DY262747

Overview
NameDY262747
Unique NameDY262747
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1028
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.081e-15
Identity = 63/186 (33.87%), Postives = 89/186 (47.85%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ISGGHINP V+F   L    S  RA +YI+AQC+G I G   +K     + A+    GG        G + L + G      L  EII +FV ++ +V+ A D +++     V V   +   +G  VF+    T      G G+NPAR LG A++      WD  W+FW GP I     A Y + +
Sbjct:  106 ISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGF---QSAYYVRYGG--------GANELSD-GYSKGTGLAAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYV 274          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.081e-15
Identity = 72/258 (27.91%), Postives = 111/258 (43.02%), Query Frame = 1
Query:  142 DIFSVKVWRASMAELLGTAVLVF-ALDTIVISSIQTDTKTPN----------LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ++ S  ++RA +AE + T + ++  + T++    QTD               L ++                ISGGHINP V+F   L    S  RA +YI+AQC+G I G   +KA   +   + +  G  TL             G      L  EII +FV ++ +V+ A D ++      V V   +   +G  VF+    T      G G+NPAR +G A++      W  HW+FW GP +     A Y + I
Sbjct:   34 ELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKA-FQSAYFNRYGGGANTL-----------AAGYSKGTGLAAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYI 274          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.081e-15
Identity = 78/277 (28.16%), Postives = 128/277 (46.21%), Query Frame = 1
Query:   67 KQEQRLMDEEKKQNPSTWKKILGF-EDIFSVKVWRASMAELLGTAVLVFA-LDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIF--GALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFALYTKVIPS 885
            ++E   M+E    + S     +GF   +  V + +  +AE +GT  ++FA   ++ ++ I      P + ++                ISG H NP V+   ++ G   + +  +YI+AQ +G I   G LAL   VT +                    G V +G    Q+L +EII SF+ +F    +A D R   A+G+V   I +G  + L VFV+  +      +GA +NPAR +GPA+V+  H++   WV+  GP I  +A A    +I S
Sbjct:    9 EEEISQMEEGNIHSASNSDSNVGFCSSVSVVVILQKLIAEAIGTYFVIFAGCGSVAVNKIYGSVTFPGICVTWGLIVMVMVYTVGY--ISGAHFNPAVTITFSIFGRFPWKQVPLYIIAQLMGSILASGTLALLFDVTPQAYF-----------------GTVPVG-SNGQSLAIEIIISFLLMFVISGVATDDR---AIGQV-AGIAVGMTITLNVFVAGPI------SGASMNPARSIGPAIVK--HVYTGLWVYVVGPIIGTLAGAFVYNLIRS 253          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.081e-15
Identity = 65/243 (26.75%), Postives = 105/243 (43.21%), Query Frame = 1
Query:  139 EDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLV-MSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFAL 864
            +++ S    +A  AE L T + VF     + S+++  +  P+++ +S               P+SGGH+NP ++ A  +    S  RA  Y++AQ VG I GA  L  +       N ++     N                 QA+  E+I +F  L   V+ + DSR+   +G   + I +   LG LV +         + G  +NPAR  GPA++        HWVFW GP +     A+
Sbjct:    3 KEVCSAAFLKAVFAEFLATLIFVFFG---LGSALKWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNLAVNALNNNTT-------------AGQAVVAEMILTFQ-LALCVFSSTDSRRTSPVGSPALSIGLSVTLGHLVGIY--------FTGCSMNPARSFGPAVIM-SRFSSAHWVFWVGPIVGAATAAI 219          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.719e-15
Identity = 58/195 (29.74%), Postives = 87/195 (44.62%), Query Frame = 1
Query:  319 FPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSR-QAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVIPSQNLH 897
            F +SGGH+NP V+    + G  +  RA +Y+ AQ +      + L+          F  GG    V   G       G+   Q L +E+I +F  LF +  M  D R Q +A+G +   +++G              A   + GA +NPAR  GPAL  G   W  HWV+W GP +   +A  +Y  +   Q +H
Sbjct:   81 FHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLR----------FLSGGMVTPVHALGR------GISPMQGLVMEVILTFSLLFVTYAMILDPRSQVRAIGPLLTGLIVG----------ANSLAGGNFTGASMNPARSFGPALATGD--WTNHWVYWIGPLLGGPLAGFVYESLFLVQKMH 247          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.719e-15
Identity = 57/173 (32.95%), Postives = 83/173 (47.98%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            ISG H+NP V+FA  +    S  RA  Y++AQ +G + GA  L +V    +      G   LN + PG    V +G    QA  +EI  +  F+   ++  +D R+   LG V + +     LG L  +         Y GAG+NPAR   PA++     +  HWV+W GP I
Sbjct:   62 ISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVR-----GNLALNTLHPG----VSVG----QATIVEIFLTLQFVLC-IFATYDERRNGRLGSVALAVGFSLTLGHLFGMY--------YTGAGMNPARSFAPAILTRN--FTNHWVYWVGPVI 210          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.550e-15
