DY262951

Overview
NameDY262951
Unique NameDY262951
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1311
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262951 vs. ExPASy Swiss-Prot
Match: CARM1_ANOGA (Histone-arginine methyltransferase CARMER OS=Anopheles gambiae GN=CARM1 PE=1 SV=4)

HSP 1 Score: 159.073 bits (401), Expect = 5.452e-38
Identity = 93/212 (43.87%), Postives = 130/212 (61.32%), Query Frame = 2
Query:  290 SMIDGEDDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIED-AEYKD--DKIEFW--NNVYGFDMSCIKKQAMME----PLVDTVD 898
            S+ +   + +SA  YF  Y +    + M++D VRT +YQ  IY N   F++K+VLDVGAG+GILS F  +AGAA VYAVE S MA  A+Q+V +N  ++ I V+ GKIEEI+LP  +VD+IISE MGY L  E ML T L+ + KWL  DG + P +  L++    D A Y +  +K  FW     +G ++  ++  AM E    P+VDT D
Sbjct:  111 SVFNLRTEDSSASQYFQFYGYLSQQQNMMQDFVRTSTYQRAIYNNAQDFQNKIVLDVGAGSGILSFFAVQAGAAKVYAVEASNMAQYAQQLVSSNNLTDRIIVIAGKIEEIDLP-ERVDVIISEPMGYMLYNERMLETYLHGK-KWLKPDGKMYPSRGDLHVAPFTDEALYMEQYNKANFWMQTEFHGVNLVALRDAAMKEYFRQPIVDTFD 320          
BLAST of DY262951 vs. ExPASy Swiss-Prot
Match: ANM42_ARATH (Probable protein arginine N-methyltransferase 4.2 OS=Arabidopsis thaliana GN=PRMT4.2 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.343e-36
Identity = 84/198 (42.42%), Postives = 125/198 (63.13%), Query Frame = 2
Query:  308 DDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIED--AEYK----DDKIEFWNN-------VYGFDMSCIKK 862
            D +     YF +YS     ++ML D VR  +Y N ++QNK  F+ K VLDVG G+GIL+++ A+AGA  VYAVE ++MA+ A+ +V+AN   +++ V++G +E+I LP  KVD+IISEWMGYFLL E+M ++V+ ARD+WL   G++ P  A ++L  I+   A+ K    D  +  W+N        YG DM  + K
Sbjct:   27 DKEVDYAQYFCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIADRKRNDFDGAMADWHNFSDEIKSYYGVDMGVLTK 223          
BLAST of DY262951 vs. ExPASy Swiss-Prot
Match: ANM42_ORYSJ (Probable protein arginine N-methyltransferase 4.2 OS=Oryza sativa subsp. japonica GN=PRMT4.2 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.754e-36
Identity = 87/224 (38.84%), Postives = 138/224 (61.61%), Query Frame = 2
Query:  230 VAAPVDGTAIEDEAMCDADVSMIDGEDDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIED--AEYKDDKIEF----WN-------NVYGFDMSCIKK 862
            +A+  +G A    +      +++D E D  +   YF +YS+    +EML D VR  +Y + +++N   F+ KVVLDVG G+GIL+++ A+AGA  VYAVE + MA  A+++  AN  ++++ V++G +E++ LP  KVD+IISEWMGYFLL E+M ++V+ ARD+WL  DG++ P  A ++L  I    AE K + +E     WN       + YG +M+ + K
Sbjct:    1 MASLPNGAASASASAAGGGPAVVDKEVDFAN---YFCTYSYLYHQKEMLCDRVRMDAYHSAVFRNAHHFRGKVVLDVGTGSGILAIWSAQAGARKVYAVEATNMAEHARELARANDVADIVEVIQGSMEDVVLP-EKVDVIISEWMGYFLLRESMFDSVICARDRWLKPDGVMYPSHARMWLAPIRSDLAENKMEDLEIAMHDWNLFVEDTESYYGVNMNVLTK 220          
BLAST of DY262951 vs. ExPASy Swiss-Prot
Match: ANM42_ORYSI (Probable protein arginine N-methyltransferase 4.2 OS=Oryza sativa subsp. indica GN=PRMT4.2 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.103e-36
