DY262747

Overview
NameDY262747
Unique NameDY262747
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1028
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.220e-15
Identity = 73/249 (29.32%), Postives = 104/249 (41.77%), Query Frame = 1
Query:  166 RASMAELLGTAVLVFALDT--IVISSIQTD---TKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFALYTKVIPSQNLH 897
            +A +AE + T + VFA     I  + +  D   T    +  S                ISGGH+NP V+F A + G  +  R  +YI+AQ +G I  A AL   VT      F L                  G+G   AL LEI+ +F  ++     A D ++      +   I IG ++G  + V    T      GA +NPA   GPA+V     W  HWV+WAGP I      L  +V+   + H
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIV-ASALLVFVTASSVPAFGLSE----------------GVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNI--GIIAPIAIGFIVGANILVGGAFT------GASMNPAVSFGPAVVSWS--WSNHWVYWAGPLIGGGIAGLVYEVLFINSTH 242          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.220e-15
Identity = 55/173 (31.79%), Postives = 83/173 (47.98%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            ISGGH+NP V+F A + G  +  R  +Y +AQ +G +   L LK          F+ GG  +      P   +  G+G   A   EI+ +F  ++     A D +   +LG +   I IG ++G        + A   ++GA +NPA   GPA+V     W  HWV+WAGP +
Sbjct:   79 ISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK----------FATGGLAV------PAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNG-SLGTIAP-IAIGFIVG------ANILAGGAFSGASMNPAVAFGPAVV--SWTWTNHWVYWAGPLV 225          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.220e-15
Identity = 74/261 (28.35%), Postives = 113/261 (43.30%), Query Frame = 1
Query:  139 EDIFSVKVWRASMAELLGTAVLVF-ALDTIVISSIQTDTKTPN----------LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWL--EIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            E++    ++RA +AE + T + ++  + T++    QTD               L ++                +SGGHINP V+F   L    S  RA +YI+AQC+G I G   +K     + A     GG           G  E+  G  +   L  EII +FV ++ +V+ A D ++      V V   +   +G  VF+    T      G G+NPAR LG A++      WD HW+FW GP I     A Y + +
Sbjct:   28 EELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGF---QSAFYVRYGG-----------GANELSAGYSKGTGLAAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQYV 269          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.220e-15
Identity = 63/186 (33.87%), Postives = 89/186 (47.85%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ISGGHINP V+F   L    S  RA +Y++AQC+G + G   +KA    + A+    GG        G + L   G      L  EI+ +FV ++ +V+ A D ++      V V   +   +G  VF+    T      G G+NPAR LG A+V      WD HW+FW GP +     A Y + I
Sbjct:  108 ISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAF---QSAYFDRYGG--------GANSLAS-GYSRGAGLGAEIVGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--VTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYI 276          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 1.220e-15
Identity = 75/246 (30.49%), Postives = 110/246 (44.72%), Query Frame = 1
Query:  163 WRASMAELLGTAVLVF-----ALD-TIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVI 879
            WRA +AE L T + VF     AL     + + QT  +  N+ +S                ISG H+NP V+    L+   S  RA +YI+AQCVG I     L  + +       SL G +L     G + L + G+ + Q L +EII   + L   V    D R+    G   + I +   LG L+ +         Y G G+NPAR  G A++   H +  HW+FW GP I   +A  +Y  ++
Sbjct:   11 WRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQD-NVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITS-------SLTGNSL-----GRNDLAD-GVNSGQGLGIEII-GTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAID--------YTGCGINPARSFGSAVIT--HNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.594e-15
Identity = 73/263 (27.76%), Postives = 112/263 (42.59%), Query Frame = 1
Query:  127 ILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPN-----------LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ++  E++    ++RA +AE + T + ++     VI        T N           L ++                ISGGHINP V+F   L    S  RA +YI+AQC+G I G   +K   ++  A     GG        G + L + G      L  EII +FV ++ +V+ A D ++      + V   +   +G  VF+    T      G G+NPAR LG A++      WD  W+FW GP I     A Y + +
Sbjct:   28 LIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYAR---YGG--------GANELSD-GYSKGTGLGAEIIGTFVLVY-TVFSATDPKRNARDSHIPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYV 273          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.594e-15
Identity = 57/173 (32.95%), Postives = 83/173 (47.98%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            ISG H+NP V+FA  +    S  RA  Y++AQ +G + GA  L +V    +      G   LN + PG    V +G    QA  +EI  +  F+   ++  +D R+   LG V + +     LG L  +         Y GAG+NPAR   PA++     +  HWV+W GP I
