DY262747

Overview
NameDY262747
Unique NameDY262747
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1028
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig995 contig Ccv1_Contig995:34..1061. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.349e-14
Identity = 72/242 (29.75%), Postives = 112/242 (46.28%), Query Frame = 1
Query:  142 DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLV-MSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFAL 864
            ++ S+   RA +AE L T + VF     + S++Q  +  P+++ ++                +SG HINP V+ A  +    SF RAA Y+ AQ +G + GA  L  +   +I  + ++     N    G    VE+ L T Q     ++C    +FAS     D R++  LG   + I     LG L+ +         + G  +NPAR L PA+V G   +D HWVFW GP +  V  +L
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFG---LGSALQWASSPPSVLQIAVAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLAVNALHNNATA-GQAVTVELFL-TMQL----VLC----IFAST----DERRSDNLGSPALSIGFSVTLGHLLGIY--------FTGCSMNPARSLAPAVVTG--KFDDHWVFWIGPLVGAVIGSL 217          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.762e-14
Identity = 62/186 (33.33%), Postives = 87/186 (46.77%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGH-LWDRHWVFWAGPAIACVAFALYTKVI 879
            +SGGHINP V+F   L    S  RA +YI+AQ +G I G   +K     + A     GG        G + L + G      L  EII +FV ++ +V+ A D ++      V V   +   +G  VF+    T      G G+NPAR LG A++   H  W  HW+FW GP I     A Y + +
Sbjct:  106 VSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGF---QSAFYVRYGG--------GANELSD-GYSKGTGLAAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYV 274          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.301e-14
Identity = 71/242 (29.34%), Postives = 111/242 (45.87%), Query Frame = 1
Query:  142 DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLV-MSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAIACVAFAL 864
            ++ S+   RA +AE L T + VF     + S++Q  +  P+++ ++                +SG HINP V+ A  +    SF RAA Y+ AQ +G + GA  L  +   +I  + ++     N    G    VE+ L T Q     ++C    +FAS     D R+   LG   + I     LG L+ +         + G  +NPAR L PA+V G   +D HWVFW GP +  +  +L
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFG---LGSALQWASSPPSVLQIAVAFGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLAVNALHNNATA-GQAVTVELFL-TMQL----VLC----IFAST----DERRGDNLGSPALSIGFSVTLGHLLGIY--------FTGCSMNPARSLAPAVVTG--KFDDHWVFWIGPLVGAIIGSL 217          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.301e-14
Identity = 70/254 (27.56%), Postives = 110/254 (43.31%), Query Frame = 1
Query:  142 DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVI--PSQNL 894
            ++ S+   RA +AE L T + VF      ++  Q       + M+                +SG HINP V+ A  +    SF RA  Y+ AQ +G + GA  L  +    I  + ++     N                 QA+ +E+  + + L   ++ + D R+   +G   + I     LG L+ +         Y G  +NPAR L PA+V G   +D HWVFW GP + A VA  LY  V+  P+++L
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLAIGTLVQALGH--VSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNALNNNST-------------AGQAVTVELFLT-LQLVLCIFASTDERRGDNVGTPALSIGFSVALGHLLGIH--------YTGCSMNPARSLAPAIVTG--KFDDHWVFWIGPLVGAIVASLLYNYVLFPPAKSL 230          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 2.301e-14
Identity = 72/247 (29.15%), Postives = 109/247 (44.13%), Query Frame = 1
Query:  163 WRASMAELLGTAVLVF-------ALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVI 879
            WRA +AE L   + VF         +  V ++        N+ +S                ISG H+NP V+    L+   S  RA +YI+AQCVG I  A A+ + +T+ +  N SLG    N + P        G+ + Q L +EII   + L   V    D R+    G   + I +   LG L+ +         Y G G+NPAR  G +++   H +  HW+FW GP I   +A  +Y  ++
Sbjct:   11 WRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIV-ATAILSGITSSLPDN-SLG---RNELAP--------GVNSGQGLGIEII-GTLQLVLCVLATTDRRRRDLGGSGPLAIGLSVALGHLLAID--------YTGCGINPARSFGSSVIT--HNFKDHWIFWVGPFIGGALAVLIYDFIL 233          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 3.006e-14
Identity = 59/186 (31.72%), Postives = 83/186 (44.62%), Query Frame = 1
Query:  319 FPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGP----AIACVAFAL 864
            F +SGGH+NP V+ + A+ G  +  R+A+Y+ AQ  G     L L+ +           GG         P   +  G+G  Q +  E + +F  L        D R+A   G   +      + GLLV  +T   A     GA +NPAR  GPAL  G   W  HWV+W GP     +A VA+ L
Sbjct:   79 FHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLT----------GGAAT------PVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPL------LTGLLVGANT--VAGGALTGASMNPARSFGPALATGE--WAHHWVYWVGPLAGGPLAVVAYEL 238          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.926e-14
Identity = 66/239 (27.62%), Postives = 105/239 (43.93%), Query Frame = 1
