DY262919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_METEP (3-deoxy-manno-octulosonate cytidylyltransferase OS=Methylobacterium extorquens (strain PA1) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 8.915e-25 Identity = 79/238 (33.19%), Postives = 118/238 (49.58%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVK----CVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +IPAR A++R KPL +I G PMI W R+ + + +VVATD + +AE + G +MT +G++R EAL+ ++ +D+VVN+QGD P I+P II V L + + +PE+ DPN VK V N A+ F+R P+ P H+G+ +Y L + L L+ E LEQL+ LE G ++ + V+ GVD L R Sbjct: 7 LIPARLAATRLPSKPLADIAGVPMIVHVWRRA-VEAGIGPVVVATDTDAVAEVIEAQGGLAVMTRPDHPSGSDRLAEALEIVDPDGNHDVVVNVQGDLPTIDPAIIAASVMPLADPQVDIATLCAVIHRPEEMDDPNVVKIIGHTVGPNRLRALAFTRARAPWGDG-------PLFHHIGLYAYRRKALARFVALPQGELEQREKLEQLRALEAGMRIDAMIVEDLPLGVDTPADLER 236
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_METC4 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=kdsB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 8.915e-25 Identity = 79/238 (33.19%), Postives = 118/238 (49.58%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVK----CVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +IPAR A++R KPL +I G PMI W R+ + + +VVATD + +AE + G +MT +G++R EAL+ ++ +D+VVN+QGD P I+P II V L + + +PE+ DPN VK V N A+ F+R P+ P H+G+ +Y L + L L+ E LEQL+ LE G ++ + V+ GVD L R Sbjct: 7 LIPARLAATRLPSKPLADIAGVPMIVHVWRRA-VEAGIGPVVVATDTDAVAEVIEARGGLAVMTRPDHPSGSDRLAEALEIVDPDGNHDVVVNVQGDLPTIDPAIIAASVMPLADPQVDIATLCAVIHRPEEMDDPNVVKIIGHTVGPNRLRALAFTRARAPWGDG-------PLFHHIGLYAYRRKALARFVALPQGELEQREKLEQLRALEAGMRIDAMIVEDLPLGVDTPADLER 236
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_RICTY (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia typhi GN=kdsB PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.164e-24 Identity = 82/242 (33.88%), Postives = 122/242 (50.41%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDI--VVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR*IIYA*EN 990 IIP+R S+R KPL I +I+R +++ A + H VATD E+IA ++ G VI+T GT+R EA + + +I ++N+QGD P IE I +++ L+ + + T V + E + V VD G A+YFSR LIP+ L HLGI + N L+ + L T L+ E LEQL++LENG + V+ VD E L++ I + EN Sbjct: 9 IIPSRLNSTRLIQKPLQLIGSITLIERVFKQVNKAN-IQHTYVATDSEEIANIIKKIGGKVILTDSDIPTGTDRTYEAFKLIPNNNNIHYIINVQGDIPFIEHRSILKIIEYLKNSEYDIV-TPVVRVDRESIEASSNVTVAVDYMGKALYFSRSLIPHGAE-------ELLYHLGIYGFRKNALEKFVSLKQTFLEKTERLEQLRILENGMTIGTCLVEDVPISVDTEEDLKKAIKFCREN 241
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_RHOP5 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=kdsB PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.164e-24 Identity = 86/242 (35.54%), Postives = 127/242 (52.48%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED-AFDPNRVKCVVDNHG----YAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAS---ETLRR 966 +IPAR A++R GKPL++I G PMI R++ A + + VATD +IA + G V+MT +G++R EAL L+ + +IVVN+QGD P I P+ I V+ L A P +T + E+ A +PN VK + A+YF+R P+ + P H+G+ +Y L+ + L P+ L+ E LEQL+ LE G ++ V VD GVD + ET RR Sbjct: 9 LIPARMAATRLPGKPLLDIAGLPMIVHVLRRAE-AADVGPVAVATDTAEIAAAVEAHGGRVVMTRADHPSGSDRVAEALGVLDPDGRIEIVVNLQGDFPTIRPDNIGAVLGPL-ADPAVDIATLCAEIHTEEEATNPNVVKVIGSPLSPARLRALYFTRATAPWGEG-------PRYHHIGLYAYRRAALQRFIALPPSALEQREKLEQLRALEAGMRIDVGIVDTVPRGVDTAADLETARR 241
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_RICPR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia prowazekii GN=kdsB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.521e-24 Identity = 78/234 (33.33%), Postives = 120/234 (51.28%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDI--VVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 IIP+R S+R KPL I +I+R +++ A + H VATD E+IA ++ VI T + GT+R EA + + ++I ++N+QGD P IE I +++ L+ + + T V + E D + V VD G A+YFSR IP+ +L HLGI + N L+ + L T L+ E LEQL++LENG + V++ VD E L++ Sbjct: 9 IIPSRLNSTRLIQKPLQLIGSITLIERVFQQVNKAN-IHHTYVATDSEEIANVIKKISGKVIFTDSNIPTGTDRAYEAFKLIPNNHNIHYIINVQGDIPFIEHRSILKIIEYLKNSEYDIV-TPVVKVDRESIEDSSNVTVAVDYTGKALYFSRSPIPHGAE-------EFLYHLGIYGFRKNALEKFVSLKQTFLEKTERLEQLRILENGMTIGTCLVENVPISVDTEEDLKK 233
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB2_BURA4 (3-deoxy-manno-octulosonate cytidylyltransferase 2 OS=Burkholderia ambifaria (strain MC40-6) GN=kdsB2 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.778e-24 Identity = 81/241 (33.61%), Postives = 120/241 (49.79%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIID---GVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGK----VNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDASETLRR 966 +IPAR+ S+R GKPLV++ G+PMI R R + A +VVA DD +IAE G MT +GT+R E + D V+N+QGDEPL+ ++ G A A A + + + D +P VK VVD+ G A+YFSR IP+ + G+ +L H+G+ Y + L+ P L+ E LEQL+ L G + V++ D G+D + + R Sbjct: 13 VIPARYGSTRLPGKPLVDLEGEPMIVRVHARVRRALPEADIVVAIDDARIAEVLDARGIRFAMTDTGHASGTDRAAEVARVSGWPDTDAVLNVQGDEPLVPTALLQAFAGFCGATAALGVATVACPIGEVALLD--EPAIVKVVVDHRGRALYFSRAAIPFCRDGRPADSAGSNGLFLRHIGLYGYTNATLQALSRAAPCELEQLEKLEQLRALWLGMPIDVMRWPDAPPAGIDTPDDVAR 251
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KPSU1_ECOLX (3-deoxy-manno-octulosonate cytidylyltransferase (Fragment) OS=Escherichia coli GN=kpsU PE=3 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 4.295e-11 Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 256 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMT 462 S+ V +IPAR+ SSR GKPL++I+GKPMIQ +ER+ + + VATDD+++ + Q FG IMT Sbjct: 2 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQAFGGKAIMT 70 The following BLAST results are available for this feature:
BLAST of DY262919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262919 ID=DY262919; Name=DY262919; organism=Citrus clementina; type=EST; length=1297bpback to top |