F  LFA      D R+A   +G + V +V+G            V A   ++GA +NPAR  GPALV G  +W  HWV+W GP I
Sbjct:   19 RAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGV-----------------PVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRRAVGGMGPLLVGLVVG----------ANVLAGGPFSGASMNPARSFGPALVAG--VWADHWVYWVGPLI 223          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.451e-17
Identity = 62/186 (33.33%), Postives = 91/186 (48.92%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ISGGHINP V+F   L    +  RA +Y++AQC+G I G   +KA    + A+    GG        G +GL + G      +  EII +FV ++ +V+ A D +++     V V   +   +G  VF+    T      G G+NPAR LG A++      WD HW+FW GP       A Y + +
Sbjct:  100 ISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAF---QSAYFTRYGG--------GANGLSD-GYSIGTGVAAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPL--PIGFAVFIVHLATIP--ITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFV 268          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.451e-17
Identity = 71/245 (28.98%), Postives = 111/245 (45.31%), Query Frame = 1
Query:  139 EDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLV-MSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALY 867
            +++ S+   +A  AE L T + VF     + S+++  +  P ++ ++               P+SGGHINP ++ A  +    S  RA  Y++AQ VG I GA  L  +       N ++     N   PG            QA+ +E+I +F  L   ++ + DSR+   +G   + I +   LG LV +         + G  +NPAR  GPA+V        HWVFW GP + A VA  LY
Sbjct:    3 KEVCSLAFLKAVFAEFLATLIFVFFG---LASALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLAVNSLN-NNTTPG------------QAVVVEMILTFQ-LALCIFSSTDSRRTSPVGSPALSIGLSVTLGHLVGIY--------FTGCSMNPARSFGPAVVM-NRFSPSHWVFWVGPIVGAAVAAILY 221          
The following BLAST results are available for this feature:
BLAST of DY262747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
PIP22_ARATH2.904e-1729.18Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
TIP43_ORYSJ3.793e-1734.48Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]
TIP21_ARATH3.793e-1728.85Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
PIP2_PEA3.793e-1727.66Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP11_MAIZE3.793e-1728.80Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP27_ORYSJ6.471e-1726.64Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP16_MAIZE6.471e-1727.09Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
TIP44_MAIZE8.451e-1729.91Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
PIP25_ARATH8.451e-1733.33Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
AQP5_PIG8.451e-1728.98Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA100DD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262747 ID=DY262747; Name=DY262747; organism=Citrus clementina; type=EST; length=1028bp
TCGGAACTGGCCGGTGATATAGAGGGTGAATATGGTGGTAACAGAGTCCA
GCCTTTTGCTACACCAAAGCAAGAGCAGAGACTGATGGATGAAGAGAAGA
AACAGAATCCCTCCACATGGAAAAAGATTTTGGGATTTGAAGACATTTTT
TCTGTGAAAGTGTGGAGAGCATCAATGGCTGAGCTGCTTGGTACAGCAGT
GCTGGTTTTTGCACTGGACACAATTGTCATTTCCTCCATTCAAACAGACA
CAAAGACCCCAAATCTTGTAATGTCAACTTTGGTCGCAATCACAATAACA
ATCCTCCTACTTGCAACTTTTCCAATTTCTGGTGGCCACATCAACCCATT
AGTGTCCTTTGCTGCAGCACTCACTGGCATCGCGTCCTTCTCAAGGGCAG
CCATATACATTTTGGCTCAATGTGTTGGTGGCATTTTCGGTGCACTAGCG
CTGAAAGCTGTGGTGACCAACAAAATTGCACATAATTTTTCACTTGGAGG
CTGCACCCTGAATGTTGTGGTACCTGGGCCAGATGGGCTTGTTGAGATCG
GCTTGGGGACTAGGCAGGCCCTTTGGCTTGAGATAATTTGCTCGTTTGTG
TTCCTTTTTGCTTCTGTGTGGATGGCTTTTGACTCCAGACAAGCCAAGGC
TCTTGGCAGAGTTACCGTATGCATTGTCATTGGAACAGTGTTGGGTCTTC
TGGTTTTTGTCTCGACAACTGTTACTGCTCAAAAGGGCTATGCCGGAGCT
GGGCTCAACCCGGCAAGATGTTTGGGCCCAGCACTCGTTAGAGGAGGCCA
TCTCTGGGATCGCCACTGGGTTTTCTGGGCCGGGCCGGCTATCGCTTGCG
TGGCATTTGCTTTGTACACTAAGGTCATTCCAAGTCAGAATTTGCACACC
ATCAAGTGATGTAGCTTGAAATTCAATCACCCTTTATTGGCTTCTTAGGA
TTAATTTGAAGGTGTTTCATGTTTTTANGGGATTAAAAAAGTGAAATATC
TATTGAAAATTATATTTTATTGTCTAAT
back to top