DY262954

Overview
NameDY262954
Unique NameDY262954
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1192
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUNF_CLOTH (Endoglucanase F OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=celF PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 4.498e-44
Identity = 95/244 (38.93%), Postives = 136/244 (55.74%), Query Frame = 1
Query:   61 LPTLLIAAVVGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDS-MPPHELRNALVAVRWATDYLLKIVSQPNRIFVQVGDPNIDHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTY 789
            +P  +++     +YG+AL K+I+F+E QRSG LP+++R  WRG+S L+DG     DL GG+YDAGD+VKFN PM++  T+L+WS+ E  D+ +   +L   L  ++WATDY +K    PN  + QVGD  +DH+ W   E M   R  + VD  N  S V              F+ +D  YA TLLR+A + F FAD+ R            A  +Y    G+ DEL W + WL  A+ D +Y
Sbjct:   19 IPQAVVSFAADFNYGEALQKAIMFYEFQRSGKLPENKRNNWRGDSALNDGADNGLDLTGGWYDAGDHVKFNLPMAYAVTMLAWSVYESRDAYVQSGQLPYILDNIKWATDYFIKCHPSPNVYYYQVGDGALDHSWWGPAEVMQMPRPSFKVDLTNPGSTVVAETAAAMAASSIVFKPTDPEYAATLLRHAKELFTFADTTRSDAGYR-----AAEGYYSSHSGFYDELTWASIWLYLATGDQSY 257          
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUNZ_CLOSR (Endoglucanase Z OS=Clostridium stercorarium GN=celZ PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 5.875e-44
Identity = 95/262 (36.26%), Postives = 145/262 (55.34%), Query Frame = 1
Query:   31 MKKKLRFSFLLPTLLI--------AAVVGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMP-PHELRNALVAVRWATDYLLKIVSQPNRIFVQVGDPNIDHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTY 789
            M+K   F+ ++  L+         A   G++YG+AL K+I+F+E QRSG LP+++R  WRG+SGL+DG     DL GG+YDAGD+VKFN PM+++ T+L+W+  E  +++    ++   L A++W +DYL+K    PN  + QVGD ++DH+ W   E M  +R  Y VD  N  S V              F   D  YA T +++A + + FA+      + + +    A  FY    G+ DEL W   WL  A+ D+TY
Sbjct:    1 MRKFYSFAIIISLLVTGLFIHTPKAEAAGYNYGEALQKAIMFYEFQRSGKLPENKRDNWRGDSGLNDGADVGLDLTGGWYDAGDHVKFNLPMAYSQTMLAWAAYEAEEALERSGQMGYLLDAIKWVSDYLIKCHPSPNVFYYQVGDGHLDHSWWGPAEVMQMDRPAYKVDLANPGSTVVAEAAAALASAAVVFADRDPAYAATCIQHAKELYNFAE-----ITKSDSGYTAASGFYDSHSGFYDELSWAGVWLYLATGDETY 257          
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUNG_CLOCE (Endoglucanase G OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=celCCG PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 2.310e-40
Identity = 112/303 (36.96%), Postives = 145/303 (47.85%), Query Frame = 1
Query:   52 SFLLPTLLIAAVVGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPPH-ELRNALVAVRWATDYLLKIVSQPNRIFVQVGDPNIDHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTY----PYYIEMNGKHLVLMKILMIWAGT*ACWHKCSSLQGRLKANE*TLQSYKASPE 945
            SF+  T   AA   ++YG+AL KSI+F+E QRSG LP D+R  WR +SG+ DG     DL GG+YDAGD+VKFN PMS+T+ +L+WS+ E  D+     + +  +  ++WA DY +K    P   + QVGD   DH+ W   E M  ER  + VDA    S V              F+SSD  YAE  + +A   F  AD    A SD       A   Y     + D+L W A WL  A+ D TY      Y+   GK      I   W     CW         L A     Q YK S E
Sbjct:   26 SFIPQTNTYAAGT-YNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADK---AKSDAGYT---AASGYYSSSSFYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIAYKWG---QCWDDVHYGAELLLAKLTNKQLYKDSIE 318          
