DY262852

Overview
NameDY262852
Unique NameDY262852
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1316
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262852 vs. ExPASy Swiss-Prot
Match: TDPZ1_MOUSE (TD and POZ domain-containing protein 1 OS=Mus musculus GN=Tdpoz1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.100e-13
Identity = 43/139 (30.94%), Postives = 73/139 (52.52%), Query Frame = 1
Query:  436 VFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEA--CLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMDKLTKCEEYRELVEKDPRLVVEIYEAYLSXQ 846
            VF+AM ++EM+ES    IKI +++    +  + ++YT +A       +ACD+L  A+KY +  LK  CE  L   L+  N+      A  H+ ++L   AL  I     ++ +  E++ +VE  P LV E +++  S Q
Sbjct:  212 VFRAMFEHEMKESLKTPIKIHNLNPQVFKEMMGFIYTGKAPHLHSHSMACDVLPAADKYGLVSLKVLCEDALCRNLSVKNATHTLILADLHSTEKLKTQALDFIAYYASEVCETSEWKSMVESHPHLVAEAFQSLASAQ 350          
BLAST of DY262852 vs. ExPASy Swiss-Prot
Match: RDX_DROME (Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 3.581e-13
Identity = 39/138 (28.26%), Postives = 73/138 (52.90%), Query Frame = 1
Query:  436 VFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMDKLTKCEEYRELVEKDPRLVVEIYEAYLSXQV 849
            VF AM ++EMEE +   + I+DV ++ L+  + ++YT +A   E++A DLL  A+KY ++ LK  CE+ L   L+ + +      A  H+A QL    +  I  +   + +   ++ ++     L+ E + A  + Q+
Sbjct:  679 VFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNMITTHSHLIAEAFRALATQQI 816          
BLAST of DY262852 vs. ExPASy Swiss-Prot
Match: TDPZ4_MOUSE (TD and POZ domain-containing protein 4 OS=Mus musculus GN=Tdpoz4 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.677e-13
Identity = 41/139 (29.50%), Postives = 71/139 (51.08%), Query Frame = 1
Query:  436 VFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEA--CLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMDKLTKCEEYRELVEKDPRLVVEIYEAYLSXQ 846
            VF+AM +++MEE  +  ++I D+     +  + ++YT +        +ACDLL  A++Y +K LK  CE  L   L+ +N+      A  H+ + +   AL  I     +++K   +  +VE  PRLV E + +  S Q
Sbjct:  212 VFRAMFEHQMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLKDLKVMCEDALCRNLSVENAAHTLIVADLHSTEHVKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQ 350          
BLAST of DY262852 vs. ExPASy Swiss-Prot
Match: SPOLA_DANRE (Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.978e-13
Identity = 47/168 (27.98%), Postives = 81/168 (48.21%), Query Frame = 1
Query:  436 VFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLI------------------TDNMDKLTKCEEYRELVEKDPRLVVEIYEAYLSXQVNTAVLKDSPMKQ 885
            VF AM ++EMEES+   + ISDV  +  +  + ++YT +A   E++A  LL  A+KY ++ LK  CE+ L + L+ +N       A  H+A+QL   A+  I                  +++   + +   ++ +++  P LV E + A  S Q     L    +KQ
Sbjct:  224 VFNAMFEHEMEESKKNRVDISDVEPEVFKEMMGFIYTGKAPNLEKMADSLLAAADKYALERLKVMCEEALCNSLSVENVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMETAGWKSMIQSHPHLVAEAFRALASAQCPHFGLPRKRLKQ 391          
BLAST of DY262852 vs. ExPASy Swiss-Prot
Match: SPOLB_DANRE (Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.042e-12
Identity = 48/168 (28.57%), Postives = 82/168 (48.81%), Query Frame = 1
Query:  436 VFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLI------------------TDNMDKLTKCEEYRELVEKDPRLVVEIYEAYLSXQVNTAVLKDSPMKQ 885