Identity = 84/204 (41.18%), Postives = 131/204 (64.22%), Query Frame = 2
Query:  290 SMIDGEDDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIED--AEYKDDKIEF----WN-------NVYGFDMSCIKK 862
            +++D E D  +   YF +YS+    +EML D VR  +Y + +++N   F+ KVVLDVG G+GIL+++ A+AGA  VYAVE + MA  A+++  AN  ++++ V++G +E++ LP  KVD+IISEWMGYFLL E+M ++V+ ARD+WL  DG++ P  A ++L  I    AE K + +E     WN       + YG +M+ + K
Sbjct:   23 AVVDKEVDFAN---YFCTYSYLYHQKEMLCDRVRMDAYHSAVFRNAHHFRGKVVLDVGTGSGILAIWSAQAGARKVYAVEATNMAEHARELARANDVADIVEVIQGSMEDVVLP-EKVDVIISEWMGYFLLRESMFDSVICARDRWLKPDGVMYPSHARMWLAPIRSDLAENKMEDLEIAMHDWNLFVEDTESYYGVNMNVLTK 222          
BLAST of DY262951 vs. ExPASy Swiss-Prot
Match: CARMB_ARATH (Probable histone-arginine methyltransferase CARM1B OS=Arabidopsis thaliana GN=CARM1B PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 5.642e-35
Identity = 94/246 (38.21%), Postives = 139/246 (56.50%), Query Frame = 2
Query:  221 DDSVAAPVDGTAIEDEAMCDADVSMIDGEDDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANG-FSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDA---EYKDDKIEFW--NNVYGFDMSCIKKQA----MMEPLVDTVDQNQLVPTARY 928
            DD+V     G+A+ +  +  A+ S  D + +  SA  YF  Y      + ML+D VRT +Y   + +N+  F  +VV+DVGAG+GILS+F A AGA HVYAVE S+MA  A++++  N   +  ITV+KGKIE+IELP  K D++ISE MG  L+ E ML T + ARD++L  +G + P    +++    D        +K  FW   N YG D++ +   A      +P+VD  D   LV  + +
Sbjct:  117 DDAVK---QGSALPNGTVVSANKSKFDDKIEAASAKMYFHYYGQLLHQQNMLQDYVRTGTYHAAVMENRSDFSGRVVVDVGAGSGILSMFAALAGAKHVYAVEASEMAEYARKLIAGNPLLAERITVIKGKIEDIELP-EKADVLISEPMGTLLVNERMLETYVIARDRFLSPNGKMFPTVGRIHMAPFADEFLFVEMANKALFWQQQNYYGVDLTPLYVSAHQGYFSQPVVDAFDPRLLVAPSMF 358          
BLAST of DY262951 vs. ExPASy Swiss-Prot
Match: CARM1_DANRE (Histone-arginine methyltransferase CARM1 OS=Danio rerio GN=carm1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 5.642e-35
Identity = 92/214 (42.99%), Postives = 127/214 (59.35%), Query Frame = 2
Query:  284 DVSMIDGEDDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAE-YKDD--KIEFW--NNVYGFDMSCIKKQAMME----PLVDTVD 898
            D S+     +++SA  YF  Y +    + M++D VRT +YQ  I QN   FKDKVVLDVG G+GILS F A+AGA  VYAVE S MA  A+ +V +N  S  + V+ GK+EE+ LP  +VDIIISE MGY L  E ML + L+A+ K+L   G + P    ++L    D + Y +   K  FW   + +G D+S ++  A+ E    P+VDT D
Sbjct:  107 DRSVFSDRTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKVVLDVGCGSGILSFFAAQAGARKVYAVEASTMAQHAEVLVNSNRLSERVVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAK-KFLKPSGKMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPIVDTFD 318          
BLAST of DY262951 vs. ExPASy Swiss-Prot
Match: CARM1_RAT (Histone-arginine methyltransferase CARM1 OS=Rattus norvegicus GN=Carm1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.642e-34
Identity = 89/212 (41.98%), Postives = 128/212 (60.38%), Query Frame = 2