Query:  142 DIFSVKVWRASMAELLGTAVLVFAL--DTIVISSIQTDTKTPN---LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            D FSV   +A +AE + T + VFA     I  + + +D        + ++                +SGGH+NP V+   A+ G  +      Y +AQC+G     L LK V               L+V   G    V  G+   Q + +EII +F  ++     A D ++  +LG V   I IG ++G        + A   ++G  +NPAR  GPA+  G   + ++W++WAGP I
Sbjct:   11 DSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNG------------LSVPTHG----VAAGMDAIQGVVMEIIITFALVYTVYATAADPKKG-SLG-VIAPIAIGFIVG------ANILAAGPFSGGSMNPARSFGPAVASGD--FSQNWIYWAGPLI 223          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.926e-14
Identity = 74/259 (28.57%), Postives = 112/259 (43.24%), Query Frame = 1
Query:  142 DIFSVKVW---RASMAELLGTAVLVFALDTIVIS-SIQTDTKTPN--------LVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGH-LWDRHWVFWAGPAIACVAFALYTKVI 879
            ++  +K W   RA +AE + T + ++     VI    QTD             L +S                ISGGHINP V+F   L    S  RA  Y++AQC+G   G   +K  V     +N   GG   N++  G +  V +G+G       EII +FV ++ +V+ A D ++      + V   +   +G  VF+    T      G G+NPAR  G A++      WD  W+FW GP +     A Y + +
Sbjct:   27 EVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVK--VFQSTYYNRYGGGA--NMLSDGYN--VGVGVGA------EIIGTFVLVY-TVFSATDPKRNARDSHIPVLAPL--PIGFSVFMVHLATIP--ITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFV 268          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.127e-14
Identity = 65/240 (27.08%), Postives = 105/240 (43.75%), Query Frame = 1
Query:  139 EDIFSVKVWRASMAELLGTAVLVFA-----LDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            ++++     +A++AE + T + VFA     +    ++     T    +  +                ISGGH+NP V+F A + G  +  R  +Y +AQ +G       L+          FS GG     +  G  GL   G+   +AL LEI+ +F  ++     A D ++  +LG +   I IG ++G  + V         + GA +NPA   GPALV     W+  WV+W GP I
Sbjct:   12 QEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLR----------FSTGG-----LATGTFGLT--GVSVWEALVLEIVMTFGLVYTVYATAVDPKKG-SLGTIAP-IAIGFIVGANILVG------GAFDGASMNPAVSFGPALVSWS--WESQWVYWVGPLI 224          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.127e-14
Identity = 52/173 (30.06%), Postives = 78/173 (45.09%), Query Frame = 1
Query:  325 ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI 843
            ISG H+NP V+F   +    S  RA  Y+ AQ +G + GA  L +V    +  N +L               +  G+   QA  +EI  +  F+   ++  +D R+   LG V + +     LG L  +         Y GAG+NPAR   PA++     +  HWV+W GP I
Sbjct:   62 ISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLAL-------------NTLHAGVSVXQATTVEIFLTLQFVLC-IFATYDERRNGRLGSVALAVGFSLTLGHLFGMY--------YTGAGMNPARSFAPAILTRN--FTNHWVYWVGPII 210          
The following BLAST results are available for this feature:
BLAST of DY262747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
AQP2_MOUSE1.349e-1429.75Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
PIP23_ORYSJ1.762e-1433.33Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
AQP2_RAT2.301e-1429.34Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
AQP2_BOVIN2.301e-1427.56Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
AQP1_CANFA2.301e-1429.15Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
TIP42_ORYSJ3.006e-1431.72Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]
TIP_ANTMA3.926e-1427.62Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
PIP26_ARATH3.926e-1428.57Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
TIP11_ORYSJ5.127e-1427.08Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
MIP_CAVPO5.127e-1430.06Lens fiber major intrinsic protein OS=Cavia porcel... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262747 ID=DY262747; Name=DY262747; organism=Citrus clementina; type=EST; length=1028bp
TCGGAACTGGCCGGTGATATAGAGGGTGAATATGGTGGTAACAGAGTCCA
GCCTTTTGCTACACCAAAGCAAGAGCAGAGACTGATGGATGAAGAGAAGA
AACAGAATCCCTCCACATGGAAAAAGATTTTGGGATTTGAAGACATTTTT
TCTGTGAAAGTGTGGAGAGCATCAATGGCTGAGCTGCTTGGTACAGCAGT
GCTGGTTTTTGCACTGGACACAATTGTCATTTCCTCCATTCAAACAGACA
CAAAGACCCCAAATCTTGTAATGTCAACTTTGGTCGCAATCACAATAACA
ATCCTCCTACTTGCAACTTTTCCAATTTCTGGTGGCCACATCAACCCATT
AGTGTCCTTTGCTGCAGCACTCACTGGCATCGCGTCCTTCTCAAGGGCAG
CCATATACATTTTGGCTCAATGTGTTGGTGGCATTTTCGGTGCACTAGCG
CTGAAAGCTGTGGTGACCAACAAAATTGCACATAATTTTTCACTTGGAGG
CTGCACCCTGAATGTTGTGGTACCTGGGCCAGATGGGCTTGTTGAGATCG
GCTTGGGGACTAGGCAGGCCCTTTGGCTTGAGATAATTTGCTCGTTTGTG
TTCCTTTTTGCTTCTGTGTGGATGGCTTTTGACTCCAGACAAGCCAAGGC
TCTTGGCAGAGTTACCGTATGCATTGTCATTGGAACAGTGTTGGGTCTTC
TGGTTTTTGTCTCGACAACTGTTACTGCTCAAAAGGGCTATGCCGGAGCT
GGGCTCAACCCGGCAAGATGTTTGGGCCCAGCACTCGTTAGAGGAGGCCA
TCTCTGGGATCGCCACTGGGTTTTCTGGGCCGGGCCGGCTATCGCTTGCG
TGGCATTTGCTTTGTACACTAAGGTCATTCCAAGTCAGAATTTGCACACC
ATCAAGTGATGTAGCTTGAAATTCAATCACCCTTTATTGGCTTCTTAGGA
TTAATTTGAAGGTGTTTCATGTTTTTANGGGATTAAAAAAGTGAAATATC
TATTGAAAATTATATTTTATTGTCTAAT
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