Sbjct:   62 ISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVR-----GNLALNTLHPG----VSVG----QATIVEIFLTLQFVLC-IFATYDERRNGRLGSVALAVGFSLTLGHLFGMY--------YTGAGMNPARSFAPAILTRN--FTNHWVYWVGPVI 210          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.594e-15
Identity = 73/243 (30.04%), Postives = 114/243 (46.91%), Query Frame = 1
Query:  163 WRASMAELLGTAVLVF-----ALD---TIVISSIQTDTKTPNLV-MSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFAL 864
            WRA +AE L   + VF     AL     I   + QT  ++ ++V +S                +SG H+NP V+    L+   S  +A +YI+AQC+G +  A A+ + +T+ + +N SLG   LN + P        G+   Q L +EI+ +F  +   V +  D R+    G V + I +   LG L+ +         Y G G+NPAR  G A++     +  HW+FW GP I   A A+
Sbjct:   11 WRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVV-ATAILSGITSGLENN-SLG---LNGLSP--------GVSAGQGLGVEILVTFQLVLCVVAVT-DRRRHDVSGSVPLAIGLSVALGHLIAID--------YTGCGMNPARSFGSAVLTKNFTY--HWIFWVGPMIGGAAAAI 229          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.594e-15
Identity = 72/254 (28.35%), Postives = 111/254 (43.70%), Query Frame = 1
Query:  142 DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVI--PSQNL 894
            ++ S+   RA +AE L T + VF      ++  Q       + M+                +SG HINP V+ A  +    SF RA  Y+ AQ +G + GA  L  +    I  + ++     N                 QA+ +E+  + + L   ++ + D R+ K LG   + I     LG L+ +         Y G  +NPAR L PA+V G   +D HWVFW GP + A VA  LY  V+  P+++L
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLAIGTLVQALGH--VSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNALNNNST-------------AGQAVTVELFLT-LQLVLCIFPSTDKRRGKQLGHPALSIGFSVALGHLLGIH--------YTGCSMNPARSLAPAIVTG--KFDDHWVFWIGPLVGAIVASLLYNYVLFPPAKSL 230          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.594e-15
Identity = 74/248 (29.84%), Postives = 110/248 (44.35%), Query Frame = 1
Query:  163 WRASMAELLGTAVLVF-------ALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALG-RVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVI 879
            WRA +AE L   + +F            + S+  T     N+ +S                ISG H+NP V+    L+   S  RA +YI+AQCVG I   + L   +T+ +  N SLG   LN + P        G+ + Q L +EII   + L   V    D R+ + LG    + I     LG L+ +         Y G G+NPAR  G +++   H +  HW+FW GP I A +A  +Y  ++
Sbjct:   11 WRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSG-ITSSLPDN-SLG---LNALAP--------GVNSGQGLGIEII-GTLQLVLCVLATTDRRRRRDLGDSGPLAIGFSVALGHLLAID--------YTGCGINPARSFGSSVIT--HNFQDHWIFWVGPFIGAALAVLIYDFIL 234          
The following BLAST results are available for this feature:
BLAST of DY262747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
TIP1_MEDTR1.220e-1529.32Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP11_ARATH1.220e-1531.79Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
PIP25_MAIZE1.220e-1528.35Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP22_MAIZE1.220e-1533.87Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
AQP1_HUMAN1.220e-1530.49Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
PIP22_ORYSJ1.594e-1527.76Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
MIP_SHEEP1.594e-1532.95Lens fiber major intrinsic protein OS=Ovis aries G... [more]
AQPA_RANES1.594e-1530.04Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP2_SHEEP1.594e-1528.35Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP1_SHEEP1.594e-1529.84Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262747 ID=DY262747; Name=DY262747; organism=Citrus clementina; type=EST; length=1028bp
TCGGAACTGGCCGGTGATATAGAGGGTGAATATGGTGGTAACAGAGTCCA
GCCTTTTGCTACACCAAAGCAAGAGCAGAGACTGATGGATGAAGAGAAGA
AACAGAATCCCTCCACATGGAAAAAGATTTTGGGATTTGAAGACATTTTT
TCTGTGAAAGTGTGGAGAGCATCAATGGCTGAGCTGCTTGGTACAGCAGT
GCTGGTTTTTGCACTGGACACAATTGTCATTTCCTCCATTCAAACAGACA
CAAAGACCCCAAATCTTGTAATGTCAACTTTGGTCGCAATCACAATAACA
ATCCTCCTACTTGCAACTTTTCCAATTTCTGGTGGCCACATCAACCCATT
AGTGTCCTTTGCTGCAGCACTCACTGGCATCGCGTCCTTCTCAAGGGCAG
CCATATACATTTTGGCTCAATGTGTTGGTGGCATTTTCGGTGCACTAGCG
CTGAAAGCTGTGGTGACCAACAAAATTGCACATAATTTTTCACTTGGAGG
CTGCACCCTGAATGTTGTGGTACCTGGGCCAGATGGGCTTGTTGAGATCG
GCTTGGGGACTAGGCAGGCCCTTTGGCTTGAGATAATTTGCTCGTTTGTG
TTCCTTTTTGCTTCTGTGTGGATGGCTTTTGACTCCAGACAAGCCAAGGC
TCTTGGCAGAGTTACCGTATGCATTGTCATTGGAACAGTGTTGGGTCTTC
TGGTTTTTGTCTCGACAACTGTTACTGCTCAAAAGGGCTATGCCGGAGCT
GGGCTCAACCCGGCAAGATGTTTGGGCCCAGCACTCGTTAGAGGAGGCCA
TCTCTGGGATCGCCACTGGGTTTTCTGGGCCGGGCCGGCTATCGCTTGCG
TGGCATTTGCTTTGTACACTAAGGTCATTCCAAGTCAGAATTTGCACACC
ATCAAGTGATGTAGCTTGAAATTCAATCACCCTTTATTGGCTTCTTAGGA
TTAATTTGAAGGTGTTTCATGTTTTTANGGGATTAAAAAAGTGAAATATC
TATTGAAAATTATATTTTATTGTCTAAT
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