Query:  290 SMIDGEDDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAE-YKDD--KIEFW--NNVYGFDMSCIKKQAMME----PLVDTVD 898
            S+     +++SA  YF  Y +    + M++D VRT +YQ  I QN   FKDK+VLDVG G+GILS F A+AGA  +YAVE S MA  A+ +V++N  ++ I V+ GK+EE+ LP  +VDIIISE MGY L  E ML + L+A+ K+L   G + P    ++L    D + Y +   K  FW   + +G D+S ++  A+ E    P+VDT D
Sbjct:  136 SVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAK-KYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFD 345          
BLAST of DY262951 vs. ExPASy Swiss-Prot
Match: CARM1_MOUSE (Histone-arginine methyltransferase CARM1 OS=Mus musculus GN=Carm1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 1.642e-34
Identity = 89/212 (41.98%), Postives = 128/212 (60.38%), Query Frame = 2
Query:  290 SMIDGEDDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAE-YKDD--KIEFW--NNVYGFDMSCIKKQAMME----PLVDTVD 898
            S+     +++SA  YF  Y +    + M++D VRT +YQ  I QN   FKDK+VLDVG G+GILS F A+AGA  +YAVE S MA  A+ +V++N  ++ I V+ GK+EE+ LP  +VDIIISE MGY L  E ML + L+A+ K+L   G + P    ++L    D + Y +   K  FW   + +G D+S ++  A+ E    P+VDT D
Sbjct:  136 SVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAK-KYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFD 345          
BLAST of DY262951 vs. ExPASy Swiss-Prot
Match: CARM1_HUMAN (Histone-arginine methyltransferase CARM1 OS=Homo sapiens GN=CARM1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 1.642e-34
Identity = 89/212 (41.98%), Postives = 128/212 (60.38%), Query Frame = 2
Query:  290 SMIDGEDDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAE-YKDD--KIEFW--NNVYGFDMSCIKKQAMME----PLVDTVD 898
            S+     +++SA  YF  Y +    + M++D VRT +YQ  I QN   FKDK+VLDVG G+GILS F A+AGA  +YAVE S MA  A+ +V++N  ++ I V+ GK+EE+ LP  +VDIIISE MGY L  E ML + L+A+ K+L   G + P    ++L    D + Y +   K  FW   + +G D+S ++  A+ E    P+VDT D
Sbjct:  135 SVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAK-KYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFD 344          
BLAST of DY262951 vs. ExPASy Swiss-Prot
Match: CARMA_ARATH (Probable histone-arginine methyltransferase CARM1A OS=Arabidopsis thaliana GN=CARM1A PE=2 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 2.144e-34
Identity = 94/247 (38.06%), Postives = 145/247 (58.70%), Query Frame = 2
Query:  221 DDSVAAPVDGTAIEDEAMCDADVSMIDGEDDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANG-FSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEY----KDDKIEFW--NNVYGFDMSCIKKQA----MMEPLVDTVDQNQLVPTARY 928
            +DSV   V G+++++  +  A+ S  D + + +SA  YF  Y      + ML+D VRT +Y   + +N   F  +VV+DVGAG+GILS+F A+AGA HVYAVE S+MA  A++++  N  F++ ITV+KGK+E+IELP  K DI+ISE MG  L+ E ML + + ARD+++   G + P    +++    D E+      +K  FW   N YG D++ +   A      +P+VD  D   LV +  +
