DY262747

Overview
NameDY262747
Unique NameDY262747
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1028
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.104e-16
Identity = 73/253 (28.85%), Postives = 108/253 (42.69%), Query Frame = 1
Query:  139 EDIFSVKVWRASMAELLGTAVLVF-----------ALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFAL 864
            +++ SV  ++A  AE L T + VF           AL TI+  SI        L  +               P+SGGHINP ++ A  +    S  RA  Y+ AQ VG I GA  L  +       N ++   + N   PG            +A+ +E+I +F  L   ++ + DSR+   +G   + I +   LG LV +         + G  +NPAR  GPA+V        HWVFW GP +  V  A+
Sbjct:    3 KEVCSVAFFKAVFAEFLATLIFVFFGLGSALKWPSALPTILQISIAFGLAIGTLAQALG-------------PVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLAVNALS-NNTTPG------------KAVVVELILTFQ-LALCIFSSTDSRRTSPVGSPALSIGLSVTLGHLVGIY--------FTGCSMNPARSFGPAVVM-NRFSPSHWVFWVGPIVGAVLAAI 219          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.459e-16
Identity = 76/258 (29.46%), Postives = 114/258 (44.19%), Query Frame = 1
Query:  142 DIFSVKVWRASMAELLGTAVLVF-ALDTIVISSIQTDTKTPN----------LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ++ S  ++RA +AE + T + ++  + T++    QTD               L ++                ISGGHINP V+F   L    S  RA +YI+AQC+G I G   +KA    + A+    GG        G + L   G      L  EII +FV ++ +V+ A D ++      V V   +   +G  VF+    T      G G+NPAR LG A++      WD HW+FW GP +     A Y + I
Sbjct:   34 ELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAF---QSAYFDRYGG--------GANSLAS-GYSRGTGLGAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--VTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYI 274          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 3.211e-16
Identity = 66/186 (35.48%), Postives = 92/186 (49.46%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGH-LWDRHWVFWAGPAIACVAFALYTKVI 879
            ISGGHINP V+F   L    S  RA  Y++AQC+G I G   +KA +  K  +N   GG   N V  G         GT  AL  EII +FV ++ +V+ A D +++     + V   +   +G  VF+    T      G G+NPAR  G A++      WD  W+FW GP +  +A A Y + I
Sbjct:   94 ISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFM--KTPYNTLGGGA--NTVADG------YSKGT--ALGAEIIGTFVLVY-TVFSATDPKRSARDSHIPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYI 262          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.194e-16
Identity = 73/232 (31.47%), Postives = 101/232 (43.53%), Query Frame = 1
Query:  151 SVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPN-LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            S   WRA  AE  GT   VF     + +S++      N LV++                +SG HINP V+FA  +    S  RA  YI AQ +G + GA  L  V    I      G   LN + PG      + LG  QA  +EI  +  F+   ++  +D R+   LG V++ I     LG L  +         Y GA +NPAR   PA++     +  HWV+W GP I
Sbjct:    6 SFSFWRAVFAEFFGTMFYVFFG---LGASLKWAAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIR-----GNLALNTLHPG------VSLG--QATTVEIFLTLQFVLC-IFATYDERRNGRLGSVSLAIGFSLTLGHLFGLY--------YTGASMNPARSFAPAVLTRN--FTNHWVYWVGPII 210          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.478e-16
Identity = 71/241 (29.46%), Postives = 111/241 (46.06%), Query Frame = 1
Query:  160 VWRASMAELLGTAVLV-FALDTIVISSIQTDTKTPNLV-MSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRG---GHLWDRHWVFWAGPAIACVAFALY 867