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUNI_CLOTH (Endoglucanase 1 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=celI PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 5.147e-40
Identity = 90/233 (38.63%), Postives = 128/233 (54.94%), Query Frame = 1
Query:   97 DYGDALSKSILFFEGQRSGYL-PQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPPH-ELRNALVAVRWATDYLLKIVSQPNRIFVQVGDPNIDHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTY 789
            +YG+AL K+I F+E QRSG L P   RL WRG+SGL DG     DL GG+YDAGD+VKFN PMS++  +L W++ E+ D+     +  + L  ++WA DY +K   + +  + QVGD + DH  W   E M  ER  Y VD  +  S V              F+  D  Y++  L++A + F+FAD+ +    D     +G   FY  + G+ DEL W A WL  A+ D +Y
Sbjct:   77 NYGEALQKAIFFYECQRSGKLDPSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAVYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKS--DDGYTAANG---FYNSWSGFYDELSWAAVWLYLATNDSSY 304          
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUN6_DICDI (Endoglucanase OS=Dictyostelium discoideum GN=celA PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.402e-37
Identity = 91/252 (36.11%), Postives = 134/252 (53.17%), Query Frame = 1
Query:   58 LLPTLLIAAVVGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNT-------DLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPPHELRNA-LVAVRWATDYLLKIVSQPNRIFVQVGDPNIDHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTY 789
            LL T LI A    DY   L  +++F++  R+G LP D  + WRGNS L+D    +        +L GGY+DAGD VKF  PM+++ T+L WS IE+  ++    L +  L  +++ TD+L+   +  N    QVGD N+DH+ W  PEDM   R  Y +      +++              F+SS+  YA T L +A     F  +YRG YSD+      A  FY  + GY+D+L+WG+ WL +A+QD  Y
Sbjct:   15 LLSTQLINADT--DYCSLLENALMFYKMNRAGRLP-DNDIPWRGNSALNDASPNSAKDANGDGNLSGGYFDAGDGVKFGLPMAYSMTMLGWSFIEYESNIAQCGLTSLYLDTIKYGTDWLIAAHTADNEFAGQVGDGNVDHSWWGPPEDMTMARPTYMLTTEAPGTEIAMEAASALAAASIAFKSSNPTYAATCLAHAKTLHNFGYTYRGVYSDSIT---NAQAFYNSWSGYKDDLVWGSIWLYKATQDSDY 260          
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUN10_ORYSJ (Endoglucanase 10 OS=Oryza sativa subsp. japonica GN=GLU2 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 3.452e-36
Identity = 95/247 (38.46%), Postives = 136/247 (55.06%), Query Frame = 1
Query:  100 YGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNT---DLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPP-HELRNALVAVRWATDYLLKIVSQP----NRIFVQVG---------DPNIDHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTY 789
            Y  AL K+++FF  QRSG LP+   ++WRGNS + DG + +T    LVGG+YDAGD +KFN+PM+++ T+LSWS+IE+        EL +    ++W TDYLLK  +      +RI  QVG          PN DH CW RPED+D  R V      ++ SD+              F+ S + Y++ L+R A   ++F    RG YS  PN  D A   + +   Y DE +WG AW+  A+ ++TY
Sbjct:  110 YTQALHKALMFFNAQRSGPLPKHNGVSWRGNSCMKDGLSDSTVRKSLVGGFYDAGDAIKFNYPMAWSMTMLSWSVIEYKAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVGVGDTSKGGAQPN-DHYCWMRPEDIDYPRPVTEC---HSCSDLASEMAAALAAASIVFKDSKT-YSDKLVRGAKALYKFGRLQRGRYS--PNGSDQA--IFYNSTSYWDEFVWGGAWMYFATGNNTY 347          
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUN25_ARATH (Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 5.889e-36
Identity = 98/267 (36.70%), Postives = 137/267 (51.31%), Query Frame = 1