            VF AM +++MEES+   + ISDV  D  R  + ++YT +A   E++A +LL  A+KY ++ LK  CE+ L + L+ +N       A  H+A+QL   A+  I                  +++   + +   ++ +++  P LV E + A  S Q     L    +KQ
Sbjct:  224 VFNAMFEHKMEESKKNRVDISDVEPDVFREMMVFIYTGKAPNLEKMADNLLAAADKYALERLKVLCEEALCNSLSVENVADVLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHAADIMETAGWKAMIQSHPHLVAEAFRALASAQCTPFGLPRKRLKQ 391          
BLAST of DY262852 vs. ExPASy Swiss-Prot
Match: SPOPL_HUMAN (Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.777e-12
Identity = 45/155 (29.03%), Postives = 78/155 (50.32%), Query Frame = 1
Query:  436 VFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITD---------------NMDKLTKCEE---YRELVEKDPRLVVEIYEAYLSXQ 846
            VF AM ++EMEES+   ++I+D+  +  +  + ++YT  A   +++A +LL  A+KY ++ LK  CE+ L S L+ +N       A  H+A+QL   A+  I                 N ++ T   E   ++ +++  P LV E + A  S Q
Sbjct:  224 VFNAMFEHEMEESKKNRVEINDLDPEVFKEMMRFIYTGRAPNLDKMADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNQATDIMETSGWKSMIQSHPHLVAEAFRALASAQ 378          
BLAST of DY262852 vs. ExPASy Swiss-Prot
Match: TDPZ3_MOUSE (TD and POZ domain-containing protein 3 OS=Mus musculus GN=Tdpoz3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.032e-12
Identity = 40/137 (29.20%), Postives = 72/137 (52.55%), Query Frame = 1
Query:  436 VFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEA--CLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMDKLTKCEEYRELVEKDPRLVVEIYEAYLS 840
            VF+AM ++EM+ES    I+I D+  D  +  + ++YT +A       +ACD+L  A+KY +  LK  CE  L   L+  N+      A  ++ ++L   AL  I  +  ++++  E++ + +  P LV E + +  S
Sbjct:  212 VFRAMFEHEMKESLKNPIEIMDLDLDVFKEMMGFIYTGKAPHLHSHSMACDVLPAADKYGLVGLKVLCEDVLCRNLSVKNAAHTLILAELNSTEKLKSQALDFIAIHACEVSETSEWKSMWKSHPHLVAEAFHSLAS 348          
BLAST of DY262852 vs. ExPASy Swiss-Prot
Match: SPOPL_MOUSE (Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.965e-11
Identity = 44/155 (28.39%), Postives = 77/155 (49.68%), Query Frame = 1
Query:  436 VFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITD---------------NMDKLTKCEE---YRELVEKDPRLVVEIYEAYLSXQ 846
            VF AM ++EMEE     ++I+D+  +  +  + ++YT +A   +++A +LL  A+KY ++ LK  CE+ L S L+ +N       A  H+A+QL   A+  I                 N ++ T   E   ++ +++  P LV E + A  S Q
Sbjct:  224 VFNAMFEHEMEECTKNRVEINDLDPEVFKEMMRFVYTGKAPNLDKMADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNNNQATDIMETSGWKSMIQSHPHLVAEAFRALASSQ 378          
BLAST of DY262852 vs. ExPASy Swiss-Prot
Match: KLH23_PONAB (Kelch-like protein 23 OS=Pongo abelii GN=KLHL23 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.567e-11
Identity = 38/117 (32.48%), Postives = 64/117 (54.70%), Query Frame = 1
Query:  439 FKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMDKLTKCEEYREL 789
            FKAM   +M+E     IK+S + +D L   VNY YT++  + E+    LLE A+  Q   +K  CE+FLV  L+ DN +  ++FA  H   +L + +  ++     ++ + EE+ E+
Sbjct:   62 FKAMFTADMKEKFKNKIKLSGIHHDILEGLVNYAYTSQIEITERNVQSLLEAADLLQFLSVKKACERFLVRHLDIDNCIGMHSFAEFHVCPELEKESRRILCSKFKEVWQQEEFLEI 178          
BLAST of DY262852 vs. ExPASy Swiss-Prot
Match: BAT40_CAEEL (BTB and MATH domain-containing protein 40 OS=Caenorhabditis elegans GN=bath-40 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.718e-11