            ++RA++AE   T +LV  ++ T++    Q+      ++ ++                ISGGH+NP V+FA  L    S  RAA+Y +AQCVG + GA   +A+        ++  G   N +  G       G G    +  E++ +FV ++ +V+ A D ++      V V   +   L +LV    T+       G G+NPAR LGPALV G      W   W+FW GP     A  +Y
Sbjct:   33 LYRAAIAEFTATLLLVCISVSTVIGEKRQSGEGGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAM---HGGGQYARHGGGANELAAG----YSAGAG----VVAEMVGTFVLVY-TVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIP----ITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIY 257          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.154e-16
Identity = 74/263 (28.14%), Postives = 116/263 (44.11%), Query Frame = 1
Query:  127 ILGFEDIFSVKVWRASMAELLGTAVLVF-ALDTIVISSIQTDTKTPN----------LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ++  E++    ++RA +AE + T + ++  + T++    QTD               L ++                ISGGHINP V+F   L    S  RA +YI+AQC+G I G   +K     + A+    GG        G + L + G      L  EII +FV ++ +V+ A D +++     V V   +   +G  VF+    T      G G+NPAR LG A++      WD  W+FW GP I     A Y + +
Sbjct:   28 LIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGF---QSAYYVRYGG--------GANELSD-GYSKGTGLAAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYV 273          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.154e-16
Identity = 68/243 (27.98%), Postives = 106/243 (43.62%), Query Frame = 1
Query:  139 EDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLV-MSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFAL 864
            +++ SV   +A  AE L T + VF     + S+++  +  P ++ ++               P+SGGHINP ++ A  +    S  RA  Y+ AQ VG I GA  L  V       N ++     N                 QA+ +E+I +F  L   ++ + DSR+   +G   + I +   LG LV +         + G  +NPAR  GPA+V        HWVFW GP +  V  A+
Sbjct:    3 KEVCSVAFLKAVFAEFLATLIFVFFG---LGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTT-------------QGQAMVVELILTFQ-LALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIY--------FTGCSMNPARSFGPAVVM-NRFSPAHWVFWVGPIVGAVLAAI 219          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 7.154e-16
Identity = 75/247 (30.36%), Postives = 109/247 (44.13%), Query Frame = 1
Query:  163 WRASMAELLGTAVLVF-------ALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVI 879
            WRA +AE L   + +F            V ++  +     N+ +S                ISG H+NP V+    L+   S  RA +YI+AQCVG I  A A+ + +T+ +  N SLG   LN + PG D        + Q L +EII   + L   V    D R+    G   + I     LG L+ +         Y G G+NPAR  G A++   H +  HWVFW GP I   +A  +Y  ++
Sbjct:   11 WRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIV-ATAILSGITSSLPGN-SLG---LNSLAPGVD--------SGQGLGIEII-GTLQLVLCVLATTDRRRRDLGGSAPLAIGFSVALGHLLAID--------YTGCGINPARSFGSAVIT--HNFQDHWVFWVGPFIGGALAVLIYDFIL 233          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 9.343e-16
Identity = 71/253 (28.06%), Postives = 107/253 (42.29%), Query Frame = 1
Query:  139 EDIFSVKVWRASMAELLGTAVLVF-----------ALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFAL 864
            +++ S+  ++A  AE L T + VF           AL TI+  SI        L  +               P+SGGHINP ++ A  +    S  RA  Y+ AQ VG I GA  L  +       N ++     N   PG            +A+ +E+I +F  L   ++ + DSR+   +G   + I +   LG LV +         + G  +NPAR  GPA+V        HWVFW GP +  +  A+