Query:   67 TLLIAAVVGH--------DYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDG----WTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSM-PPHELRNALVAVRWATDYLLKIVSQP----NRIFVQVG---------DPNIDHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTY 789
            TL++  V  H        +Y  AL K++ FF  Q+SG LP+   ++WRGNSGL DG     ++  DLVGGYYDAGD +KFNFPM++  T+LSWS+IE+        EL +    ++W TDY LK  +      + +  QVG         DPN DH CW RPEDMD +R V   +     SD+              F+ +   Y++ L+  A   +QF  + RG YS        +  FY +   Y DE +WG AW+  A+ + TY
Sbjct:   90 TLIVKTVPRHHPKTPPPDNYTIALHKALKFFNAQKSGKLPKHNNVSWRGNSGLQDGKGETGSFYKDLVGGYYDAGDAIKFNFPMAYAMTMLSWSVIEYSAKYEAAGELTHVKELIKWGTDYFLKTFNSTADSIDDLVSQVGSGNTDDGNTDPN-DHYCWMRPEDMDYKRPVTTCN--GGCSDLAAEMAAALASASIVFKDNKE-YSKKLVHGAKVVYQFGRTRRGRYSAG---TAESSKFY-NSSMYWDEFIWGGAWMYYATGNVTY 348          
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUN12_ORYSJ (Endoglucanase 12 OS=Oryza sativa subsp. japonica GN=GLU3 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 7.691e-36
Identity = 93/246 (37.80%), Postives = 131/246 (53.25%), Query Frame = 1
Query:  100 YGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNT---DLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPP-HELRNALVAVRWATDYLL----KIVSQPNRIFVQVGDPNI------DHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQFADS--YRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTY 789
            Y DAL K++LFF  Q+SG LP++  + WRGNSGLSDG         LVGGYYDAGDN+KF+FP++F+ T+LSWS+IE+        E  +    ++W TDYLL       S  ++++ QVG   I      DH CW RPEDM   R    V    +A D+              FR  ++ Y++ L+  A   ++FA S   R  YS      +    +Y +   Y DE +W AAW+  A+ ++TY
Sbjct:  111 YTDALHKALLFFNAQKSGRLPKNNGIKWRGNSGLSDGSDLTDVKGGLVGGYYDAGDNIKFHFPLAFSMTMLSWSVIEYSAKYKAVGEYDHVRELIKWGTDYLLLTFNSSASTIDKVYSQVGIAKINGTQPDDHYCWNRPEDMAYPR---PVQTAGSAPDLGGEMAAALAAASIVFR-DNAAYSKKLVNGAAAVYKFARSSGRRTPYSRGNQYIE----YYYNSTSYWDEYMWSAAWMYYATGNNTY 348          
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUN9_ORYSJ (Endoglucanase 9 OS=Oryza sativa subsp. japonica GN=GLU1 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 8.503e-35
Identity = 92/248 (37.10%), Postives = 130/248 (52.42%), Query Frame = 1
Query:   97 DYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWT---YNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPP-HELRNALVAVRWATDYLLKIVSQP----NRIFVQVG---------DPNIDHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTY 789
            D+  AL K+++FF  Q+SG LP++  + WRGNS + DG +       LVGGYYDAGD VKFNFP +F+ TLLSWS+IE+        EL +    ++W  DY LK  +      +R+ +QVG          PN DH CW RPED+D  R V      +A SD+              F+  +  Y++ L+  A   F+FA   RG YS   +    A  FY +   Y DE +WG +W+  A+ + +Y
Sbjct:  111 DFTVALRKALMFFNAQKSGKLPKNNNVHWRGNSCMKDGLSDPAVGRSLVGGYYDAGDAVKFNFPAAFSMTLLSWSVIEYSAKYEAVGELGHIRDTIKWGADYFLKTFNSTADTIDRVVMQVGSGATSPGSTQPN-DHYCWMRPEDIDYPRPVVEC---HACSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGATTLFKFARQNRGRYSAGGS---DAAKFY-NSTSYWDEFVWGGSWMYLATGNSSY 349          
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUNA_CALSA (Endoglucanase A OS=Caldocellum saccharolyticum GN=celA PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 4.220e-34