Identity = 57/173 (32.95%), Postives = 82/173 (47.40%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            ISG H+NP V+FA  +    S  RA  Y+ AQ +G + GA  L +V    +      G   LN + P     V +G    QA  +EI  +  F+   ++  +D R+   LG V + +     LG L  +         Y GAG+NPAR   PA++ G   +  HWV+W GP I
Sbjct:   62 ISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVR-----GNLALNTLHPA----VSVG----QATTVEIFLTLQFVLC-IFATYDERRNGQLGSVALAVGFSLALGHLFGMY--------YTGAGMNPARSFAPAILTGN--FTNHWVYWVGPII 210          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.637e-15
Identity = 71/263 (27.00%), Postives = 110/263 (41.83%), Query Frame = 1
Query:  127 ILGFEDIFSVKVWRASMAELLGTAVLVF-ALDTIVISSIQTDTKTPN----------LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ++  +++    ++RA +AE + T + ++  + T++    QTD               L ++                ISGGHINP V+F   L    S  RA +Y+ AQ +G I G   +K   +   A               G    V  G  T   L  EII +FV ++ +V+ A D ++      V V   +   +G  VF+    T      G G+NPAR LG A+V      W   W+FW GP I     ALY +++
Sbjct:   28 LIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYAR------------YGGGANEVSAGYSTGTGLAAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIV 273          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.637e-15
Identity = 62/188 (32.98%), Postives = 88/188 (46.81%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWL--EIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            ISGGHINP V+F   L    S  RA +YI+AQC+G + G   +K   ++        GG           G  E+  G  +   L  EII +FV ++ +V+ A D ++      V V   +   +G  VF+    T      G G+NPAR LG A+V      W   W+FW GP I     ALY +++
Sbjct:  100 ISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDR---YGG-----------GANELAAGYSKGTGLAAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--VTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIV 268          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.637e-15
Identity = 57/173 (32.95%), Postives = 82/173 (47.40%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            ISG H+NP V+FA  +    S  RA  Y+ AQ +G + GA  L +V    +      G   LN + PG      + LG  QA  +EI  +  F+   ++  +D R+   LG V + +     LG L  +         Y GAG+NPAR   PA++     +  HWV+W GP I
Sbjct:   62 ISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVR-----GNLALNTLHPG------VSLG--QATTVEIFLTLQFVLC-IFATYDERRNGRLGSVALAVGFSLTLGHLFGMY--------YTGAGMNPARSFAPAILTRN--FTNHWVYWVGPII 210          
The following BLAST results are available for this feature:
BLAST of DY262747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
PIP23_MAIZE2.081e-1533.87Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP21_ORYSJ2.081e-1527.91Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
NIP1_NICAL2.081e-1528.16Probable aquaporin NIP-type OS=Nicotiana alata PE=... [more]
AQP5_SHEEP2.081e-1526.75Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
TIP41_MAIZE2.719e-1529.74Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
MIP_BOVIN2.719e-1532.95Lens fiber major intrinsic protein OS=Bos taurus G... [more]
MIP_HUMAN3.550e-1532.95Lens fiber major intrinsic protein OS=Homo sapiens... [more]
PIP26_MAIZE4.637e-1527.00Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP25_ORYSJ4.637e-1532.98Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
MIP_RABIT4.637e-1532.95Lens fiber major intrinsic protein OS=Oryctolagus ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262747 ID=DY262747; Name=DY262747; organism=Citrus clementina; type=EST; length=1028bp
TCGGAACTGGCCGGTGATATAGAGGGTGAATATGGTGGTAACAGAGTCCA
GCCTTTTGCTACACCAAAGCAAGAGCAGAGACTGATGGATGAAGAGAAGA
AACAGAATCCCTCCACATGGAAAAAGATTTTGGGATTTGAAGACATTTTT
TCTGTGAAAGTGTGGAGAGCATCAATGGCTGAGCTGCTTGGTACAGCAGT
GCTGGTTTTTGCACTGGACACAATTGTCATTTCCTCCATTCAAACAGACA
CAAAGACCCCAAATCTTGTAATGTCAACTTTGGTCGCAATCACAATAACA
ATCCTCCTACTTGCAACTTTTCCAATTTCTGGTGGCCACATCAACCCATT
AGTGTCCTTTGCTGCAGCACTCACTGGCATCGCGTCCTTCTCAAGGGCAG
CCATATACATTTTGGCTCAATGTGTTGGTGGCATTTTCGGTGCACTAGCG
CTGAAAGCTGTGGTGACCAACAAAATTGCACATAATTTTTCACTTGGAGG
CTGCACCCTGAATGTTGTGGTACCTGGGCCAGATGGGCTTGTTGAGATCG
GCTTGGGGACTAGGCAGGCCCTTTGGCTTGAGATAATTTGCTCGTTTGTG
TTCCTTTTTGCTTCTGTGTGGATGGCTTTTGACTCCAGACAAGCCAAGGC
TCTTGGCAGAGTTACCGTATGCATTGTCATTGGAACAGTGTTGGGTCTTC
TGGTTTTTGTCTCGACAACTGTTACTGCTCAAAAGGGCTATGCCGGAGCT
GGGCTCAACCCGGCAAGATGTTTGGGCCCAGCACTCGTTAGAGGAGGCCA
TCTCTGGGATCGCCACTGGGTTTTCTGGGCCGGGCCGGCTATCGCTTGCG
TGGCATTTGCTTTGTACACTAAGGTCATTCCAAGTCAGAATTTGCACACC
ATCAAGTGATGTAGCTTGAAATTCAATCACCCTTTATTGGCTTCTTAGGA
TTAATTTGAAGGTGTTTCATGTTTTTANGGGATTAAAAAAGTGAAATATC
TATTGAAAATTATATTTTATTGTCTAAT
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