Sbjct:    3 KEVCSLAFFKAVFAEFLATLIFVFFGLGSALKWPSALPTILQISIAFGLAIGTLAQALG-------------PVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLAVNALN-NNTTPG------------KAMVVELILTFQ-LALCIFSSTDSRRTSPVGSPALSIGLSVTLGHLVGIY--------FTGCSMNPARSFGPAVVM-NRFSPSHWVFWVGPIVGAMLAAI 219          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 9.343e-16
Identity = 74/247 (29.96%), Postives = 110/247 (44.53%), Query Frame = 1
Query:  163 WRASMAELLGTAVLVF-------ALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVI 879
            WRA +AE L   + +F            + S+  T     N+ +S                ISG H+NP V+    L+   S  RA +YI+AQCVG I  A A+ + +T+ +  N SLG   LN + P        G+ + Q L +EII   + L   V    D R+    G   + I     LG L+ +         Y G G+NPAR  G +++   H +  HW+FW GP I A +A  +Y  ++
Sbjct:   11 WRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIV-ATAILSGITSSLPDN-SLG---LNALAP--------GVNSGQGLGIEII-GTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVALGHLLAID--------YTGCGINPARSFGSSVIT--HNFQDHWIFWVGPFIGAALAVLIYDFIL 233          
The following BLAST results are available for this feature:
BLAST of DY262747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
AQP5_MOUSE1.104e-1628.85Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
PIP21_MAIZE2.459e-1629.46Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP27_ARATH3.211e-1635.48Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
MIP_RANPI4.194e-1631.47Lens fiber major intrinsic protein OS=Rana pipiens... [more]
PIP28_ORYSJ5.478e-1629.46Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP24_MAIZE7.154e-1628.14Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
AQP5_HUMAN7.154e-1627.98Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP1_PIG7.154e-1630.36Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP5_RAT9.343e-1628.06Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP1_BOVIN9.343e-1629.96Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262747 ID=DY262747; Name=DY262747; organism=Citrus clementina; type=EST; length=1028bp
TCGGAACTGGCCGGTGATATAGAGGGTGAATATGGTGGTAACAGAGTCCA
GCCTTTTGCTACACCAAAGCAAGAGCAGAGACTGATGGATGAAGAGAAGA
AACAGAATCCCTCCACATGGAAAAAGATTTTGGGATTTGAAGACATTTTT
TCTGTGAAAGTGTGGAGAGCATCAATGGCTGAGCTGCTTGGTACAGCAGT
GCTGGTTTTTGCACTGGACACAATTGTCATTTCCTCCATTCAAACAGACA
CAAAGACCCCAAATCTTGTAATGTCAACTTTGGTCGCAATCACAATAACA
ATCCTCCTACTTGCAACTTTTCCAATTTCTGGTGGCCACATCAACCCATT
AGTGTCCTTTGCTGCAGCACTCACTGGCATCGCGTCCTTCTCAAGGGCAG
CCATATACATTTTGGCTCAATGTGTTGGTGGCATTTTCGGTGCACTAGCG
CTGAAAGCTGTGGTGACCAACAAAATTGCACATAATTTTTCACTTGGAGG
CTGCACCCTGAATGTTGTGGTACCTGGGCCAGATGGGCTTGTTGAGATCG
GCTTGGGGACTAGGCAGGCCCTTTGGCTTGAGATAATTTGCTCGTTTGTG
TTCCTTTTTGCTTCTGTGTGGATGGCTTTTGACTCCAGACAAGCCAAGGC
TCTTGGCAGAGTTACCGTATGCATTGTCATTGGAACAGTGTTGGGTCTTC
TGGTTTTTGTCTCGACAACTGTTACTGCTCAAAAGGGCTATGCCGGAGCT
GGGCTCAACCCGGCAAGATGTTTGGGCCCAGCACTCGTTAGAGGAGGCCA
TCTCTGGGATCGCCACTGGGTTTTCTGGGCCGGGCCGGCTATCGCTTGCG
TGGCATTTGCTTTGTACACTAAGGTCATTCCAAGTCAGAATTTGCACACC
ATCAAGTGATGTAGCTTGAAATTCAATCACCCTTTATTGGCTTCTTAGGA
TTAATTTGAAGGTGTTTCATGTTTTTANGGGATTAAAAAAGTGAAATATC
TATTGAAAATTATATTTTATTGTCTAAT
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