Identity = 41/144 (28.47%), Postives = 75/144 (52.08%), Query Frame = 1
Query:  436 VFKAMLDN-EMEESRSGTIKISDVSYDALRAFVNYLYTA--EACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLITDNMDKLTKCEEYRELVEKDPRLVVEIYEAYLSXQVNTA 858
            VF+ ML + EM E++   I+I D S  ++RA V ++Y    ++ +D   A D++++AEKYQ+  LK  CE+ L+ +LN +N +     A ++N   L +A +     N   +     +R  +  +P L   + E  +    N++
Sbjct:  251 VFQMMLSHTEMRENQEKRIEILDFSPTSVRAMVEFIYAGVIKSDIDVYQAVDVMQIAEKYQILALKMTCEQHLLDRLNVNNVLECITHAERYNTDVLYDACVDFAIHNRQHVMALTSWRNFISDEPVLASNLLEKMVKSNDNSS 394          
The following BLAST results are available for this feature:
BLAST of DY262852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
TDPZ1_MOUSE2.100e-1330.94TD and POZ domain-containing protein 1 OS=Mus musc... [more]
RDX_DROME3.581e-1328.26Protein roadkill OS=Drosophila melanogaster GN=rdx... [more]
TDPZ4_MOUSE4.677e-1329.50TD and POZ domain-containing protein 4 OS=Mus musc... [more]
SPOLA_DANRE7.978e-1327.98Speckle-type POZ protein-like A OS=Danio rerio GN=... [more]
SPOLB_DANRE1.042e-1228.57Speckle-type POZ protein-like B OS=Danio rerio GN=... [more]
SPOPL_HUMAN1.777e-1229.03Speckle-type POZ protein-like OS=Homo sapiens GN=S... [more]
TDPZ3_MOUSE3.032e-1229.20TD and POZ domain-containing protein 3 OS=Mus musc... [more]
SPOPL_MOUSE1.965e-1128.39Speckle-type POZ protein-like OS=Mus musculus GN=S... [more]
KLH23_PONAB2.567e-1132.48Kelch-like protein 23 OS=Pongo abelii GN=KLHL23 PE... [more]
BAT40_CAEEL5.718e-1128.47BTB and MATH domain-containing protein 40 OS=Caeno... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AE10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262852 ID=DY262852; Name=DY262852; organism=Citrus clementina; type=EST; length=1316bp
CGAGAGGCTATAATTTTCATTTTACCATCAACCACCGAAACGGAAACTCT
AAGGGGAAAAAAAGATGCGGGGACGTCGGTGCCACTCGACTCGCCACCCA
GACATGTCGGGTACGGATTCGGAATCCGAAGCCGAATCCGAAACGATGCG
TTGCATCTCCTGCAGGGAGGAGTACGGGACCCGGGACGCGGGCACATGCA
AGGAGTGTTACGAGGAGGCGAGCGAGACGGAGGAGGAGCTGAAGCGAGAA
ATCGAAGATCTTAAAGCTAAAGTCGCCTTTTTAAGGTTTTGGTCTCCACT
CGATCATCATCATCATCATCATCACAGCAGTAGGTCCCACTGCGGACCTT
GTTATACCGACGTCGTTTTGGTCGCCGCCTCGGAATCCGGCCCTGCTGGC
CCCGCCGTTCCCGTCCCCGCTCATAAGGCCGTTTTGTGTTTAAAGCCATG
CTAGATAATGAAATGGAAGAAAGTCGGAGTGGCACTATAAAGATCAGTGA
TGTATCATATGATGCCCTTCGTGCATTTGTCAATTATTTGTATACTGCAG
AAGCTTGCCTTGATGAGCAATTGGCCTGTGACCTTTTGGAGTTGGCTGAA
AAATATCAGGTGAAGCATCTTAAAGCATACTGTGAGAAGTTCCTGGTATC
CAAACTGAATTGGGACAATTCTGTTGTGAACTATGCTTTTGCGCACCAGC
ACAATGCAAAGCAGTTGCTTGAAGCAGCACTGTCATTGATCACGGACAAC
ATGGACAAGCTTACCAAGTGCGAGGAGTATAGGGAGCTCGTGGAGAAGGA
TCCCCGACTTGTAGTGGAAATCTATGAAGCTTACCTTTCCNAGCAAGTGA
ATACTGCAGTCCTTAAGGATTCTCCAATGAAGCAATAGGTGTGTAAGGTT
TCTGGGTGTGCTGATCAGATCTGAAGCAAGCCCTGTATTATTTTAGAATG
GGAGATGAGTCATTGATCAGTGTTAATTACCTATGGAATGCTTTGGCTTC
CTCCCAGGGATATGTTTGAGTTTGAAGATGAAAACATAATCTGTAAGGGC
TGCTATGGCTTTGGTAGCAAAACTTTGAATACTGGAATTTCAGGGAAAAA
TAAAAAATTACCTGGGGCCATTAAGGCAATTTTGGGCATAAAAAAATTTT
TAACCCTTTTTTTATTTTCCCCGGGGTTTCTTCTAAGGGGGACCTTCTGA
AAATTTTGAGAACATTTTCCAAAAAAAACAAGGGAAAGATTTTCTGGGGA
AAAAAAAACATAAAAAGGGGTGGTGGGGGTTTTTATCCCCCCCCCTCAAA
AAAGAGGGGTGGGGGT
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