Identity = 83/232 (35.78%), Postives = 119/232 (51.29%), Query Frame = 1
Query:   97 DYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDS-MPPHELRNALVAVRWATDYLLKIVSQPNRIFVQVGDPNIDHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTY 789
            +YG+AL K+I+F+E Q SG LP   R  WRG+S L DG     DL GG++DAGD+VKFN PMS+T T+LSW+  E+ D+ +   +L + L  + W  DY +K        + QVGD   DH  W   E M  ER  + V   +  S V               +  +   A T L++A   ++FA+      + + +    A  +Y  + G+ DEL W A WL  A+ D TY
Sbjct:   27 NYGEALQKAIMFYEFQMSGKLPNWVRNNWRGDSALKDGQDNGLDLTGGWFDAGDHVKFNLPMSYTGTMLSWAAYEYKDAFVKSGQLEHILNQIEWVNDYFVKCHPSKYVYYYQVGDGGKDHAWWGPAEVMQMERPSFKVTQSSPGSAVVAETAASLAAASIVLKDRNPTKAATYLQHAKDLYEFAE-----VTKSDSGYTAANGYYNSWSGFYDELSWAAVWLYLATNDSTY 253          
The following BLAST results are available for this feature:
BLAST of DY262954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GUNF_CLOTH4.498e-4438.93Endoglucanase F OS=Clostridium thermocellum (strai... [more]
GUNZ_CLOSR5.875e-4436.26Endoglucanase Z OS=Clostridium stercorarium GN=cel... [more]
GUNG_CLOCE2.310e-4036.96Endoglucanase G OS=Clostridium cellulolyticum (str... [more]
GUNI_CLOTH5.147e-4038.63Endoglucanase 1 OS=Clostridium thermocellum (strai... [more]
GUN6_DICDI1.402e-3736.11Endoglucanase OS=Dictyostelium discoideum GN=celA ... [more]
GUN10_ORYSJ3.452e-3638.46Endoglucanase 10 OS=Oryza sativa subsp. japonica G... [more]
GUN25_ARATH5.889e-3636.70Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE... [more]
GUN12_ORYSJ7.691e-3637.80Endoglucanase 12 OS=Oryza sativa subsp. japonica G... [more]
GUN9_ORYSJ8.503e-3537.10Endoglucanase 9 OS=Oryza sativa subsp. japonica GN... [more]
GUNA_CALSA4.220e-3435.78Endoglucanase A OS=Caldocellum saccharolyticum GN=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BF12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262954 ID=DY262954; Name=DY262954; organism=Citrus clementina; type=EST; length=1192bp
CTTCATTACCCACAAGACCCACCGGCCACCATGAAGAAGAAGCTCCGATT
TTCATTTCTATTGCCTACTCTACTCATCGCGGCTGTTGTTGGCCACGACT
ACGGCGACGCATTGTCCAAGTCGATCCTCTTCTTCGAAGGCCAGCGCTCG
GGTTACCTGCCGCAGGACCAGCGCCTCGCTTGGCGTGGCAATTCCGGCCT
CAGCGATGGCTGGACGTACAACACCGACCTGGTTGGCGGCTACTACGACG
CCGGCGATAACGTCAAGTTCAATTTCCCCATGTCATTCACCACCACTCTC
TTATCTTGGAGCATCATCGAATTCGGAGACTCCATGCCTCCCCATGAGCT
GAGAAATGCACTCGTCGCTGTCCGCTGGGCCACTGATTATCTCCTCAAGA
TCGTTTCTCAGCCTAATCGGATTTTTGTCCAGGTGGGGGATCCTAATATT
GATCACAACTGTTGGGAGAGACCAGAGGATATGGACACAGAAAGGACTGT
GTATGCAGTTGATGCACCAAATGCAGCTTCTGATGTAGCTGGCGAGACTG
CAGCCGCTCTAGCAGCTGCATCCATGGCGTTCCGGTCTTCGGACTCGGGA
TACGCAGAGACATTGCTGAGAAATGCTGTCAAGGCGTTTCAATTTGCAGA
CAGTTACAGGGGAGCTTATAGTGACAACCCTAATATCAGAGATGGTGCCT
GCCCATTTTACTGTGACTTTGATGGATACCAAGATGAGTTGCTTTGGGGA
GCAGCTTGGTTAAAAAGAGCTTCTCAGGATGACACTTACCCTTATTACAT
TGAAATGAATGGCAAACACTTGGTGCTGATGAAAATATTAATGATTTGGG
CTGGGACATAAGCATGCTGGCATAAATGTTCTAGTCTCCAGGGAAGACTA
AAAGCTAACGAGTAAACTCTGCAATCATACAAAGCCTCACCTGAAACCTT
CATGTGCCCGTTAGTCCCCGAAATCATCCTCCTCCCACTCCGATTACAGC
CCCCGGGGGCCAAATCAACAACCTGGGGGGCAGCAACCTGCGACAAGGCC
CAAACCCTTTCCTTTTCTGCCTTCGGGTTTTTGCAAATTTCCTAAACCCA
AAATTTCCCAAACTCGGTTACTTGGGGGCAACCCTTTTAGTTTTCCCCCC
CCTTTCCCCTTCTCCTTGGGGAACCCACAAAAAACAAAGTTT
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