DY262857

Overview
NameDY262857
Unique NameDY262857
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1313
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY262857 vs. ExPASy Swiss-Prot
Match: B3GT2_ARATH (Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.341e-11
Identity = 48/158 (30.38%), Postives = 76/158 (48.10%), Query Frame = 1 
Query:  589 NVRASSDRLATLLAKERSNPLTCIGCMKKGHVITDPKMKWYE----KSGHLIGNEYFLHAYGPIXXXXXXXXXXXXXXRNNSLRMFSNEDVTIGSWMLAMNVHHEDNRAIC---DPRC------NSTSIAVWDIPKCSGLCNPAFRMKGAHISVGVPE 1023
            +V  +   L   L + R  P   IGCMK G V++   ++++E    K G   GN+YF HA G +              ++  L  ++NEDV++G+W + ++V H D+R +C    P C       +  +A +D   CSG+C  A R+K  H   G  E
Sbjct:  245 DVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGEN-GNKYFRHATGQLYAISRDLASYISINQH-VLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPPDCEWKAQAGNICVASFDW-SCSGICRSADRIKEVHRRCGEGE 399
The following BLAST results are available for this feature:
BLAST of DY262857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
B3GT2_ARATH3.341e-1130.38Probable beta-1,3-galactosyltransferase 2 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AF04RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262857 ID=DY262857; Name=DY262857; organism=Citrus clementina; type=EST; length=1313bp
CAACATTTTCCCTGCCTCAACTCACAATTCGCCGAAATGCCACTCTTCTC
CCACCGCCACAACTCCTCAGCTCTTCCCACCTCCACCACCACAAACTCAT
CCTACTCAGCCAAAGATCAAAAGCTCCATAAACTTAATTCTAAAATATCA
CTGCCCATTCTCCTCTTTTCACTCCTCTCCATCTTCTTCGACCTCGCTGT
CATAACCTTTGCCGTCAACGCCGTCCGCCGCCCCAGTCCCCTACCCGTCT
ACCGTTGCGGTAGATCCGAAGACACTTTCCGTGCATTCTACTCTCTATCC
GACTCCGCGATAATGGAGCTCTCCTTGATCGCCCCAAGCTTCTCGGGTTT
GTTGGAATTCAAACCGGCTTCGCTTCAGCTGATCGCCGGGCCGCTCTTCG
AAGAACGTGGTTCCCTTCTGACCCGGATGGACTCTTAAGATTAGAGCAAG
CTACCGGGATAGCATTTCGGTTTGTAATTGGGAAATCTAAAGATGCAAAG
AAGATGGCACAGCTTGAGAAAGAGATTGATAAGTACGAGATTTTAAACTC
ATAGATGTTCAGGAAGAATATTTAAAGTTTCCTTATAAAACGTAAGAGCT
TCTTCAGATCGCCTTGCAACTCTTCTTGCCAAGGAACGTAGCAATCCGCT
GACTTGCATTGGTTGTATGAAGAAAGGACATGTGATCACTGACCCTAAAA
TGAAGTGGTATGAAAAATCAGGGCACCTTATTGGAAATGAATACTTCTTG
CATGCTTATGGTCCTATATATGTTCTGTCTGCATATGTGGTGGCTTCATT
AGCTGCTGCAAGAAATAACAGTTTGAGAATGTTCAGTAATGAGGATGTAA
CTATCGGGTCATGGATGCTTGCTATGAACGTCCACCACGAAGATAACAGA
GCAATATGTGATCCTAGATGTAACTCCACATCTATAGCAGTGTGGGATAT
TCCAAAGTGCTCAGGTTTATGCAATCCAGCATTCAGAATGAAGGGAGCTC
ACATATCAGTAGGTGTTCCAGAGGTCTACATTGCCCCAGATGAAAGATAA
TTTTAACTGAACCCTGGCGGGCCACTGCTAGGCCCGAAGAAAGGAATTTC
TAAGGGTACATCCAGAAGGGTCCCTTTTGATTTTTCGGCCTTATTGAGGG
TTATTGGGATAAAAGCAAGGGTTTCCCCAAAAAACAATTCCTTTTCCAAA
ACTAAATTTGGGGCCCTTTTTGGGTTTTTAAAAAAAATTTTTTTTGGGGG
GAAAAAAAAAACACAACACCCCCCTTTTTTTGAAAAAGGGGGGGGGTGGG
GGGGGGGGGGGGG
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