Sbjct:  115 NDSV---VQGSSLQNGTV-SANKSKFDNKIEASSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVMENHSDFAGRVVVDVGAGSGILSMFAAQAGAKHVYAVEASEMAEYARKLIAGNPLFADRITVIKGKVEDIELP-EKADILISEPMGTLLVNERMLESYVIARDRFMTPKGKMFPTVGRIHMAPFSD-EFLFIEMANKAMFWQQQNYYGVDLTPLYGSAHQGYFSQPVVDAFDPRLLVASPMF 355          
The following BLAST results are available for this feature:
BLAST of DY262951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
CARM1_ANOGA5.452e-3843.87Histone-arginine methyltransferase CARMER OS=Anoph... [more]
ANM42_ARATH1.343e-3642.42Probable protein arginine N-methyltransferase 4.2 ... [more]
ANM42_ORYSJ1.754e-3638.84Probable protein arginine N-methyltransferase 4.2 ... [more]
ANM42_ORYSI5.103e-3641.18Probable protein arginine N-methyltransferase 4.2 ... [more]
CARMB_ARATH5.642e-3538.21Probable histone-arginine methyltransferase CARM1B... [more]
CARM1_DANRE5.642e-3542.99Histone-arginine methyltransferase CARM1 OS=Danio ... [more]
CARM1_RAT1.642e-3441.98Histone-arginine methyltransferase CARM1 OS=Rattus... [more]
CARM1_MOUSE1.642e-3441.98Histone-arginine methyltransferase CARM1 OS=Mus mu... [more]
CARM1_HUMAN1.642e-3441.98Histone-arginine methyltransferase CARM1 OS=Homo s... [more]
CARMA_ARATH2.144e-3438.06Probable histone-arginine methyltransferase CARM1A... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BF09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262951 ID=DY262951; Name=DY262951; organism=Citrus clementina; type=EST; length=1311bp
CCAAACTGAAACCAAAAAGCTATACCCGCACGCCCATAAACCCTAAACGA
AAATTCTTCGAAAACCCTAGTCGATGGGCCGTCGCAAGAACAACAAGAGC
AGCGACAACAACGAAAGCTCAACGAAAGTCTCCGACTCTAATCCCGATCG
GCAGCAACACAACACTATTACTCGCTTCGCAGACGCGGAAGAAGACGACG
CCACTGCGAGCTCCATTCTCGATGATTCGGTTGCGGCGCCCGTCGATGGC
ACTGCTATCGAAGATGAGGCCATGTGCGACGCTGACGTGTCGATGATTGA
CGGCGAAGACGATAAGACCAGCGCCGATTATTACTTCGATTCTTACTCTC
ACTTTGGTATTCATGAAGAAATGCTAAAGGATGTAGTGAGAACTAAGTCA
TATCAAAATGTTATTTATCAGAACAAGTTTCTTTTCAAGGACAAAGTAGT
TCTTGATGTTGGAGCCGGGACTGGAATTTTATCCTTATTTTGTGCAAAAG
CAGGGGCAGCTCATGTTTATGCAGTTGAGTGCTCCCAAATGGCTAACATG
GCTAAACAGATTGTCGAAGCAAATGGATTTTCTAATGTTATAACAGTTTT
AAAAGGGAAGATTGAAGAAATTGAGCTCCCAGTTACAAAAGTGGATATAA
TTATTTCAGAGTGGATGGGTTATTTTTTGTTGTTCGAGAACATGCTAAAC
ACAGTCTTGTATGCTCGTGATAAATGGCTAGTTGATGATGGAATTGTGTT
ACCAGATAAAGCTTCTCTCTATTTGACAGCCATTGAAGATGCTGAGTACA
AAGATGACAAGATTGAATTTTGGAATAACGTCTATGGCTTTGACATGAGC
TGCATCAAGAAGCAAGCTATGATGGAACCTCTTGTTGACACAGTTGATCA
GAATCAATTGGTACCAACTGCCCGCTACTCAGGACAATGGATATCTCCAA
GATGGGACGGGGGGATGCTTCTTTACGGCTCCATTTAAACTTGTGGGACA
ACTAATGAATACATCCATGCTCTTGGAGCAAAATTTGGACTAACCCTTTA
CAAAGTGCCCCAAATTAGGGGGTTTCCAAAGGGGCCAAAACTCCGGGCTA
CACTTGGAAGCAAACAGTCTTTTTTTGGGAAAATTTTAACTTTTTGGGGG
GGGGGGGGGAAAAAGGGGGGGGTTGGGGGGTGGGGGCCCAAAAAAAAAAA
AAACCCCAAAAAGGTGTAAATAAAGGGGGGAAAAAAATTTTTTGTGGGGG
GGGGGGGGGGGTTTTTTGGGTTTTTTTTTTCCGGGAAGTCCCCAAATAAT
AATAAAAAAAG
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